RNA–Protein interactions for RNA: ENST00000332556.4

LAMP1-201, Transcript of lysosomal associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAMP1, Length 2,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1-201ENST00000332556 FN1P02751 2386 aaKnown RBP13.81□□□□□ -0.2
LAMP1-201ENST00000332556 A0A0B4J2C4 111 aa13.81□□□□□ -0.2
LAMP1-201ENST00000332556 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.81□□□□□ -0.2
LAMP1-201ENST00000332556 IGKV2-29A2NJV5 120 aaPredicted RBP13.81□□□□□ -0.2
LAMP1-201ENST00000332556 TRIAP1O43715 76 aa13.81□□□□□ -0.2
LAMP1-201ENST00000332556 IGHV3-53P01767 116 aa13.81□□□□□ -0.2
LAMP1-201ENST00000332556 TEX29Q8N6K0 151 aa13.81□□□□□ -0.2
LAMP1-201ENST00000332556 PEMTQ9UBM1 199 aa13.81□□□□□ -0.2
LAMP1-201ENST00000332556 UNC79Q9P2D8 2635 aa13.81□□□□□ -0.2
LAMP1-201ENST00000332556 M0R2P5 195 aa13.8□□□□□ -0.2
LAMP1-201ENST00000332556 LINC01620Q4KN68 170 aa13.8□□□□□ -0.2
LAMP1-201ENST00000332556 ADAMTSL4-AS1Q5T5F5 129 aa13.8□□□□□ -0.2
LAMP1-201ENST00000332556 CITED2Q99967 270 aaPredicted RBP13.8□□□□□ -0.2
LAMP1-201ENST00000332556 ODF3L2Q3SX64 289 aa13.8□□□□□ -0.2
LAMP1-201ENST00000332556 Q8N2B8 174 aa13.8□□□□□ -0.2
LAMP1-201ENST00000332556 TRAV4A0A0B4J268 109 aa13.79□□□□□ -0.2
LAMP1-201ENST00000332556 TIMM21Q9BVV7 248 aa13.79□□□□□ -0.2
LAMP1-201ENST00000332556 TMEM262E9PQX1 116 aa13.79□□□□□ -0.2
LAMP1-201ENST00000332556 FAM104AQ969W3 186 aa13.79□□□□□ -0.2
LAMP1-201ENST00000332556 VWFP04275 2813 aa13.78□□□□□ -0.2
LAMP1-201ENST00000332556 ATXN8Q156A1 80 aa13.78□□□□□ -0.2
LAMP1-201ENST00000332556 SMR3AQ99954 134 aa13.78□□□□□ -0.2
LAMP1-201ENST00000332556 PLA2G2AP14555 144 aa13.77□□□□□ -0.2
LAMP1-201ENST00000332556 LITAFQ99732 161 aa13.77□□□□□ -0.2
LAMP1-201ENST00000332556 CITED1Q99966 193 aa13.77□□□□□ -0.2
LAMP1-201ENST00000332556 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.77□□□□□ -0.21
LAMP1-201ENST00000332556 TNFRSF18Q9Y5U5 241 aa13.77□□□□□ -0.21
LAMP1-201ENST00000332556 YAE1D1Q9NRH1 226 aa13.77□□□□□ -0.21
LAMP1-201ENST00000332556 SS18L2Q9UHA2 77 aa13.77□□□□□ -0.21
LAMP1-201ENST00000332556 GCN1Q92616 2671 aaKnown RBP13.76□□□□□ -0.21
LAMP1-201ENST00000332556 DAND5Q8N907 189 aa13.76□□□□□ -0.21
LAMP1-201ENST00000332556 LRRC75A-AS1Q8N1F1 130 aa13.75□□□□□ -0.21
LAMP1-201ENST00000332556 C11orf72Q8NBR9 251 aa13.75□□□□□ -0.21
LAMP1-201ENST00000332556 CLEC2BQ92478 149 aa13.75□□□□□ -0.21
LAMP1-201ENST00000332556 CCL24O00175 119 aa13.75□□□□□ -0.21
LAMP1-201ENST00000332556 SNCGO76070 127 aa13.75□□□□□ -0.21
LAMP1-201ENST00000332556 NDUFA12Q9UI09 145 aa13.75□□□□□ -0.21
LAMP1-201ENST00000332556 NHLRC4P0CG21 123 aaPredicted RBP13.74□□□□□ -0.21
LAMP1-201ENST00000332556 ZNF415Q09FC8 603 aa13.73□□□□□ -0.21
LAMP1-201ENST00000332556 GAGE2BQ13066 116 aa13.73□□□□□ -0.21
LAMP1-201ENST00000332556 GAGE2EQ4V326 116 aa13.73□□□□□ -0.21
LAMP1-201ENST00000332556 GAGE2DQ9UEU5 116 aa13.73□□□□□ -0.21
LAMP1-201ENST00000332556 B5MCH6 92 aa13.73□□□□□ -0.21
LAMP1-201ENST00000332556 STHQ8IWL8 128 aa13.73□□□□□ -0.21
LAMP1-201ENST00000332556 TRGV1A0A0A0MS02 117 aa13.72□□□□□ -0.21
LAMP1-201ENST00000332556 LINC00467Q9BRT7 94 aa13.72□□□□□ -0.21
LAMP1-201ENST00000332556 ICOSQ9Y6W8 199 aa13.72□□□□□ -0.21
LAMP1-201ENST00000332556 TRBV10-2A0A0K0K1G8 114 aa13.72□□□□□ -0.21
LAMP1-201ENST00000332556 C2orf82Q6UX34 121 aa13.72□□□□□ -0.21
LAMP1-201ENST00000332556 C1orf158Q8N1D5 194 aa13.72□□□□□ -0.21
LAMP1-201ENST00000332556 TRAV8-4A0A0B4J246 113 aa13.71□□□□□ -0.21
LAMP1-201ENST00000332556 TRBV30A0A0K0K1B3 111 aa13.71□□□□□ -0.21
LAMP1-201ENST00000332556 RPL35AP18077 110 aaKnown RBP13.71□□□□□ -0.21
LAMP1-201ENST00000332556 MRPS36P82909 103 aaKnown RBP13.71□□□□□ -0.21
LAMP1-201ENST00000332556 NDUFA7O95182 113 aa13.71□□□□□ -0.22
LAMP1-201ENST00000332556 INSP01308 110 aa13.71□□□□□ -0.22
LAMP1-201ENST00000332556 OTOGQ6ZRI0 2925 aa13.7□□□□□ -0.22
LAMP1-201ENST00000332556 IGHV1-58A0A0C4DH39 117 aa13.7□□□□□ -0.22
LAMP1-201ENST00000332556 UBE2WQ96B02 151 aa13.7□□□□□ -0.22
LAMP1-201ENST00000332556 HIVEP2P31629 2446 aa13.7□□□□□ -0.22
LAMP1-201ENST00000332556 H7C423 109 aa13.7□□□□□ -0.22
LAMP1-201ENST00000332556 KRTAP1-1Q07627 177 aa13.7□□□□□ -0.22
LAMP1-201ENST00000332556 M0QXV9 152 aa13.69□□□□□ -0.22
LAMP1-201ENST00000332556 Q6ZTI0 123 aa13.69□□□□□ -0.22
LAMP1-201ENST00000332556 LINC01006Q8NI28 216 aa13.69□□□□□ -0.22
LAMP1-201ENST00000332556 TTC32Q5I0X7 151 aa13.69□□□□□ -0.22
LAMP1-201ENST00000332556 C15orf53Q8NAA6 179 aa13.69□□□□□ -0.22
LAMP1-201ENST00000332556 CHCHD7Q9BUK0 85 aa13.69□□□□□ -0.22
LAMP1-201ENST00000332556 NDUFV3P56181 108 aaKnown RBP13.68□□□□□ -0.22
LAMP1-201ENST00000332556 A0A0U1RRA0 63 aa13.68□□□□□ -0.22
LAMP1-201ENST00000332556 VSIG2Q96IQ7 327 aa13.68□□□□□ -0.22
LAMP1-201ENST00000332556 A8MTW9 85 aa13.67□□□□□ -0.22
LAMP1-201ENST00000332556 GAGE5Q13069 117 aa13.67□□□□□ -0.22
LAMP1-201ENST00000332556 GAGE6Q13070 117 aa13.67□□□□□ -0.22
LAMP1-201ENST00000332556 MIAQ16674 131 aa13.67□□□□□ -0.22
LAMP1-201ENST00000332556 PYGO1Q9Y3Y4 419 aa13.67□□□□□ -0.22
LAMP1-201ENST00000332556 CCDC179H3BU77 68 aa13.67□□□□□ -0.22
LAMP1-201ENST00000332556 RPL13AP40429 203 aaKnown RBP13.66□□□□□ -0.22
LAMP1-201ENST00000332556 ZNF625Q96I27 306 aaPredicted RBP13.66□□□□□ -0.22
LAMP1-201ENST00000332556 TENM1Q9UKZ4 2725 aa13.65□□□□□ -0.22
LAMP1-201ENST00000332556 LINC00694P0DN24 101 aa13.65□□□□□ -0.22
LAMP1-201ENST00000332556 NOP10Q9NPE3 64 aaKnown RBP13.65□□□□□ -0.22
LAMP1-201ENST00000332556 UBE2D4Q9Y2X8 147 aa13.65□□□□□ -0.22
LAMP1-201ENST00000332556 SPANXDQ9BXN6 97 aa13.64□□□□□ -0.23
LAMP1-201ENST00000332556 SPANXCQ9NY87 97 aa13.64□□□□□ -0.23
LAMP1-201ENST00000332556 CDKN2A-AS1Q9UH64 79 aa13.64□□□□□ -0.23
LAMP1-201ENST00000332556 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.64□□□□□ -0.23
LAMP1-201ENST00000332556 COX6CP09669 75 aa13.63□□□□□ -0.23
LAMP1-201ENST00000332556 IFITM1P13164 125 aa13.63□□□□□ -0.23
LAMP1-201ENST00000332556 LOC100131303A0A0U1RQF7 123 aa13.63□□□□□ -0.23
LAMP1-201ENST00000332556 TINCRA0A1B0GVN0 87 aa13.63□□□□□ -0.23
LAMP1-201ENST00000332556 GAGE12JA6NER3 117 aa13.62□□□□□ -0.23
LAMP1-201ENST00000332556 GAGE4Q13068 117 aa13.62□□□□□ -0.23
LAMP1-201ENST00000332556 GIG44P09565 113 aaPredicted RBP13.6□□□□□ -0.23
LAMP1-201ENST00000332556 COX6A2Q02221 97 aa13.6□□□□□ -0.23
LAMP1-201ENST00000332556 LST1O00453 97 aa13.6□□□□□ -0.23
LAMP1-201ENST00000332556 GAGE7O76087 117 aa13.6□□□□□ -0.23
LAMP1-201ENST00000332556 GAGE12FP0CL80 117 aa13.6□□□□□ -0.23
LAMP1-201ENST00000332556 GAGE12GP0CL81 117 aa13.6□□□□□ -0.23
LAMP1-201ENST00000332556 GAGE12IP0CL82 117 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms