RNA–Protein interactions for RNA: ENST00000332682.8

TRIM49B-201, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 1,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-201ENST00000332682 IGLV4-60A0A075B6I1 120 aa8.27□□□□□ -1.09
TRIM49B-201ENST00000332682 TRAV12-1A0A0B4J245 112 aa8.27□□□□□ -1.09
TRIM49B-201ENST00000332682 RBX1P62877 108 aa8.27□□□□□ -1.09
TRIM49B-201ENST00000332682 ODF1Q14990 250 aa8.27□□□□□ -1.09
TRIM49B-201ENST00000332682 RNASE13Q5GAN3 156 aaKnown RBP8.27□□□□□ -1.09
TRIM49B-201ENST00000332682 PAPPA-AS1Q5QFB9 102 aa8.27□□□□□ -1.09
TRIM49B-201ENST00000332682 AMELXQ99217 191 aa8.27□□□□□ -1.09
TRIM49B-201ENST00000332682 PMCHL2Q9BQD1 86 aa8.27□□□□□ -1.09
TRIM49B-201ENST00000332682 CDC42SE2Q9NRR3 84 aa8.27□□□□□ -1.09
TRIM49B-201ENST00000332682 APLNQ9ULZ1 77 aa8.27□□□□□ -1.09
TRIM49B-201ENST00000332682 CSMD3Q7Z407 3707 aa8.26□□□□□ -1.09
TRIM49B-201ENST00000332682 TRAV8-6A0A0B4J262 113 aa8.26□□□□□ -1.09
TRIM49B-201ENST00000332682 A0A1B0GUV1 79 aa8.26□□□□□ -1.09
TRIM49B-201ENST00000332682 PRSS29PA6NIE9 313 aa8.26□□□□□ -1.09
TRIM49B-201ENST00000332682 TMEM262E9PQX1 116 aa8.26□□□□□ -1.09
TRIM49B-201ENST00000332682 SCGB1D1O95968 90 aa8.26□□□□□ -1.09
TRIM49B-201ENST00000332682 PMVKQ15126 192 aa8.26□□□□□ -1.09
TRIM49B-201ENST00000332682 LGALS9CQ6DKI2 356 aa8.26□□□□□ -1.09
TRIM49B-201ENST00000332682 TEX43Q6ZNM6 134 aa8.26□□□□□ -1.09
TRIM49B-201ENST00000332682 WFDC10BQ8IUB3 73 aa8.26□□□□□ -1.09
TRIM49B-201ENST00000332682 Q8N3U1 123 aa8.26□□□□□ -1.09
TRIM49B-201ENST00000332682 TMEM101Q96IK0 257 aa8.26□□□□□ -1.09
TRIM49B-201ENST00000332682 VCX2Q9H322 139 aa8.26□□□□□ -1.09
TRIM49B-201ENST00000332682 CST9LQ9H4G1 147 aa8.26□□□□□ -1.09
TRIM49B-201ENST00000332682 KLK5Q9Y337 293 aaPredicted RBP8.26□□□□□ -1.09
TRIM49B-201ENST00000332682 A0A087WX48 190 aa8.25□□□□□ -1.09
TRIM49B-201ENST00000332682 C20orf202A1L168 122 aa8.25□□□□□ -1.09
TRIM49B-201ENST00000332682 SMIM6P0DI80 62 aa8.25□□□□□ -1.09
TRIM49B-201ENST00000332682 PKIAP61925 76 aa8.25□□□□□ -1.09
TRIM49B-201ENST00000332682 ZNF664Q8N3J9 261 aa8.25□□□□□ -1.09
TRIM49B-201ENST00000332682 LINC00588Q9Y4M8 146 aa8.25□□□□□ -1.09
TRIM49B-201ENST00000332682 CCL18P55774 89 aa8.24□□□□□ -1.09
TRIM49B-201ENST00000332682 MUC7Q8TAX7 377 aa8.24□□□□□ -1.09
TRIM49B-201ENST00000332682 MRPL35Q9NZE8 188 aaKnown RBP8.24□□□□□ -1.09
TRIM49B-201ENST00000332682 MRPS16Q9Y3D3 137 aaKnown RBP8.24□□□□□ -1.09
TRIM49B-201ENST00000332682 STARD9Q9P2P6 4700 aa8.24□□□□□ -1.09
TRIM49B-201ENST00000332682 F8VRH5 84 aa8.24□□□□□ -1.09
TRIM49B-201ENST00000332682 ZFAND6Q6FIF0 208 aa8.24□□□□□ -1.09
TRIM49B-201ENST00000332682 CDPF1Q6NVV7 123 aa8.24□□□□□ -1.09
TRIM49B-201ENST00000332682 WWC2-AS2Q96NR7 200 aa8.24□□□□□ -1.09
TRIM49B-201ENST00000332682 CHTOPQ9Y3Y2 248 aaKnown RBP8.24□□□□□ -1.09
TRIM49B-201ENST00000332682 IGLV4-69A0A075B6H9 119 aa8.23□□□□□ -1.09
TRIM49B-201ENST00000332682 TCTAP57738 103 aa8.23□□□□□ -1.09
TRIM49B-201ENST00000332682 C2orf88Q9BSF0 95 aa8.23□□□□□ -1.09
TRIM49B-201ENST00000332682 ATOH7Q8N100 152 aa8.22□□□□□ -1.09
TRIM49B-201ENST00000332682 UPK3BQ9BT76 320 aa8.22□□□□□ -1.09
TRIM49B-201ENST00000332682 DPM2O94777 84 aa8.21□□□□□ -1.1
TRIM49B-201ENST00000332682 IGHV3-30P01768 117 aa8.21□□□□□ -1.1
TRIM49B-201ENST00000332682 IGHV3-33P01772 117 aa8.21□□□□□ -1.1
TRIM49B-201ENST00000332682 ANGP03950 147 aaKnown RBP8.21□□□□□ -1.1
TRIM49B-201ENST00000332682 IGHV3-30-3P0DP02 117 aa8.21□□□□□ -1.1
TRIM49B-201ENST00000332682 IGHV3-30-5P0DP03 117 aa8.21□□□□□ -1.1
TRIM49B-201ENST00000332682 PLNP26678 52 aa8.21□□□□□ -1.1
TRIM49B-201ENST00000332682 UBE2D1P51668 147 aa8.21□□□□□ -1.1
TRIM49B-201ENST00000332682 LINC01556Q5JQF7 62 aa8.21□□□□□ -1.1
TRIM49B-201ENST00000332682 TENM2Q9NT68 2774 aa8.21□□□□□ -1.1
TRIM49B-201ENST00000332682 TRAV13-1A0A0B4J241 112 aa8.2□□□□□ -1.1
TRIM49B-201ENST00000332682 A0A0J9YXV3 536 aa8.2□□□□□ -1.1
TRIM49B-201ENST00000332682 IGKCP01834 107 aa8.2□□□□□ -1.1
TRIM49B-201ENST00000332682 DNAH10OSP0CZ25 163 aa8.2□□□□□ -1.1
TRIM49B-201ENST00000332682 IGLC3P0DOY3 106 aa8.2□□□□□ -1.1
TRIM49B-201ENST00000332682 PLECQ15149 4684 aaKnown RBP8.2□□□□□ -1.1
TRIM49B-201ENST00000332682 LINC00269Q8N2A0 174 aa8.2□□□□□ -1.1
TRIM49B-201ENST00000332682 IGKV3OR2-268A0A0C4DH90 116 aa8.19□□□□□ -1.1
TRIM49B-201ENST00000332682 C11orf86A6NJI1 115 aa8.19□□□□□ -1.1
TRIM49B-201ENST00000332682 CLPSL2Q6UWE3 100 aa8.19□□□□□ -1.1
TRIM49B-201ENST00000332682 NFE4Q86UQ8 179 aa8.19□□□□□ -1.1
TRIM49B-201ENST00000332682 CHAC1Q9BUX1 264 aa8.19□□□□□ -1.1
TRIM49B-201ENST00000332682 SIVA1O15304 175 aa8.19□□□□□ -1.1
TRIM49B-201ENST00000332682 REG3AQ06141 175 aa8.19□□□□□ -1.1
TRIM49B-201ENST00000332682 LINC00242Q5T6M2 205 aa8.19□□□□□ -1.1
TRIM49B-201ENST00000332682 FAM19A3Q7Z5A8 133 aa8.19□□□□□ -1.1
TRIM49B-201ENST00000332682 LINC00518Q8N0U6 118 aa8.19□□□□□ -1.1
TRIM49B-201ENST00000332682 C12orf57Q99622 126 aa8.19□□□□□ -1.1
TRIM49B-201ENST00000332682 PRR34Q9NV39 138 aa8.19□□□□□ -1.1
TRIM49B-201ENST00000332682 KLK12Q9UKR0 248 aa8.19□□□□□ -1.1
TRIM49B-201ENST00000332682 LINC00959A0A1B0GUT2 108 aa8.18□□□□□ -1.1
TRIM49B-201ENST00000332682 TINCRA0A1B0GVN0 87 aa8.18□□□□□ -1.1
TRIM49B-201ENST00000332682 MAJINQ3KP22 176 aa8.18□□□□□ -1.1
TRIM49B-201ENST00000332682 UBE2DNLQ8IWF7 75 aa8.18□□□□□ -1.1
TRIM49B-201ENST00000332682 TRAV9-2A0A087WT02 112 aa8.17□□□□□ -1.1
TRIM49B-201ENST00000332682 hDV102S1A0JD36 115 aa8.17□□□□□ -1.1
TRIM49B-201ENST00000332682 ZNF22P17026 224 aaPredicted RBP8.17□□□□□ -1.1
TRIM49B-201ENST00000332682 IGLV5-45A0A087WSX0 123 aa8.16□□□□□ -1.1
TRIM49B-201ENST00000332682 SEC11AP67812 179 aa8.16□□□□□ -1.1
TRIM49B-201ENST00000332682 ENHOQ6UWT2 76 aa8.16□□□□□ -1.1
TRIM49B-201ENST00000332682 STPG4Q8N801 248 aa8.16□□□□□ -1.1
TRIM49B-201ENST00000332682 VAMP8Q9BV40 100 aa8.16□□□□□ -1.1
TRIM49B-201ENST00000332682 Q9H8V8 135 aa8.16□□□□□ -1.1
TRIM49B-201ENST00000332682 HERVK_113P63121 156 aa8.15□□□□□ -1.1
TRIM49B-201ENST00000332682 COX6A2Q02221 97 aa8.15□□□□□ -1.1
TRIM49B-201ENST00000332682 CASC10Q5T4H9 136 aa8.15□□□□□ -1.1
TRIM49B-201ENST00000332682 TMEM170BQ5T4T1 132 aa8.15□□□□□ -1.1
TRIM49B-201ENST00000332682 GEMIN7Q9H840 131 aaKnown RBP8.15□□□□□ -1.1
TRIM49B-201ENST00000332682 PAM16Q9Y3D7 125 aa8.15□□□□□ -1.1
TRIM49B-201ENST00000332682 CRPP02741 224 aa8.14□□□□□ -1.11
TRIM49B-201ENST00000332682 S100A12P80511 92 aa8.14□□□□□ -1.11
TRIM49B-201ENST00000332682 SS18Q15532 418 aa8.14□□□□□ -1.11
TRIM49B-201ENST00000332682 LINC00469Q8N7U9 141 aa8.14□□□□□ -1.11
TRIM49B-201ENST00000332682 UBE2WQ96B02 151 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms