RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 APOC4P55056 127 aa11.73□□□□□ -0.53
SYNM-201ENST00000328642 OXLD1Q5BKU9 147 aa11.73□□□□□ -0.53
SYNM-201ENST00000328642 C2orf91Q6ZV80 131 aa11.73□□□□□ -0.53
SYNM-201ENST00000328642 E9PLD3 99 aa11.72□□□□□ -0.53
SYNM-201ENST00000328642 UBE2WQ96B02 151 aa11.72□□□□□ -0.53
SYNM-201ENST00000328642 Q9HAA7 133 aa11.72□□□□□ -0.53
SYNM-201ENST00000328642 APCP25054 2843 aa11.72□□□□□ -0.53
SYNM-201ENST00000328642 IGHV3-30P01768 117 aa11.72□□□□□ -0.53
SYNM-201ENST00000328642 IGHV3-33P01772 117 aa11.72□□□□□ -0.53
SYNM-201ENST00000328642 IGHV3-30-3P0DP02 117 aa11.72□□□□□ -0.53
SYNM-201ENST00000328642 IGHV3-30-5P0DP03 117 aa11.72□□□□□ -0.53
SYNM-201ENST00000328642 WFDC2Q14508 124 aa11.72□□□□□ -0.53
SYNM-201ENST00000328642 IGLL5B9A064 214 aa11.72□□□□□ -0.53
SYNM-201ENST00000328642 K7EP34 96 aa11.71□□□□□ -0.53
SYNM-201ENST00000328642 HILS1P60008 231 aa11.71□□□□□ -0.53
SYNM-201ENST00000328642 VSIG2Q96IQ7 327 aa11.71□□□□□ -0.53
SYNM-201ENST00000328642 IGLV4-3A0A075B6K6 122 aa11.71□□□□□ -0.53
SYNM-201ENST00000328642 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.71□□□□□ -0.53
SYNM-201ENST00000328642 TRAV25A0A0B4J276 109 aa11.71□□□□□ -0.53
SYNM-201ENST00000328642 RBMY1BA6NDE4 496 aaKnown RBP11.71□□□□□ -0.53
SYNM-201ENST00000328642 RBMY1EA6NEQ0 496 aaKnown RBP11.71□□□□□ -0.53
SYNM-201ENST00000328642 RBMY1DP0C7P1 496 aaKnown RBP11.71□□□□□ -0.53
SYNM-201ENST00000328642 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.71□□□□□ -0.53
SYNM-201ENST00000328642 TIMM17AQ99595 171 aa11.71□□□□□ -0.53
SYNM-201ENST00000328642 RBMY1A1P0DJD3 496 aaKnown RBP11.71□□□□□ -0.54
SYNM-201ENST00000328642 RBMY1CP0DJD4 496 aa11.71□□□□□ -0.54
SYNM-201ENST00000328642 POLR2KP53803 58 aaKnown RBP11.71□□□□□ -0.54
SYNM-201ENST00000328642 RBMY1FQ15415 496 aaKnown RBP11.71□□□□□ -0.54
SYNM-201ENST00000328642 Q6ZSN1 163 aa11.71□□□□□ -0.54
SYNM-201ENST00000328642 ZNF580Q9UK33 172 aa11.7□□□□□ -0.54
SYNM-201ENST00000328642 SIVA1O15304 175 aa11.7□□□□□ -0.54
SYNM-201ENST00000328642 TRAV12-1A0A0B4J245 112 aa11.7□□□□□ -0.54
SYNM-201ENST00000328642 PTH2Q96A98 100 aa11.69□□□□□ -0.54
SYNM-201ENST00000328642 C2orf82Q6UX34 121 aa11.69□□□□□ -0.54
SYNM-201ENST00000328642 C9orf85Q96MD7 179 aa11.69□□□□□ -0.54
SYNM-201ENST00000328642 TSHBP01222 138 aa11.69□□□□□ -0.54
SYNM-201ENST00000328642 HERVK_113P63121 156 aa11.68□□□□□ -0.54
SYNM-201ENST00000328642 SPANXA1Q9NS26 97 aa11.68□□□□□ -0.54
SYNM-201ENST00000328642 S100A7L2Q5SY68 101 aa11.68□□□□□ -0.54
SYNM-201ENST00000328642 TRAV26-1A0A087WT03 109 aa11.68□□□□□ -0.54
SYNM-201ENST00000328642 TEX48A0A1B0GUV7 120 aa11.67□□□□□ -0.54
SYNM-201ENST00000328642 NIPBLQ6KC79 2804 aaeCLIP11.67□□□□□ -0.54
SYNM-201ENST00000328642 TRBV27A0A0K0K1C4 114 aa11.67□□□□□ -0.54
SYNM-201ENST00000328642 LEPROTO15243 131 aa11.67□□□□□ -0.54
SYNM-201ENST00000328642 ZNF22P17026 224 aaPredicted RBP11.66□□□□□ -0.54
SYNM-201ENST00000328642 C1orf158Q8N1D5 194 aa11.66□□□□□ -0.54
SYNM-201ENST00000328642 ODF3Q96PU9 254 aa11.66□□□□□ -0.54
SYNM-201ENST00000328642 COPS9Q8WXC6 57 aa11.66□□□□□ -0.54
SYNM-201ENST00000328642 KLK12Q9UKR0 248 aa11.66□□□□□ -0.54
SYNM-201ENST00000328642 IGHV4-4A0A075B6R2 117 aa11.66□□□□□ -0.54
SYNM-201ENST00000328642 RNF152Q8N8N0 203 aa11.66□□□□□ -0.54
SYNM-201ENST00000328642 LINC00526Q96FQ7 95 aa11.65□□□□□ -0.54
SYNM-201ENST00000328642 DAZ2Q13117 558 aaKnown RBP11.64□□□□□ -0.55
SYNM-201ENST00000328642 DAZ4Q86SG3 579 aaKnown RBP11.64□□□□□ -0.55
SYNM-201ENST00000328642 DAZ3Q9NR90 486 aaKnown RBP11.64□□□□□ -0.55
SYNM-201ENST00000328642 CFC1BP0CG36 223 aa11.64□□□□□ -0.55
SYNM-201ENST00000328642 CFC1P0CG37 223 aa11.64□□□□□ -0.55
SYNM-201ENST00000328642 ATP5G1P05496 136 aa11.64□□□□□ -0.55
SYNM-201ENST00000328642 COX8CQ7Z4L0 72 aa11.64□□□□□ -0.55
SYNM-201ENST00000328642 SPART-AS1P0CW21 52 aa11.63□□□□□ -0.55
SYNM-201ENST00000328642 IGLV2-18A0A075B6J9 118 aa11.62□□□□□ -0.55
SYNM-201ENST00000328642 NDUFA11Q86Y39 141 aa11.62□□□□□ -0.55
SYNM-201ENST00000328642 DNAJC30Q96LL9 226 aa11.62□□□□□ -0.55
SYNM-201ENST00000328642 BAHCC1Q9P281 2608 aa11.62□□□□□ -0.55
SYNM-201ENST00000328642 MXRA5Q9NR99 2828 aa11.62□□□□□ -0.55
SYNM-201ENST00000328642 NSD1Q96L73 2696 aaPredicted RBP11.62□□□□□ -0.55
SYNM-201ENST00000328642 TRAV4A0A0B4J268 109 aa11.62□□□□□ -0.55
SYNM-201ENST00000328642 NFE4Q86UQ8 179 aa11.61□□□□□ -0.55
SYNM-201ENST00000328642 TAL2Q16559 108 aa11.61□□□□□ -0.55
SYNM-201ENST00000328642 SIGMAR1Q99720 223 aa11.61□□□□□ -0.55
SYNM-201ENST00000328642 LINC00694P0DN24 101 aa11.6□□□□□ -0.55
SYNM-201ENST00000328642 LINC00269Q8N2A0 174 aa11.6□□□□□ -0.55
SYNM-201ENST00000328642 IGKV2D-24A0A075B6R9 120 aa11.6□□□□□ -0.55
SYNM-201ENST00000328642 IGHV1-58A0A0C4DH39 117 aa11.6□□□□□ -0.55
SYNM-201ENST00000328642 RBX1P62877 108 aa11.6□□□□□ -0.55
SYNM-201ENST00000328642 NTN5Q8WTR8 489 aaPredicted RBP11.6□□□□□ -0.55
SYNM-201ENST00000328642 EDA2RQ9HAV5 297 aa11.6□□□□□ -0.55
SYNM-201ENST00000328642 HIGD1BQ9P298 99 aa11.6□□□□□ -0.55
SYNM-201ENST00000328642 PRO0255Q9UI72 69 aa11.6□□□□□ -0.55
SYNM-201ENST00000328642 ATXN8Q156A1 80 aa11.6□□□□□ -0.55
SYNM-201ENST00000328642 CLEC2BQ92478 149 aa11.6□□□□□ -0.55
SYNM-201ENST00000328642 A0A0J9YXY3 114 aa11.59□□□□□ -0.55
SYNM-201ENST00000328642 IGIPA6NJ69 53 aa11.59□□□□□ -0.55
SYNM-201ENST00000328642 RS1O15537 224 aa11.59□□□□□ -0.55
SYNM-201ENST00000328642 ZNF561-AS1K7EIQ3 104 aa11.59□□□□□ -0.55
SYNM-201ENST00000328642 RETNQ9HD89 108 aa11.59□□□□□ -0.55
SYNM-201ENST00000328642 UBE2DNLQ8IWF7 75 aa11.58□□□□□ -0.56
SYNM-201ENST00000328642 SLC25A20O43772 301 aa11.58□□□□□ -0.56
SYNM-201ENST00000328642 PIK3CD-AS1Q5SR53 167 aa11.58□□□□□ -0.56
SYNM-201ENST00000328642 C10orf126Q8N4M7 172 aa11.58□□□□□ -0.56
SYNM-201ENST00000328642 MIR7-3HGQ8N6C7 128 aa11.58□□□□□ -0.56
SYNM-201ENST00000328642 TSPEAR-AS2P59090 65 aa11.57□□□□□ -0.56
SYNM-201ENST00000328642 TRBV6-5A0A0K0K1A5 114 aa11.57□□□□□ -0.56
SYNM-201ENST00000328642 IGLV1-51P01701 117 aa11.57□□□□□ -0.56
SYNM-201ENST00000328642 KIF25-AS1Q9Y6Z4 181 aa11.57□□□□□ -0.56
SYNM-201ENST00000328642 TSPAN13O95857 204 aa11.56□□□□□ -0.56
SYNM-201ENST00000328642 A0A096LNT2 108 aa11.56□□□□□ -0.56
SYNM-201ENST00000328642 TRBV10-1A0A0K0K1A3 114 aa11.56□□□□□ -0.56
SYNM-201ENST00000328642 MRPL23Q16540 153 aaKnown RBP11.56□□□□□ -0.56
SYNM-201ENST00000328642 LINC00315P59091 139 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms