RNA–Protein interactions for RNA: ENST00000333617.8

LSAMP-201, Transcript of limbic system associated membrane protein, humanhuman

TSL 2

Gene LSAMP, Length 1,561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-201ENST00000333617 TAX1BP3O14907 124 aa6.22□□□□□ -1.41
LSAMP-201ENST00000333617 CIDEAO60543 219 aa6.22□□□□□ -1.41
LSAMP-201ENST00000333617 GAGE7O76087 117 aa6.22□□□□□ -1.41
LSAMP-201ENST00000333617 NPSP0C0P6 89 aa6.22□□□□□ -1.41
LSAMP-201ENST00000333617 GAGE12FP0CL80 117 aa6.22□□□□□ -1.41
LSAMP-201ENST00000333617 GAGE12GP0CL81 117 aa6.22□□□□□ -1.41
LSAMP-201ENST00000333617 GAGE12IP0CL82 117 aa6.22□□□□□ -1.41
LSAMP-201ENST00000333617 RPL36AP83881 106 aaKnown RBP6.22□□□□□ -1.41
LSAMP-201ENST00000333617 TMEM170BQ5T4T1 132 aa6.22□□□□□ -1.41
LSAMP-201ENST00000333617 Q6ZVH6 145 aa6.22□□□□□ -1.41
LSAMP-201ENST00000333617 NFE4Q86UQ8 179 aa6.22□□□□□ -1.41
LSAMP-201ENST00000333617 ZNRF2Q8NHG8 242 aa6.22□□□□□ -1.41
LSAMP-201ENST00000333617 SPATA3Q8NHX4 192 aa6.22□□□□□ -1.41
LSAMP-201ENST00000333617 RPL36ALQ969Q0 106 aaKnown RBP6.22□□□□□ -1.41
LSAMP-201ENST00000333617 STAB1Q9NY15 2570 aa6.22□□□□□ -1.41
LSAMP-201ENST00000333617 PKD1L1Q8TDX9 2849 aa6.21□□□□□ -1.42
LSAMP-201ENST00000333617 CRYBA4P53673 196 aa6.21□□□□□ -1.42
LSAMP-201ENST00000333617 CDIP1Q9H305 208 aa6.21□□□□□ -1.42
LSAMP-201ENST00000333617 SPANXA1Q9NS26 97 aa6.21□□□□□ -1.42
LSAMP-201ENST00000333617 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.2□□□□□ -1.42
LSAMP-201ENST00000333617 IGKV2-29A2NJV5 120 aaPredicted RBP6.2□□□□□ -1.42
LSAMP-201ENST00000333617 GCSHP23434 173 aa6.2□□□□□ -1.42
LSAMP-201ENST00000333617 TAL2Q16559 108 aa6.2□□□□□ -1.42
LSAMP-201ENST00000333617 DAZ4Q86SG3 579 aaKnown RBP6.2□□□□□ -1.42
LSAMP-201ENST00000333617 SLC25A29Q8N8R3 303 aa6.2□□□□□ -1.42
LSAMP-201ENST00000333617 AMELXQ99217 191 aa6.2□□□□□ -1.42
LSAMP-201ENST00000333617 KRTAP3-1Q9BYR8 98 aa6.2□□□□□ -1.42
LSAMP-201ENST00000333617 DAZ3Q9NR90 486 aaKnown RBP6.2□□□□□ -1.42
LSAMP-201ENST00000333617 UBE2D4Q9Y2X8 147 aa6.2□□□□□ -1.42
LSAMP-201ENST00000333617 ZNF815PA8K554 130 aa6.19□□□□□ -1.42
LSAMP-201ENST00000333617 CEMP1Q6PRD7 247 aaPredicted RBP6.19□□□□□ -1.42
LSAMP-201ENST00000333617 FAM104AQ969W3 186 aa6.19□□□□□ -1.42
LSAMP-201ENST00000333617 DNAH3Q8TD57 4116 aa6.19□□□□□ -1.42
LSAMP-201ENST00000333617 TRGV4A0A0C4DH28 118 aa6.18□□□□□ -1.42
LSAMP-201ENST00000333617 A0A0J9YXV3 536 aa6.18□□□□□ -1.42
LSAMP-201ENST00000333617 TRBV6-4A0A1B0GX49 114 aa6.18□□□□□ -1.42
LSAMP-201ENST00000333617 TMEM223A0PJW6 202 aa6.18□□□□□ -1.42
LSAMP-201ENST00000333617 GAGE12JA6NER3 117 aa6.18□□□□□ -1.42
LSAMP-201ENST00000333617 H3BRM9 83 aa6.18□□□□□ -1.42
LSAMP-201ENST00000333617 UBE2D3P61077 147 aa6.18□□□□□ -1.42
LSAMP-201ENST00000333617 UBE2D2P62837 147 aa6.18□□□□□ -1.42
LSAMP-201ENST00000333617 GAGE4Q13068 117 aa6.18□□□□□ -1.42
LSAMP-201ENST00000333617 GAGE5Q13069 117 aa6.18□□□□□ -1.42
LSAMP-201ENST00000333617 VAMP3Q15836 100 aa6.18□□□□□ -1.42
LSAMP-201ENST00000333617 GAGE13Q4V321 117 aa6.18□□□□□ -1.42
LSAMP-201ENST00000333617 CEND1Q8N111 149 aa6.18□□□□□ -1.42
LSAMP-201ENST00000333617 TM2D2Q9BX73 214 aa6.18□□□□□ -1.42
LSAMP-201ENST00000333617 SMIM9A6NGZ8 99 aa6.18□□□□□ -1.42
LSAMP-201ENST00000333617 ZNF22P17026 224 aaPredicted RBP6.18□□□□□ -1.42
LSAMP-201ENST00000333617 PTTG1IPP53801 180 aa6.18□□□□□ -1.42
LSAMP-201ENST00000333617 FXYD2P54710 66 aa6.18□□□□□ -1.42
LSAMP-201ENST00000333617 MRPS36P82909 103 aaKnown RBP6.18□□□□□ -1.42
LSAMP-201ENST00000333617 RNASE13Q5GAN3 156 aaKnown RBP6.18□□□□□ -1.42
LSAMP-201ENST00000333617 DGAT2L7PQ6IED9 249 aa6.18□□□□□ -1.42
LSAMP-201ENST00000333617 Q6ZUT4 128 aa6.18□□□□□ -1.42
LSAMP-201ENST00000333617 WFDC9Q8NEX5 89 aa6.18□□□□□ -1.42
LSAMP-201ENST00000333617 HIST1H4GQ99525 98 aa6.18□□□□□ -1.42
LSAMP-201ENST00000333617 TIMM21Q9BVV7 248 aa6.18□□□□□ -1.42
LSAMP-201ENST00000333617 ANK2Q01484 3957 aa6.17□□□□□ -1.42
LSAMP-201ENST00000333617 J3QQQ9 107 aa6.17□□□□□ -1.42
LSAMP-201ENST00000333617 LEPROTO15243 131 aa6.17□□□□□ -1.42
LSAMP-201ENST00000333617 SMIM13P0DJ93 91 aa6.17□□□□□ -1.42
LSAMP-201ENST00000333617 APOC4P55056 127 aa6.17□□□□□ -1.42
LSAMP-201ENST00000333617 UBE2V1Q13404 147 aa6.17□□□□□ -1.42
LSAMP-201ENST00000333617 SCGB1D4Q6XE38 83 aa6.17□□□□□ -1.42
LSAMP-201ENST00000333617 KIR2DL5BQ8NHK3 375 aa6.17□□□□□ -1.42
LSAMP-201ENST00000333617 TINCRA0A1B0GVN0 87 aa6.16□□□□□ -1.42
LSAMP-201ENST00000333617 LGALS3P17931 250 aaKnown RBP6.16□□□□□ -1.42
LSAMP-201ENST00000333617 TSPEAR-AS2P59090 65 aa6.16□□□□□ -1.42
LSAMP-201ENST00000333617 SMAGPQ0VAQ4 97 aa6.16□□□□□ -1.42
LSAMP-201ENST00000333617 FHL2Q14192 279 aa6.16□□□□□ -1.42
LSAMP-201ENST00000333617 PLEKHB2Q96CS7 222 aa6.16□□□□□ -1.42
LSAMP-201ENST00000333617 GTSF1LQ9H1H1 148 aa6.16□□□□□ -1.42
LSAMP-201ENST00000333617 K7EP13 123 aa6.15□□□□□ -1.42
LSAMP-201ENST00000333617 DEFB130BP0DP73 79 aa6.15□□□□□ -1.42
LSAMP-201ENST00000333617 DEFB130AP0DP74 79 aa6.15□□□□□ -1.42
LSAMP-201ENST00000333617 NTM-AS1Q6ZSK4 140 aa6.15□□□□□ -1.42
LSAMP-201ENST00000333617 SBSPONQ8IVN8 264 aa6.15□□□□□ -1.42
LSAMP-201ENST00000333617 LINC00612Q8N6U2 182 aa6.15□□□□□ -1.42
LSAMP-201ENST00000333617 RAB37Q96AX2 223 aa6.15□□□□□ -1.42
LSAMP-201ENST00000333617 NHP2Q9NX24 153 aaKnown RBP6.15□□□□□ -1.42
LSAMP-201ENST00000333617 FBN1P35555 2871 aaKnown RBP6.15□□□□□ -1.42
LSAMP-201ENST00000333617 IGHV3-64A0A075B6Q5 118 aa6.14□□□□□ -1.43
LSAMP-201ENST00000333617 A0A0J9YY99 117 aa6.14□□□□□ -1.43
LSAMP-201ENST00000333617 LOC100131303A0A0U1RQF7 123 aa6.14□□□□□ -1.43
LSAMP-201ENST00000333617 UBE2L6O14933 153 aa6.14□□□□□ -1.43
LSAMP-201ENST00000333617 LINC00694P0DN24 101 aa6.14□□□□□ -1.43
LSAMP-201ENST00000333617 UBE2D1P51668 147 aa6.14□□□□□ -1.43
LSAMP-201ENST00000333617 DEFB135Q30KP9 77 aa6.14□□□□□ -1.43
LSAMP-201ENST00000333617 AMMECR1LQ6DCA0 310 aa6.14□□□□□ -1.43
LSAMP-201ENST00000333617 TMEM243Q9BU79 118 aa6.14□□□□□ -1.43
LSAMP-201ENST00000333617 CSDC2Q9Y534 153 aaKnown RBP6.14□□□□□ -1.43
LSAMP-201ENST00000333617 CCL25O15444 150 aa6.14□□□□□ -1.43
LSAMP-201ENST00000333617 SRSF9Q13242 221 aaKnown RBP eCLIP6.14□□□□□ -1.43
LSAMP-201ENST00000333617 OR5A1Q8NGJ0 315 aa6.14□□□□□ -1.43
LSAMP-201ENST00000333617 GEMIN7Q9H840 131 aaKnown RBP6.14□□□□□ -1.43
LSAMP-201ENST00000333617 COL6A5A8TX70 2615 aa6.13□□□□□ -1.43
LSAMP-201ENST00000333617 LYRM9A8MSI8 78 aa6.13□□□□□ -1.43
LSAMP-201ENST00000333617 H3BUT2 72 aa6.13□□□□□ -1.43
LSAMP-201ENST00000333617 H7C423 109 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms