RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 KRTDAPP60985 99 aa7.02□□□□□ -1.29
VIPAS39-201ENST00000327028 MRPS36P82909 103 aaKnown RBP7.02□□□□□ -1.29
VIPAS39-201ENST00000327028 MRPS16Q9Y3D3 137 aaKnown RBP7.02□□□□□ -1.29
VIPAS39-201ENST00000327028 ZFAND6Q6FIF0 208 aa7.02□□□□□ -1.29
VIPAS39-201ENST00000327028 CDPF1Q6NVV7 123 aa7.02□□□□□ -1.29
VIPAS39-201ENST00000327028 Q6ZN92 141 aa7.02□□□□□ -1.29
VIPAS39-201ENST00000327028 OR5A1Q8NGJ0 315 aa7.02□□□□□ -1.29
VIPAS39-201ENST00000327028 FAM104AQ969W3 186 aa7.02□□□□□ -1.29
VIPAS39-201ENST00000327028 TMEM101Q96IK0 257 aa7.02□□□□□ -1.29
VIPAS39-201ENST00000327028 CSMD3Q7Z407 3707 aa7.02□□□□□ -1.29
VIPAS39-201ENST00000327028 SYS1-DBNDD2H3BUS1 97 aa7.01□□□□□ -1.29
VIPAS39-201ENST00000327028 CCL18P55774 89 aa7.01□□□□□ -1.29
VIPAS39-201ENST00000327028 PAPPA-AS1Q5QFB9 102 aa7.01□□□□□ -1.29
VIPAS39-201ENST00000327028 DGAT2L7PQ6IED9 249 aa7.01□□□□□ -1.29
VIPAS39-201ENST00000327028 Q6ZUT4 128 aa7.01□□□□□ -1.29
VIPAS39-201ENST00000327028 BAALCQ8WXS3 180 aa7.01□□□□□ -1.29
VIPAS39-201ENST00000327028 OPRPNQ99935 248 aaPredicted RBP7.01□□□□□ -1.29
VIPAS39-201ENST00000327028 A0A1B0GUV1 79 aa7.01□□□□□ -1.29
VIPAS39-201ENST00000327028 TMEM262E9PQX1 116 aa7.01□□□□□ -1.29
VIPAS39-201ENST00000327028 MPV17L2Q567V2 206 aa7.01□□□□□ -1.29
VIPAS39-201ENST00000327028 LINC00588Q9Y4M8 146 aa7.01□□□□□ -1.29
VIPAS39-201ENST00000327028 RBX1P62877 108 aa7□□□□□ -1.29
VIPAS39-201ENST00000327028 PET117Q6UWS5 81 aa7□□□□□ -1.29
VIPAS39-201ENST00000327028 SPATA12Q7Z6I5 190 aa7□□□□□ -1.29
VIPAS39-201ENST00000327028 WFDC10BQ8IUB3 73 aa7□□□□□ -1.29
VIPAS39-201ENST00000327028 TRAV12-1A0A0B4J245 112 aa7□□□□□ -1.29
VIPAS39-201ENST00000327028 PRSS1P07477 247 aa7□□□□□ -1.29
VIPAS39-201ENST00000327028 ZNF664Q8N3J9 261 aa7□□□□□ -1.29
VIPAS39-201ENST00000327028 AMELXQ99217 191 aa7□□□□□ -1.29
VIPAS39-201ENST00000327028 UPK3BQ9BT76 320 aa7□□□□□ -1.29
VIPAS39-201ENST00000327028 CDC42SE2Q9NRR3 84 aa7□□□□□ -1.29
VIPAS39-201ENST00000327028 A0A087WX48 190 aa6.99□□□□□ -1.29
VIPAS39-201ENST00000327028 H0Y8G0 127 aa6.99□□□□□ -1.29
VIPAS39-201ENST00000327028 PMVKQ15126 192 aa6.99□□□□□ -1.29
VIPAS39-201ENST00000327028 VCX2Q9H322 139 aa6.99□□□□□ -1.29
VIPAS39-201ENST00000327028 IGLV4-60A0A075B6I1 120 aa6.99□□□□□ -1.29
VIPAS39-201ENST00000327028 PYY3Q5JQD4 70 aa6.99□□□□□ -1.29
VIPAS39-201ENST00000327028 TEX43Q6ZNM6 134 aa6.99□□□□□ -1.29
VIPAS39-201ENST00000327028 Q8N976 141 aa6.99□□□□□ -1.29
VIPAS39-201ENST00000327028 C2orf88Q9BSF0 95 aa6.99□□□□□ -1.29
VIPAS39-201ENST00000327028 DDTP30046 118 aa6.98□□□□□ -1.29
VIPAS39-201ENST00000327028 RNASE13Q5GAN3 156 aaKnown RBP6.98□□□□□ -1.29
VIPAS39-201ENST00000327028 Q8N3U1 123 aa6.98□□□□□ -1.29
VIPAS39-201ENST00000327028 CST9LQ9H4G1 147 aa6.98□□□□□ -1.29
VIPAS39-201ENST00000327028 C20orf202A1L168 122 aa6.98□□□□□ -1.29
VIPAS39-201ENST00000327028 PRSS29PA6NIE9 313 aa6.98□□□□□ -1.29
VIPAS39-201ENST00000327028 ODF1Q14990 250 aa6.98□□□□□ -1.29
VIPAS39-201ENST00000327028 LINC01556Q5JQF7 62 aa6.98□□□□□ -1.29
VIPAS39-201ENST00000327028 ZC2HC1BQ5TFG8 222 aa6.98□□□□□ -1.29
VIPAS39-201ENST00000327028 LINC01545Q5VT33 79 aa6.98□□□□□ -1.29
VIPAS39-201ENST00000327028 LGALS9CQ6DKI2 356 aa6.98□□□□□ -1.29
VIPAS39-201ENST00000327028 PRO1933Q9H354 126 aa6.98□□□□□ -1.29
VIPAS39-201ENST00000327028 DNAH10OSP0CZ25 163 aa6.97□□□□□ -1.29
VIPAS39-201ENST00000327028 STARD9Q9P2P6 4700 aa6.97□□□□□ -1.29
VIPAS39-201ENST00000327028 JOSD1Q15040 202 aaPredicted RBP6.97□□□□□ -1.29
VIPAS39-201ENST00000327028 UBE2DNLQ8IWF7 75 aa6.97□□□□□ -1.29
VIPAS39-201ENST00000327028 TENM2Q9NT68 2774 aa6.97□□□□□ -1.29
VIPAS39-201ENST00000327028 IGHV3-30P01768 117 aa6.97□□□□□ -1.29
VIPAS39-201ENST00000327028 IGHV3-33P01772 117 aa6.97□□□□□ -1.29
VIPAS39-201ENST00000327028 IGHV3-30-3P0DP02 117 aa6.97□□□□□ -1.29
VIPAS39-201ENST00000327028 IGHV3-30-5P0DP03 117 aa6.97□□□□□ -1.29
VIPAS39-201ENST00000327028 CHTOPQ9Y3Y2 248 aaKnown RBP6.97□□□□□ -1.29
VIPAS39-201ENST00000327028 PLECQ15149 4684 aaKnown RBP6.96□□□□□ -1.3
VIPAS39-201ENST00000327028 C3orf84H3BNL1 204 aa6.96□□□□□ -1.3
VIPAS39-201ENST00000327028 SIVA1O15304 175 aa6.96□□□□□ -1.3
VIPAS39-201ENST00000327028 SCGB1D1O95968 90 aa6.96□□□□□ -1.3
VIPAS39-201ENST00000327028 ANGP03950 147 aaKnown RBP6.96□□□□□ -1.3
VIPAS39-201ENST00000327028 LBHQ53QV2 105 aaPredicted RBP6.96□□□□□ -1.3
VIPAS39-201ENST00000327028 MRPL35Q9NZE8 188 aaKnown RBP6.96□□□□□ -1.3
VIPAS39-201ENST00000327028 F8VRH5 84 aa6.96□□□□□ -1.3
VIPAS39-201ENST00000327028 IGLV4-69A0A075B6H9 119 aa6.95□□□□□ -1.3
VIPAS39-201ENST00000327028 TSTD3H0UI37 97 aa6.95□□□□□ -1.3
VIPAS39-201ENST00000327028 UBE2D1P51668 147 aa6.95□□□□□ -1.3
VIPAS39-201ENST00000327028 CASC10Q5T4H9 136 aa6.95□□□□□ -1.3
VIPAS39-201ENST00000327028 PMCHL2Q9BQD1 86 aa6.95□□□□□ -1.3
VIPAS39-201ENST00000327028 DPM2O94777 84 aa6.95□□□□□ -1.3
VIPAS39-201ENST00000327028 IGLC3P0DOY3 106 aa6.95□□□□□ -1.3
VIPAS39-201ENST00000327028 LINC00269Q8N2A0 174 aa6.95□□□□□ -1.3
VIPAS39-201ENST00000327028 FAM19A3Q7Z5A8 133 aa6.94□□□□□ -1.3
VIPAS39-201ENST00000327028 PRR34Q9NV39 138 aa6.94□□□□□ -1.3
VIPAS39-201ENST00000327028 KLK12Q9UKR0 248 aa6.94□□□□□ -1.3
VIPAS39-201ENST00000327028 TRAV13-1A0A0B4J241 112 aa6.94□□□□□ -1.3
VIPAS39-201ENST00000327028 TMEM238LA0A1B0GVL6 79 aa6.94□□□□□ -1.3
VIPAS39-201ENST00000327028 PLNP26678 52 aa6.94□□□□□ -1.3
VIPAS39-201ENST00000327028 REG3AQ06141 175 aa6.94□□□□□ -1.3
VIPAS39-201ENST00000327028 CLPSL2Q6UWE3 100 aa6.94□□□□□ -1.3
VIPAS39-201ENST00000327028 Q9H8V8 135 aa6.94□□□□□ -1.3
VIPAS39-201ENST00000327028 A0A0J9YXV3 536 aa6.93□□□□□ -1.3
VIPAS39-201ENST00000327028 IGKCP01834 107 aa6.93□□□□□ -1.3
VIPAS39-201ENST00000327028 NFE4Q86UQ8 179 aa6.93□□□□□ -1.3
VIPAS39-201ENST00000327028 CHAC1Q9BUX1 264 aa6.93□□□□□ -1.3
VIPAS39-201ENST00000327028 VPS13DQ5THJ4 4388 aa6.93□□□□□ -1.3
VIPAS39-201ENST00000327028 IGKV3OR2-268A0A0C4DH90 116 aa6.93□□□□□ -1.3
VIPAS39-201ENST00000327028 LINC00959A0A1B0GUT2 108 aa6.93□□□□□ -1.3
VIPAS39-201ENST00000327028 TINCRA0A1B0GVN0 87 aa6.93□□□□□ -1.3
VIPAS39-201ENST00000327028 CCL25O15444 150 aa6.93□□□□□ -1.3
VIPAS39-201ENST00000327028 CRPP02741 224 aa6.93□□□□□ -1.3
VIPAS39-201ENST00000327028 C11orf86A6NJI1 115 aa6.92□□□□□ -1.3
VIPAS39-201ENST00000327028 SEC11AP67812 179 aa6.92□□□□□ -1.3
VIPAS39-201ENST00000327028 LINC00242Q5T6M2 205 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms