RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 IGHV3-30-3P0DP02 117 aa6.33□□□□□ -1.4
SNCA-201ENST00000336904 EIF4EBP3O60516 100 aaPredicted RBP6.33□□□□□ -1.4
SNCA-201ENST00000336904 NTM-AS1Q6ZSK4 140 aa6.33□□□□□ -1.4
SNCA-201ENST00000336904 CDKN2A-AS1Q9UH64 79 aa6.33□□□□□ -1.4
SNCA-201ENST00000336904 TEX48A0A1B0GUV7 120 aa6.33□□□□□ -1.4
SNCA-201ENST00000336904 PSMB2P49721 201 aa6.33□□□□□ -1.4
SNCA-201ENST00000336904 HILS1P60008 231 aa6.33□□□□□ -1.4
SNCA-201ENST00000336904 TIMM21Q9BVV7 248 aa6.33□□□□□ -1.4
SNCA-201ENST00000336904 A4D1N5 150 aa6.32□□□□□ -1.4
SNCA-201ENST00000336904 RS1O15537 224 aa6.32□□□□□ -1.4
SNCA-201ENST00000336904 TSPAN13O95857 204 aa6.32□□□□□ -1.4
SNCA-201ENST00000336904 RRN3P1Q2M238 152 aa6.32□□□□□ -1.4
SNCA-201ENST00000336904 ETDBQ3ZM63 59 aa6.32□□□□□ -1.4
SNCA-201ENST00000336904 IGLV1-51P01701 117 aa6.32□□□□□ -1.4
SNCA-201ENST00000336904 FOSL1P15407 271 aa6.32□□□□□ -1.4
SNCA-201ENST00000336904 INSL3P51460 131 aa6.32□□□□□ -1.4
SNCA-201ENST00000336904 ADAMTSL4-AS1Q5T5F5 129 aa6.32□□□□□ -1.4
SNCA-201ENST00000336904 MUSTN1Q8IVN3 82 aa6.32□□□□□ -1.4
SNCA-201ENST00000336904 PTH2Q96A98 100 aa6.32□□□□□ -1.4
SNCA-201ENST00000336904 C19orf73Q9NVV2 129 aa6.32□□□□□ -1.4
SNCA-201ENST00000336904 IGHV3-30P01768 117 aa6.31□□□□□ -1.4
SNCA-201ENST00000336904 CFC1BP0CG36 223 aa6.31□□□□□ -1.4
SNCA-201ENST00000336904 CFC1P0CG37 223 aa6.31□□□□□ -1.4
SNCA-201ENST00000336904 IGHV3-30-5P0DP03 117 aa6.31□□□□□ -1.4
SNCA-201ENST00000336904 PCP4P48539 62 aa6.31□□□□□ -1.4
SNCA-201ENST00000336904 GEMIN7Q9H840 131 aaKnown RBP6.31□□□□□ -1.4
SNCA-201ENST00000336904 FBN1P35555 2871 aaKnown RBP6.31□□□□□ -1.4
SNCA-201ENST00000336904 PLAC8L1A1L4L8 177 aa6.31□□□□□ -1.4
SNCA-201ENST00000336904 NFE4Q86UQ8 179 aa6.31□□□□□ -1.4
SNCA-201ENST00000336904 MAST4O15021 2626 aa6.31□□□□□ -1.4
SNCA-201ENST00000336904 CRLF1O75462 422 aa6.31□□□□□ -1.4
SNCA-201ENST00000336904 PAPPA-AS1Q5QFB9 102 aa6.31□□□□□ -1.4
SNCA-201ENST00000336904 TMEM263Q8WUH6 116 aaKnown RBP6.31□□□□□ -1.4
SNCA-201ENST00000336904 TRGV4A0A0C4DH28 118 aa6.3□□□□□ -1.4
SNCA-201ENST00000336904 K7EQD1 137 aa6.3□□□□□ -1.4
SNCA-201ENST00000336904 LEPROTO15243 131 aa6.3□□□□□ -1.4
SNCA-201ENST00000336904 GAGE6Q13070 117 aa6.3□□□□□ -1.4
SNCA-201ENST00000336904 BEAN1Q3B7T3 259 aa6.3□□□□□ -1.4
SNCA-201ENST00000336904 A0A0J9YXY3 114 aa6.3□□□□□ -1.4
SNCA-201ENST00000336904 TAL2Q16559 108 aa6.3□□□□□ -1.4
SNCA-201ENST00000336904 CLPSL2Q6UWE3 100 aa6.3□□□□□ -1.4
SNCA-201ENST00000336904 NDUFA11Q86Y39 141 aa6.3□□□□□ -1.4
SNCA-201ENST00000336904 Q1RN00 199 aa6.29□□□□□ -1.4
SNCA-201ENST00000336904 NDUFA12Q9UI09 145 aa6.29□□□□□ -1.4
SNCA-201ENST00000336904 NOTCH1P46531 2555 aa6.29□□□□□ -1.4
SNCA-201ENST00000336904 RPL36AP83881 106 aaKnown RBP6.29□□□□□ -1.4
SNCA-201ENST00000336904 RPL36ALQ969Q0 106 aaKnown RBP6.29□□□□□ -1.4
SNCA-201ENST00000336904 TRAV25A0A0B4J276 109 aa6.28□□□□□ -1.4
SNCA-201ENST00000336904 SCGB1C2P0DMR2 95 aa6.28□□□□□ -1.4
SNCA-201ENST00000336904 UBE2D1P51668 147 aa6.28□□□□□ -1.4
SNCA-201ENST00000336904 MRPS36P82909 103 aaKnown RBP6.28□□□□□ -1.4
SNCA-201ENST00000336904 OR5A1Q8NGJ0 315 aa6.28□□□□□ -1.4
SNCA-201ENST00000336904 C11orf68Q9H3H3 251 aaKnown RBP6.28□□□□□ -1.4
SNCA-201ENST00000336904 C16orf95Q9H693 158 aa6.28□□□□□ -1.4
SNCA-201ENST00000336904 DEFB135Q30KP9 77 aa6.28□□□□□ -1.4
SNCA-201ENST00000336904 CSNK1G2-AS1Q8NCQ2 148 aa6.28□□□□□ -1.4
SNCA-201ENST00000336904 IL17DQ8TAD2 202 aa6.28□□□□□ -1.4
SNCA-201ENST00000336904 CBY1Q9Y3M2 126 aa6.28□□□□□ -1.4
SNCA-201ENST00000336904 TMEM238LA0A1B0GVL6 79 aa6.27□□□□□ -1.41
SNCA-201ENST00000336904 A0A1B0GWB2 263 aa6.27□□□□□ -1.41
SNCA-201ENST00000336904 A6NJY4 79 aa6.27□□□□□ -1.41
SNCA-201ENST00000336904 K7ERU9 68 aa6.27□□□□□ -1.41
SNCA-201ENST00000336904 TCL1BO95988 128 aa6.27□□□□□ -1.41
SNCA-201ENST00000336904 TEX29Q8N6K0 151 aa6.27□□□□□ -1.41
SNCA-201ENST00000336904 Q8N3U1 123 aa6.27□□□□□ -1.41
SNCA-201ENST00000336904 TMEM101Q96IK0 257 aa6.27□□□□□ -1.41
SNCA-201ENST00000336904 VSIG2Q96IQ7 327 aa6.27□□□□□ -1.41
SNCA-201ENST00000336904 TOMM7Q9P0U1 55 aa6.27□□□□□ -1.41
SNCA-201ENST00000336904 PYGO1Q9Y3Y4 419 aa6.27□□□□□ -1.41
SNCA-201ENST00000336904 IGLV4-60A0A075B6I1 120 aa6.26□□□□□ -1.41
SNCA-201ENST00000336904 IGHV1-58A0A0C4DH39 117 aa6.26□□□□□ -1.41
SNCA-201ENST00000336904 LINC00242Q5T6M2 205 aa6.26□□□□□ -1.41
SNCA-201ENST00000336904 TRAV4A0A0B4J268 109 aa6.26□□□□□ -1.41
SNCA-201ENST00000336904 UBE2L6O14933 153 aa6.26□□□□□ -1.41
SNCA-201ENST00000336904 SMCPP49901 116 aaPredicted RBP6.26□□□□□ -1.41
SNCA-201ENST00000336904 UBE2D3P61077 147 aa6.26□□□□□ -1.41
SNCA-201ENST00000336904 UBE2D2P62837 147 aa6.26□□□□□ -1.41
SNCA-201ENST00000336904 Q9H8V8 135 aa6.26□□□□□ -1.41
SNCA-201ENST00000336904 SPANXA1Q9NS26 97 aa6.26□□□□□ -1.41
SNCA-201ENST00000336904 LITAFQ99732 161 aa6.25□□□□□ -1.41
SNCA-201ENST00000336904 CHCHD5Q9BSY4 110 aa6.25□□□□□ -1.41
SNCA-201ENST00000336904 HTN3P15516 51 aa6.25□□□□□ -1.41
SNCA-201ENST00000336904 C16orf74Q96GX8 76 aa6.25□□□□□ -1.41
SNCA-201ENST00000336904 PRO1854Q9UHT4 67 aa6.25□□□□□ -1.41
SNCA-201ENST00000336904 TINCRA0A1B0GVN0 87 aa6.25□□□□□ -1.41
SNCA-201ENST00000336904 SPANXB1Q9NS25 103 aaPredicted RBP6.25□□□□□ -1.41
SNCA-201ENST00000336904 TENM3Q9P273 2699 aa6.24□□□□□ -1.41
SNCA-201ENST00000336904 G3V4G9 280 aa6.24□□□□□ -1.41
SNCA-201ENST00000336904 FHL2Q14192 279 aa6.24□□□□□ -1.41
SNCA-201ENST00000336904 DNAJC30Q96LL9 226 aa6.24□□□□□ -1.41
SNCA-201ENST00000336904 EDA2RQ9HAV5 297 aa6.24□□□□□ -1.41
SNCA-201ENST00000336904 PRO0461Q9UI25 63 aa6.24□□□□□ -1.41
SNCA-201ENST00000336904 TMEM238C9JI98 176 aa6.23□□□□□ -1.41
SNCA-201ENST00000336904 TMEM262E9PQX1 116 aa6.23□□□□□ -1.41
SNCA-201ENST00000336904 GYPEP15421 78 aa6.23□□□□□ -1.41
SNCA-201ENST00000336904 C5orf38Q86SI9 138 aa6.23□□□□□ -1.41
SNCA-201ENST00000336904 TMEM243Q9BU79 118 aa6.23□□□□□ -1.41
SNCA-201ENST00000336904 GTSF1LQ9H1H1 148 aa6.23□□□□□ -1.41
SNCA-201ENST00000336904 CIDEAO60543 219 aa6.23□□□□□ -1.41
SNCA-201ENST00000336904 IGHV3-33P01772 117 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms