RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 C11orf72Q8NBR9 251 aa8.91□□□□□ -0.98
VPS33B-201ENST00000333371 VSIG2Q96IQ7 327 aa8.91□□□□□ -0.98
VPS33B-201ENST00000333371 XCL2Q9UBD3 114 aa8.91□□□□□ -0.98
VPS33B-201ENST00000333371 NDUFA7O95182 113 aa8.9□□□□□ -0.98
VPS33B-201ENST00000333371 PLA2G2AP14555 144 aa8.9□□□□□ -0.98
VPS33B-201ENST00000333371 ZNF415Q09FC8 603 aa8.9□□□□□ -0.98
VPS33B-201ENST00000333371 CDKN2A-AS1Q9UH64 79 aa8.9□□□□□ -0.98
VPS33B-201ENST00000333371 A0A0U1RRA0 63 aa8.9□□□□□ -0.98
VPS33B-201ENST00000333371 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.9□□□□□ -0.99
VPS33B-201ENST00000333371 TEX49A0A1B0GTD5 131 aa8.9□□□□□ -0.99
VPS33B-201ENST00000333371 LINC01620Q4KN68 170 aa8.9□□□□□ -0.99
VPS33B-201ENST00000333371 ACANP16112 2415 aa8.89□□□□□ -0.99
VPS33B-201ENST00000333371 COX6A2Q02221 97 aa8.89□□□□□ -0.99
VPS33B-201ENST00000333371 TMEM86BQ8N661 226 aa8.89□□□□□ -0.99
VPS33B-201ENST00000333371 CLEC2BQ92478 149 aa8.89□□□□□ -0.99
VPS33B-201ENST00000333371 ZNF625Q96I27 306 aaPredicted RBP8.89□□□□□ -0.99
VPS33B-201ENST00000333371 MTORP42345 2549 aa8.89□□□□□ -0.99
VPS33B-201ENST00000333371 TINCRA0A1B0GVN0 87 aa8.89□□□□□ -0.99
VPS33B-201ENST00000333371 DYNLRB2Q8TF09 96 aa8.89□□□□□ -0.99
VPS33B-201ENST00000333371 EDA2RQ9HAV5 297 aa8.89□□□□□ -0.99
VPS33B-201ENST00000333371 IGHV3-53P01767 116 aa8.88□□□□□ -0.99
VPS33B-201ENST00000333371 C4orf3Q8WVX3 66 aa8.88□□□□□ -0.99
VPS33B-201ENST00000333371 GEMIN7Q9H840 131 aaKnown RBP8.88□□□□□ -0.99
VPS33B-201ENST00000333371 PEMTQ9UBM1 199 aa8.88□□□□□ -0.99
VPS33B-201ENST00000333371 DNAJC9-AS1A6NH13 148 aa8.88□□□□□ -0.99
VPS33B-201ENST00000333371 ATXN8Q156A1 80 aa8.88□□□□□ -0.99
VPS33B-201ENST00000333371 A8MTW9 85 aa8.87□□□□□ -0.99
VPS33B-201ENST00000333371 LINC00694P0DN24 101 aa8.87□□□□□ -0.99
VPS33B-201ENST00000333371 ICOSQ9Y6W8 199 aa8.87□□□□□ -0.99
VPS33B-201ENST00000333371 A0A1W2PRX2 142 aa8.87□□□□□ -0.99
VPS33B-201ENST00000333371 MIAQ16674 131 aa8.87□□□□□ -0.99
VPS33B-201ENST00000333371 SPANXA1Q9NS26 97 aa8.87□□□□□ -0.99
VPS33B-201ENST00000333371 TRAV26-1A0A087WT03 109 aa8.86□□□□□ -0.99
VPS33B-201ENST00000333371 YAE1D1Q9NRH1 226 aa8.86□□□□□ -0.99
VPS33B-201ENST00000333371 TRBV30A0A0K0K1B3 111 aa8.86□□□□□ -0.99
VPS33B-201ENST00000333371 DEFB114Q30KQ6 69 aa8.86□□□□□ -0.99
VPS33B-201ENST00000333371 TMEM101Q96IK0 257 aa8.86□□□□□ -0.99
VPS33B-201ENST00000333371 CRLF1O75462 422 aa8.85□□□□□ -0.99
VPS33B-201ENST00000333371 SPANXDQ9BXN6 97 aa8.85□□□□□ -0.99
VPS33B-201ENST00000333371 SPANXCQ9NY87 97 aa8.85□□□□□ -0.99
VPS33B-201ENST00000333371 FN1P02751 2386 aaKnown RBP8.85□□□□□ -0.99
VPS33B-201ENST00000333371 HELZ2Q9BYK8 2649 aaKnown RBP8.85□□□□□ -0.99
VPS33B-201ENST00000333371 ODF3L2Q3SX64 289 aa8.85□□□□□ -0.99
VPS33B-201ENST00000333371 ZFAND6Q6FIF0 208 aa8.85□□□□□ -0.99
VPS33B-201ENST00000333371 DGAT2L7PQ6IED9 249 aa8.85□□□□□ -0.99
VPS33B-201ENST00000333371 TRGV1A0A0A0MS02 117 aa8.84□□□□□ -0.99
VPS33B-201ENST00000333371 INSP01308 110 aa8.84□□□□□ -0.99
VPS33B-201ENST00000333371 H7C423 109 aa8.84□□□□□ -0.99
VPS33B-201ENST00000333371 RPL13AP40429 203 aaKnown RBP8.84□□□□□ -0.99
VPS33B-201ENST00000333371 RS1O15537 224 aa8.84□□□□□ -1
VPS33B-201ENST00000333371 C1orf158Q8N1D5 194 aa8.84□□□□□ -1
VPS33B-201ENST00000333371 TRAV13-1A0A0B4J241 112 aa8.83□□□□□ -1
VPS33B-201ENST00000333371 TRBV10-2A0A0K0K1G8 114 aa8.83□□□□□ -1
VPS33B-201ENST00000333371 BEAN1Q3B7T3 259 aa8.83□□□□□ -1
VPS33B-201ENST00000333371 C2orf82Q6UX34 121 aa8.83□□□□□ -1
VPS33B-201ENST00000333371 Q6ZTI0 123 aa8.83□□□□□ -1
VPS33B-201ENST00000333371 RNF183Q96D59 192 aa8.83□□□□□ -1
VPS33B-201ENST00000333371 Q9H8V8 135 aa8.83□□□□□ -1
VPS33B-201ENST00000333371 TRAV4A0A0B4J268 109 aa8.83□□□□□ -1
VPS33B-201ENST00000333371 ESM1Q9NQ30 184 aa8.83□□□□□ -1
VPS33B-201ENST00000333371 KMT2BQ9UMN6 2715 aaPredicted RBP8.82□□□□□ -1
VPS33B-201ENST00000333371 LINC00242Q5T6M2 205 aa8.82□□□□□ -1
VPS33B-201ENST00000333371 ITPR2Q14571 2701 aa8.82□□□□□ -1
VPS33B-201ENST00000333371 NTM-AS1Q6ZSK4 140 aa8.82□□□□□ -1
VPS33B-201ENST00000333371 CITED2Q99967 270 aaPredicted RBP8.82□□□□□ -1
VPS33B-201ENST00000333371 STHQ8IWL8 128 aa8.81□□□□□ -1
VPS33B-201ENST00000333371 UBE2WQ96B02 151 aa8.81□□□□□ -1
VPS33B-201ENST00000333371 TMEM262E9PQX1 116 aa8.8□□□□□ -1
VPS33B-201ENST00000333371 NDUFA1O15239 70 aa8.8□□□□□ -1
VPS33B-201ENST00000333371 SOSTDC1Q6X4U4 206 aa8.8□□□□□ -1
VPS33B-201ENST00000333371 DNAJC30Q96LL9 226 aa8.8□□□□□ -1
VPS33B-201ENST00000333371 CITED1Q99966 193 aa8.8□□□□□ -1
VPS33B-201ENST00000333371 WFDC10AQ9H1F0 79 aa8.8□□□□□ -1
VPS33B-201ENST00000333371 GCN1Q92616 2671 aaKnown RBP8.8□□□□□ -1
VPS33B-201ENST00000333371 NBEAL2Q6ZNJ1 2754 aa8.8□□□□□ -1
VPS33B-201ENST00000333371 GAGE12JA6NER3 117 aa8.8□□□□□ -1
VPS33B-201ENST00000333371 M0QXV9 152 aa8.8□□□□□ -1
VPS33B-201ENST00000333371 KRTAP1-1Q07627 177 aa8.8□□□□□ -1
VPS33B-201ENST00000333371 GAGE4Q13068 117 aa8.8□□□□□ -1
VPS33B-201ENST00000333371 GAGE5Q13069 117 aa8.8□□□□□ -1
VPS33B-201ENST00000333371 PIK3CD-AS1Q5SR53 167 aa8.8□□□□□ -1
VPS33B-201ENST00000333371 PDZD2O15018 2839 aa8.8□□□□□ -1
VPS33B-201ENST00000333371 IGLV5-45A0A087WSX0 123 aa8.79□□□□□ -1
VPS33B-201ENST00000333371 TRAV8-4A0A0B4J246 113 aa8.79□□□□□ -1
VPS33B-201ENST00000333371 COX6CP09669 75 aa8.79□□□□□ -1
VPS33B-201ENST00000333371 TIRAPP58753 221 aa8.79□□□□□ -1
VPS33B-201ENST00000333371 LINC00308Q8TCZ7 52 aa8.79□□□□□ -1
VPS33B-201ENST00000333371 SMIM1B2RUZ4 78 aa8.78□□□□□ -1
VPS33B-201ENST00000333371 LOC100131303A0A0U1RQF7 123 aa8.78□□□□□ -1
VPS33B-201ENST00000333371 LST1O00453 97 aa8.78□□□□□ -1
VPS33B-201ENST00000333371 ANAPC13Q9BS18 74 aa8.78□□□□□ -1
VPS33B-201ENST00000333371 CCL24O00175 119 aa8.78□□□□□ -1
VPS33B-201ENST00000333371 NOP10Q9NPE3 64 aaKnown RBP8.78□□□□□ -1
VPS33B-201ENST00000333371 UNC79Q9P2D8 2635 aa8.77□□□□□ -1
VPS33B-201ENST00000333371 IGLV5-39A0A0G2JS06 123 aa8.77□□□□□ -1.01
VPS33B-201ENST00000333371 SNCGO76070 127 aa8.77□□□□□ -1.01
VPS33B-201ENST00000333371 TTC32Q5I0X7 151 aa8.77□□□□□ -1.01
VPS33B-201ENST00000333371 K7EQD1 137 aa8.77□□□□□ -1.01
VPS33B-201ENST00000333371 C15orf53Q8NAA6 179 aa8.77□□□□□ -1.01
VPS33B-201ENST00000333371 IGKV3OR2-268A0A0C4DH90 116 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms