RNA–Protein interactions for RNA: ENST00000324771.12

DDR1-223, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-223ENST00000324771 LINC00467Q9BRT7 94 aa8.73□□□□□ -1.01
DDR1-223ENST00000324771 TRAV8-4A0A0B4J246 113 aa8.72□□□□□ -1.01
DDR1-223ENST00000324771 RBMY1BA6NDE4 496 aaKnown RBP8.72□□□□□ -1.01
DDR1-223ENST00000324771 RBMY1EA6NEQ0 496 aaKnown RBP8.72□□□□□ -1.01
DDR1-223ENST00000324771 RBMY1DP0C7P1 496 aaKnown RBP8.72□□□□□ -1.01
DDR1-223ENST00000324771 RBMY1A1P0DJD3 496 aaKnown RBP8.72□□□□□ -1.01
DDR1-223ENST00000324771 RBMY1CP0DJD4 496 aa8.72□□□□□ -1.01
DDR1-223ENST00000324771 MED14OSP0DP75 135 aa8.72□□□□□ -1.01
DDR1-223ENST00000324771 ZANQ9Y493 2812 aa8.72□□□□□ -1.01
DDR1-223ENST00000324771 LEPROTO15243 131 aa8.72□□□□□ -1.01
DDR1-223ENST00000324771 IFITM1P13164 125 aa8.72□□□□□ -1.01
DDR1-223ENST00000324771 MRPL23Q16540 153 aaKnown RBP8.72□□□□□ -1.01
DDR1-223ENST00000324771 C16orf74Q96GX8 76 aa8.72□□□□□ -1.01
DDR1-223ENST00000324771 CRYGDP07320 174 aa8.72□□□□□ -1.01
DDR1-223ENST00000324771 SHISA2Q6UWI4 295 aa8.72□□□□□ -1.01
DDR1-223ENST00000324771 PPDPFLQ8WWR9 84 aa8.72□□□□□ -1.01
DDR1-223ENST00000324771 LOC100131303A0A0U1RQF7 123 aa8.71□□□□□ -1.01
DDR1-223ENST00000324771 IGLL5B9A064 214 aa8.71□□□□□ -1.01
DDR1-223ENST00000324771 IGHV3-30P01768 117 aa8.71□□□□□ -1.01
DDR1-223ENST00000324771 IGHV3-33P01772 117 aa8.71□□□□□ -1.01
DDR1-223ENST00000324771 IGHV3-30-3P0DP02 117 aa8.71□□□□□ -1.01
DDR1-223ENST00000324771 IGHV3-30-5P0DP03 117 aa8.71□□□□□ -1.01
DDR1-223ENST00000324771 ODF3L2Q3SX64 289 aa8.71□□□□□ -1.01
DDR1-223ENST00000324771 HERVK_113P63121 156 aa8.71□□□□□ -1.02
DDR1-223ENST00000324771 TMEM263Q8WUH6 116 aaKnown RBP8.71□□□□□ -1.02
DDR1-223ENST00000324771 FAM110AQ9BQ89 295 aa8.71□□□□□ -1.02
DDR1-223ENST00000324771 U3KQK5 164 aa8.71□□□□□ -1.02
DDR1-223ENST00000324771 E9PLD3 99 aa8.71□□□□□ -1.02
DDR1-223ENST00000324771 UNC79Q9P2D8 2635 aa8.7□□□□□ -1.02
DDR1-223ENST00000324771 TRAV25A0A0B4J276 109 aa8.7□□□□□ -1.02
DDR1-223ENST00000324771 VSIG2Q96IQ7 327 aa8.7□□□□□ -1.02
DDR1-223ENST00000324771 TIMM17AQ99595 171 aa8.7□□□□□ -1.02
DDR1-223ENST00000324771 INSL3P51460 131 aa8.7□□□□□ -1.02
DDR1-223ENST00000324771 SPANXA1Q9NS26 97 aa8.7□□□□□ -1.02
DDR1-223ENST00000324771 PRB2P02812 416 aaPredicted RBP8.7□□□□□ -1.02
DDR1-223ENST00000324771 FAM222AQ5U5X8 452 aa8.7□□□□□ -1.02
DDR1-223ENST00000324771 CDKN2A-AS1Q9UH64 79 aa8.7□□□□□ -1.02
DDR1-223ENST00000324771 COL6A5A8TX70 2615 aa8.7□□□□□ -1.02
DDR1-223ENST00000324771 NBEAL2Q6ZNJ1 2754 aa8.7□□□□□ -1.02
DDR1-223ENST00000324771 C9orf153Q5TBE3 101 aa8.69□□□□□ -1.02
DDR1-223ENST00000324771 CFAP126Q5VTH2 177 aa8.69□□□□□ -1.02
DDR1-223ENST00000324771 SLC25A29Q8N8R3 303 aa8.69□□□□□ -1.02
DDR1-223ENST00000324771 A0A096LNJ9 63 aa8.69□□□□□ -1.02
DDR1-223ENST00000324771 NEXN-AS1Q8NBZ9 246 aa8.69□□□□□ -1.02
DDR1-223ENST00000324771 TRAV12-1A0A0B4J245 112 aa8.69□□□□□ -1.02
DDR1-223ENST00000324771 ATXN8Q156A1 80 aa8.69□□□□□ -1.02
DDR1-223ENST00000324771 ASH1LQ9NR48 2969 aaKnown RBP8.68□□□□□ -1.02
DDR1-223ENST00000324771 ITPR2Q14571 2701 aa8.68□□□□□ -1.02
DDR1-223ENST00000324771 FOXI1Q12951 378 aa8.68□□□□□ -1.02
DDR1-223ENST00000324771 EDA2RQ9HAV5 297 aa8.68□□□□□ -1.02
DDR1-223ENST00000324771 UBE2DNLQ8IWF7 75 aa8.68□□□□□ -1.02
DDR1-223ENST00000324771 CFC1BP0CG36 223 aa8.68□□□□□ -1.02
DDR1-223ENST00000324771 CFC1P0CG37 223 aa8.68□□□□□ -1.02
DDR1-223ENST00000324771 RNF152Q8N8N0 203 aa8.68□□□□□ -1.02
DDR1-223ENST00000324771 IGLV4-3A0A075B6K6 122 aa8.67□□□□□ -1.02
DDR1-223ENST00000324771 NDUFA7O95182 113 aa8.67□□□□□ -1.02
DDR1-223ENST00000324771 KLK12Q9UKR0 248 aa8.67□□□□□ -1.02
DDR1-223ENST00000324771 ZNF561-AS1K7EIQ3 104 aa8.67□□□□□ -1.02
DDR1-223ENST00000324771 SOCS3O14543 225 aa8.67□□□□□ -1.02
DDR1-223ENST00000324771 ATP5G1P05496 136 aa8.67□□□□□ -1.02
DDR1-223ENST00000324771 SPART-AS1P0CW21 52 aa8.67□□□□□ -1.02
DDR1-223ENST00000324771 SPANXB1Q9NS25 103 aaPredicted RBP8.67□□□□□ -1.02
DDR1-223ENST00000324771 DAZ2Q13117 558 aaKnown RBP8.66□□□□□ -1.02
DDR1-223ENST00000324771 DAZ4Q86SG3 579 aaKnown RBP8.66□□□□□ -1.02
DDR1-223ENST00000324771 CNFNQ9BYD5 112 aa8.66□□□□□ -1.02
DDR1-223ENST00000324771 DAZ3Q9NR90 486 aaKnown RBP8.66□□□□□ -1.02
DDR1-223ENST00000324771 TAL2Q16559 108 aa8.66□□□□□ -1.02
DDR1-223ENST00000324771 OXLD1Q5BKU9 147 aa8.66□□□□□ -1.02
DDR1-223ENST00000324771 POLR2KP53803 58 aaKnown RBP8.66□□□□□ -1.02
DDR1-223ENST00000324771 HILS1P60008 231 aa8.66□□□□□ -1.02
DDR1-223ENST00000324771 C2orf91Q6ZV80 131 aa8.66□□□□□ -1.02
DDR1-223ENST00000324771 CRYBG3Q68DQ2 2970 aa8.66□□□□□ -1.02
DDR1-223ENST00000324771 CRIP2P52943 208 aaPredicted RBP8.65□□□□□ -1.02
DDR1-223ENST00000324771 DNAJC30Q96LL9 226 aa8.65□□□□□ -1.02
DDR1-223ENST00000324771 IGKV2D-24A0A075B6R9 120 aa8.65□□□□□ -1.02
DDR1-223ENST00000324771 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.65□□□□□ -1.02
DDR1-223ENST00000324771 ODF3Q96PU9 254 aa8.65□□□□□ -1.02
DDR1-223ENST00000324771 C15orf53Q8NAA6 179 aa8.65□□□□□ -1.02
DDR1-223ENST00000324771 NTN5Q8WTR8 489 aaPredicted RBP8.65□□□□□ -1.02
DDR1-223ENST00000324771 ZNF22P17026 224 aaPredicted RBP8.65□□□□□ -1.03
DDR1-223ENST00000324771 TRBV27A0A0K0K1C4 114 aa8.64□□□□□ -1.03
DDR1-223ENST00000324771 SLC25A20O43772 301 aa8.64□□□□□ -1.03
DDR1-223ENST00000324771 TSHBP01222 138 aa8.64□□□□□ -1.03
DDR1-223ENST00000324771 RPL32P62910 135 aaKnown RBP8.64□□□□□ -1.03
DDR1-223ENST00000324771 C9orf85Q96MD7 179 aa8.64□□□□□ -1.03
DDR1-223ENST00000324771 TRAV4A0A0B4J268 109 aa8.64□□□□□ -1.03
DDR1-223ENST00000324771 RS1O15537 224 aa8.64□□□□□ -1.03
DDR1-223ENST00000324771 PSCAO43653 123 aa8.63□□□□□ -1.03
DDR1-223ENST00000324771 UTP20O75691 2785 aaKnown RBP8.63□□□□□ -1.03
DDR1-223ENST00000324771 Q9UF83 564 aa8.63□□□□□ -1.03
DDR1-223ENST00000324771 LINC00526Q96FQ7 95 aa8.63□□□□□ -1.03
DDR1-223ENST00000324771 PRO0255Q9UI72 69 aa8.63□□□□□ -1.03
DDR1-223ENST00000324771 IGHV4-4A0A075B6R2 117 aa8.62□□□□□ -1.03
DDR1-223ENST00000324771 HIGD1BQ9P298 99 aa8.62□□□□□ -1.03
DDR1-223ENST00000324771 LAMTOR3Q9UHA4 124 aa8.62□□□□□ -1.03
DDR1-223ENST00000324771 IGHV1-58A0A0C4DH39 117 aa8.62□□□□□ -1.03
DDR1-223ENST00000324771 UFSP1Q6NVU6 142 aa8.62□□□□□ -1.03
DDR1-223ENST00000324771 NDUFA11Q86Y39 141 aa8.62□□□□□ -1.03
DDR1-223ENST00000324771 ZNF580Q9UK33 172 aa8.62□□□□□ -1.03
DDR1-223ENST00000324771 Q6ZSN1 163 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms