RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 NOTCH4Q99466 2003 aa12.36□□□□□ -0.43
PTCH1-201ENST00000331920 C1orf147Q96MC9 270 aaPredicted RBP12.36□□□□□ -0.43
PTCH1-201ENST00000331920 RAI1Q7Z5J4 1906 aaPredicted RBP12.36□□□□□ -0.43
PTCH1-201ENST00000331920 LOC100131303A0A0U1RQF7 123 aa12.35□□□□□ -0.43
PTCH1-201ENST00000331920 FRMD6-AS1P0C7T7 363 aa12.35□□□□□ -0.43
PTCH1-201ENST00000331920 ODF3L1Q8IXM7 274 aa12.35□□□□□ -0.43
PTCH1-201ENST00000331920 SYCNQ0VAF6 134 aa12.35□□□□□ -0.43
PTCH1-201ENST00000331920 K7EMT4 169 aa12.35□□□□□ -0.43
PTCH1-201ENST00000331920 TANC1Q9C0D5 1861 aa12.35□□□□□ -0.43
PTCH1-201ENST00000331920 EBI3Q14213 229 aa12.35□□□□□ -0.43
PTCH1-201ENST00000331920 C11orf53Q8IXP5 236 aa12.34□□□□□ -0.43
PTCH1-201ENST00000331920 E7EUB6 86 aa12.34□□□□□ -0.43
PTCH1-201ENST00000331920 BEAN1Q3B7T3 259 aa12.34□□□□□ -0.43
PTCH1-201ENST00000331920 LINC00308Q8TCZ7 52 aa12.34□□□□□ -0.43
PTCH1-201ENST00000331920 SIP14410 1827 aa12.34□□□□□ -0.43
PTCH1-201ENST00000331920 FAM167A-AS1Q96KT0 104 aa12.34□□□□□ -0.43
PTCH1-201ENST00000331920 RSPO1Q2MKA7 263 aaPredicted RBP12.34□□□□□ -0.43
PTCH1-201ENST00000331920 LINC00694P0DN24 101 aa12.33□□□□□ -0.43
PTCH1-201ENST00000331920 SONP18583 2426 aaKnown RBP12.33□□□□□ -0.44
PTCH1-201ENST00000331920 CCDC179H3BU77 68 aa12.33□□□□□ -0.44
PTCH1-201ENST00000331920 IGHV6-1A0A0B4J1U7 121 aa12.33□□□□□ -0.44
PTCH1-201ENST00000331920 CRIPAKQ8N1N5 446 aa12.33□□□□□ -0.44
PTCH1-201ENST00000331920 Q8N976 141 aa12.33□□□□□ -0.44
PTCH1-201ENST00000331920 LYRM9A8MSI8 78 aa12.32□□□□□ -0.44
PTCH1-201ENST00000331920 MRPS12O15235 138 aaKnown RBP12.32□□□□□ -0.44
PTCH1-201ENST00000331920 Q6ZQY7 126 aa12.32□□□□□ -0.44
PTCH1-201ENST00000331920 FAM208BQ5VWN6 2430 aa12.32□□□□□ -0.44
PTCH1-201ENST00000331920 PROK1P58294 105 aa12.32□□□□□ -0.44
PTCH1-201ENST00000331920 PCOTHQ58A44 107 aa12.32□□□□□ -0.44
PTCH1-201ENST00000331920 ZNF524Q96C55 264 aa12.31□□□□□ -0.44
PTCH1-201ENST00000331920 IGF1P05019 195 aa12.31□□□□□ -0.44
PTCH1-201ENST00000331920 NEXN-AS1Q8NBZ9 246 aa12.31□□□□□ -0.44
PTCH1-201ENST00000331920 DHRS4-AS1Q9P1J3 65 aa12.31□□□□□ -0.44
PTCH1-201ENST00000331920 A8MZ25 164 aa12.31□□□□□ -0.44
PTCH1-201ENST00000331920 SPRY4Q9C004 299 aa12.31□□□□□ -0.44
PTCH1-201ENST00000331920 IBA57-AS1B1ANH7 110 aa12.3□□□□□ -0.44
PTCH1-201ENST00000331920 INAFM1C9JVW0 142 aa12.3□□□□□ -0.44
PTCH1-201ENST00000331920 LINC00208Q96KT6 92 aa12.3□□□□□ -0.44
PTCH1-201ENST00000331920 CSDC2Q9Y534 153 aaKnown RBP12.3□□□□□ -0.44
PTCH1-201ENST00000331920 NAV3Q8IVL0 2385 aa12.3□□□□□ -0.44
PTCH1-201ENST00000331920 TRBV6-8A0A0A6YYG3 113 aa12.3□□□□□ -0.44
PTCH1-201ENST00000331920 TP73-AS1Q9UF72 201 aa12.3□□□□□ -0.44
PTCH1-201ENST00000331920 PLA2G2EQ9NZK7 142 aa12.29□□□□□ -0.44
PTCH1-201ENST00000331920 LINC00322Q6ZN03 302 aaPredicted RBP12.29□□□□□ -0.44
PTCH1-201ENST00000331920 TMEM89A2RUT3 159 aa12.29□□□□□ -0.44
PTCH1-201ENST00000331920 SERTAD4-AS1Q5TG53 156 aa12.28□□□□□ -0.44
PTCH1-201ENST00000331920 CRYGAP11844 174 aa12.28□□□□□ -0.44
PTCH1-201ENST00000331920 ZNF80P51504 273 aaPredicted RBP12.27□□□□□ -0.44
PTCH1-201ENST00000331920 CLUHP3Q96NS8 147 aa12.27□□□□□ -0.44
PTCH1-201ENST00000331920 H7C423 109 aa12.27□□□□□ -0.45
PTCH1-201ENST00000331920 CFAP126Q5VTH2 177 aa12.27□□□□□ -0.45
PTCH1-201ENST00000331920 SMIM11BQ8TCY0 68 aa12.27□□□□□ -0.45
PTCH1-201ENST00000331920 BBC3Q96PG8 261 aaPredicted RBP12.27□□□□□ -0.45
PTCH1-201ENST00000331920 IGLV4-3A0A075B6K6 122 aa12.27□□□□□ -0.45
PTCH1-201ENST00000331920 PRLHP81277 87 aa12.26□□□□□ -0.45
PTCH1-201ENST00000331920 U3KQA8 63 aa12.26□□□□□ -0.45
PTCH1-201ENST00000331920 IGLV2-8P01709 118 aa12.25□□□□□ -0.45
PTCH1-201ENST00000331920 ADORA2A-AS1P86434 159 aa12.25□□□□□ -0.45
PTCH1-201ENST00000331920 LOC107984640A0A0U1RRK4 108 aa12.25□□□□□ -0.45
PTCH1-201ENST00000331920 M0R378 163 aa12.25□□□□□ -0.45
PTCH1-201ENST00000331920 Q8N7P7 452 aa12.25□□□□□ -0.45
PTCH1-201ENST00000331920 HIVEP2P31629 2446 aa12.25□□□□□ -0.45
PTCH1-201ENST00000331920 DAZAP2Q15038 168 aaPredicted RBP12.24□□□□□ -0.45
PTCH1-201ENST00000331920 LINC01547P58512 204 aaPredicted RBP12.24□□□□□ -0.45
PTCH1-201ENST00000331920 KPRPQ5T749 579 aaPredicted RBP12.24□□□□□ -0.45
PTCH1-201ENST00000331920 ZNF843Q8N446 348 aa12.24□□□□□ -0.45
PTCH1-201ENST00000331920 SBSPONQ8IVN8 264 aa12.23□□□□□ -0.45
PTCH1-201ENST00000331920 SMIM9A6NGZ8 99 aa12.23□□□□□ -0.45
PTCH1-201ENST00000331920 IGLV2-11P01706 119 aa12.23□□□□□ -0.45
PTCH1-201ENST00000331920 DEFB116Q30KQ4 102 aa12.23□□□□□ -0.45
PTCH1-201ENST00000331920 TRAV10A0A0B4J240 114 aa12.22□□□□□ -0.45
PTCH1-201ENST00000331920 MAPKAPK5-AS1Q8N8E1 139 aa12.22□□□□□ -0.45
PTCH1-201ENST00000331920 A0A1B0GXF2 115 aa12.22□□□□□ -0.45
PTCH1-201ENST00000331920 M0QXV9 152 aa12.22□□□□□ -0.45
PTCH1-201ENST00000331920 COX7CP15954 63 aa12.22□□□□□ -0.45
PTCH1-201ENST00000331920 LINC01548A6NM66 108 aa12.22□□□□□ -0.45
PTCH1-201ENST00000331920 IGLV4-69A0A075B6H9 119 aa12.22□□□□□ -0.45
PTCH1-201ENST00000331920 ZNF22P17026 224 aaPredicted RBP12.22□□□□□ -0.45
PTCH1-201ENST00000331920 GDF5OSQ5U4N7 250 aa12.22□□□□□ -0.45
PTCH1-201ENST00000331920 NUPR2A6NF83 97 aa12.21□□□□□ -0.45
PTCH1-201ENST00000331920 TRBV30A0A0K0K1B3 111 aa12.21□□□□□ -0.45
PTCH1-201ENST00000331920 CRIP2P52943 208 aaPredicted RBP12.2□□□□□ -0.46
PTCH1-201ENST00000331920 CCDC140Q96MF4 163 aa12.2□□□□□ -0.46
PTCH1-201ENST00000331920 LRP4O75096 1905 aa12.19□□□□□ -0.46
PTCH1-201ENST00000331920 DOPEY1Q5JWR5 2465 aa12.19□□□□□ -0.46
PTCH1-201ENST00000331920 DEFB114Q30KQ6 69 aa12.18□□□□□ -0.46
PTCH1-201ENST00000331920 SMIM26A0A096LP01 95 aa12.18□□□□□ -0.46
PTCH1-201ENST00000331920 IGLV3-1P01715 115 aa12.18□□□□□ -0.46
PTCH1-201ENST00000331920 ZNF73O43830 326 aaPredicted RBP12.18□□□□□ -0.46
PTCH1-201ENST00000331920 C19orf71A6NCJ1 209 aa12.18□□□□□ -0.46
PTCH1-201ENST00000331920 ABCA2Q9BZC7 2435 aa12.18□□□□□ -0.46
PTCH1-201ENST00000331920 PRM2P04554 102 aa12.18□□□□□ -0.46
PTCH1-201ENST00000331920 LINC00474Q9P2X8 69 aa12.18□□□□□ -0.46
PTCH1-201ENST00000331920 IGLV2-14P01704 120 aa12.17□□□□□ -0.46
PTCH1-201ENST00000331920 LST1O00453 97 aa12.16□□□□□ -0.46
PTCH1-201ENST00000331920 PLA2G5P39877 138 aa12.16□□□□□ -0.46
PTCH1-201ENST00000331920 CD164L2Q6UWJ8 174 aa12.15□□□□□ -0.46
PTCH1-201ENST00000331920 C7orf65Q6ZTY9 151 aa12.15□□□□□ -0.46
PTCH1-201ENST00000331920 PYGO1Q9Y3Y4 419 aa12.15□□□□□ -0.46
PTCH1-201ENST00000331920 IGLV5-52A0A0A0MRZ9 124 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms