RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 PRELID3AQ96N28 172 aa4.53□□□□□ -1.68
CSTF3-201ENST00000323959 FA2HQ7L5A8 372 aa4.53□□□□□ -1.68
CSTF3-201ENST00000323959 CSNK1G2-AS1Q8NCQ2 148 aa4.53□□□□□ -1.68
CSTF3-201ENST00000323959 GTSF1LQ9H1H1 148 aa4.53□□□□□ -1.68
CSTF3-201ENST00000323959 D6R8Y8 96 aa4.53□□□□□ -1.68
CSTF3-201ENST00000323959 SPINK4O60575 86 aa4.53□□□□□ -1.68
CSTF3-201ENST00000323959 ZNF415Q09FC8 603 aa4.53□□□□□ -1.68
CSTF3-201ENST00000323959 DAZ2Q13117 558 aaKnown RBP4.53□□□□□ -1.68
CSTF3-201ENST00000323959 TMEM97Q5BJF2 176 aa4.53□□□□□ -1.68
CSTF3-201ENST00000323959 NFE4Q86UQ8 179 aa4.53□□□□□ -1.68
CSTF3-201ENST00000323959 MAP1LC3AQ9H492 121 aa4.53□□□□□ -1.68
CSTF3-201ENST00000323959 PHLDA3Q9Y5J5 127 aa4.53□□□□□ -1.68
CSTF3-201ENST00000323959 GAGE12HA6NDE8 117 aa4.52□□□□□ -1.69
CSTF3-201ENST00000323959 A8MWV9 139 aa4.52□□□□□ -1.69
CSTF3-201ENST00000323959 M0R2P5 195 aa4.52□□□□□ -1.69
CSTF3-201ENST00000323959 FUSP35637 526 aaKnown RBP eCLIP4.52□□□□□ -1.69
CSTF3-201ENST00000323959 SPANXN1Q5VSR9 72 aa4.52□□□□□ -1.69
CSTF3-201ENST00000323959 LINC00612Q8N6U2 182 aa4.52□□□□□ -1.69
CSTF3-201ENST00000323959 RASL10AQ92737 203 aa4.52□□□□□ -1.69
CSTF3-201ENST00000323959 KRTAP1-5Q9BYS1 174 aa4.52□□□□□ -1.69
CSTF3-201ENST00000323959 HSPB8Q9UJY1 196 aa4.52□□□□□ -1.69
CSTF3-201ENST00000323959 SSPOA2VEC9 5147 aa4.52□□□□□ -1.69
CSTF3-201ENST00000323959 IGHV1-24A0A0C4DH33 117 aa4.52□□□□□ -1.69
CSTF3-201ENST00000323959 SMIM9A6NGZ8 99 aa4.52□□□□□ -1.69
CSTF3-201ENST00000323959 SYS1-DBNDD2H3BUS1 97 aa4.52□□□□□ -1.69
CSTF3-201ENST00000323959 H3BVH4 76 aa4.52□□□□□ -1.69
CSTF3-201ENST00000323959 RHODO00212 210 aa4.52□□□□□ -1.69
CSTF3-201ENST00000323959 TNFRSF6BO95407 300 aa4.52□□□□□ -1.69
CSTF3-201ENST00000323959 GIG44P09565 113 aaPredicted RBP4.52□□□□□ -1.69
CSTF3-201ENST00000323959 CKS2P33552 79 aa4.52□□□□□ -1.69
CSTF3-201ENST00000323959 DNAJC30Q96LL9 226 aa4.52□□□□□ -1.69
CSTF3-201ENST00000323959 AP5S1Q9NUS5 200 aa4.52□□□□□ -1.69
CSTF3-201ENST00000323959 A0A096LNJ9 63 aa4.51□□□□□ -1.69
CSTF3-201ENST00000323959 IGLV5-52A0A0A0MRZ9 124 aa4.51□□□□□ -1.69
CSTF3-201ENST00000323959 TRAV12-3A0A0B4J271 114 aa4.51□□□□□ -1.69
CSTF3-201ENST00000323959 COX8AP10176 69 aa4.51□□□□□ -1.69
CSTF3-201ENST00000323959 STHQ8IWL8 128 aa4.51□□□□□ -1.69
CSTF3-201ENST00000323959 TMEM263Q8WUH6 116 aaKnown RBP4.51□□□□□ -1.69
CSTF3-201ENST00000323959 ZNF479Q96JC4 524 aa4.51□□□□□ -1.69
CSTF3-201ENST00000323959 X6R8D5 127 aa4.51□□□□□ -1.69
CSTF3-201ENST00000323959 TMSB15BA0A087X1C1 80 aa4.51□□□□□ -1.69
CSTF3-201ENST00000323959 GNRH2O43555 120 aa4.51□□□□□ -1.69
CSTF3-201ENST00000323959 CRYGDP07320 174 aa4.51□□□□□ -1.69
CSTF3-201ENST00000323959 S100A4P26447 101 aaKnown RBP4.51□□□□□ -1.69
CSTF3-201ENST00000323959 FCER1GP30273 86 aa4.51□□□□□ -1.69
CSTF3-201ENST00000323959 POLR2KP53803 58 aaKnown RBP4.51□□□□□ -1.69
CSTF3-201ENST00000323959 RPL24P83731 157 aaKnown RBP4.51□□□□□ -1.69
CSTF3-201ENST00000323959 SPINK13Q1W4C9 94 aa4.51□□□□□ -1.69
CSTF3-201ENST00000323959 RNASEKQ6P5S7 137 aaKnown RBP4.51□□□□□ -1.69
CSTF3-201ENST00000323959 UPK3BQ9BT76 320 aa4.51□□□□□ -1.69
CSTF3-201ENST00000323959 GEMIN7Q9H840 131 aaKnown RBP4.51□□□□□ -1.69
CSTF3-201ENST00000323959 Q9H8V8 135 aa4.51□□□□□ -1.69
CSTF3-201ENST00000323959 MSRB1Q9NZV6 116 aa4.51□□□□□ -1.69
CSTF3-201ENST00000323959 SPCS1Q9Y6A9 102 aa4.51□□□□□ -1.69
CSTF3-201ENST00000323959 TRBV27A0A0K0K1C4 114 aa4.5□□□□□ -1.69
CSTF3-201ENST00000323959 A0A1W2PPM0 123 aa4.5□□□□□ -1.69
CSTF3-201ENST00000323959 hDV102S1A0JD36 115 aa4.5□□□□□ -1.69
CSTF3-201ENST00000323959 KNCNA6PVL3 124 aa4.5□□□□□ -1.69
CSTF3-201ENST00000323959 H3BUT2 72 aa4.5□□□□□ -1.69
CSTF3-201ENST00000323959 TSPAN13O95857 204 aa4.5□□□□□ -1.69
CSTF3-201ENST00000323959 NPYP01303 97 aa4.5□□□□□ -1.69
CSTF3-201ENST00000323959 HBDP02042 147 aa4.5□□□□□ -1.69
CSTF3-201ENST00000323959 SPART-AS1P0CW21 52 aa4.5□□□□□ -1.69
CSTF3-201ENST00000323959 FABP2P12104 132 aa4.5□□□□□ -1.69
CSTF3-201ENST00000323959 ORMDL2Q53FV1 153 aa4.5□□□□□ -1.69
CSTF3-201ENST00000323959 Q6ZQT7 251 aa4.5□□□□□ -1.69
CSTF3-201ENST00000323959 C1orf158Q8N1D5 194 aa4.5□□□□□ -1.69
CSTF3-201ENST00000323959 C16orf74Q96GX8 76 aa4.5□□□□□ -1.69
CSTF3-201ENST00000323959 SMIM2Q9BVW6 85 aa4.5□□□□□ -1.69
CSTF3-201ENST00000323959 H7C1H1 209 aa4.5□□□□□ -1.69
CSTF3-201ENST00000323959 DEFB1P60022 68 aa4.5□□□□□ -1.69
CSTF3-201ENST00000323959 LINC01545Q5VT33 79 aa4.5□□□□□ -1.69
CSTF3-201ENST00000323959 MAP1LC3CQ9BXW4 147 aa4.5□□□□□ -1.69
CSTF3-201ENST00000323959 LINC00588Q9Y4M8 146 aa4.5□□□□□ -1.69
CSTF3-201ENST00000323959 SIVA1O15304 175 aa4.49□□□□□ -1.69
CSTF3-201ENST00000323959 LEPROTL1O95214 131 aa4.49□□□□□ -1.69
CSTF3-201ENST00000323959 EVI2AP22794 236 aa4.49□□□□□ -1.69
CSTF3-201ENST00000323959 ODF1Q14990 250 aa4.49□□□□□ -1.69
CSTF3-201ENST00000323959 RHOHQ15669 191 aa4.49□□□□□ -1.69
CSTF3-201ENST00000323959 C2orf91Q6ZV80 131 aa4.49□□□□□ -1.69
CSTF3-201ENST00000323959 MRPL16Q9NX20 251 aaKnown RBP4.49□□□□□ -1.69
CSTF3-201ENST00000323959 TRAV12-1A0A0B4J245 112 aa4.49□□□□□ -1.69
CSTF3-201ENST00000323959 M0QY20 66 aa4.49□□□□□ -1.69
CSTF3-201ENST00000323959 SUMO2P61956 95 aaKnown RBP4.49□□□□□ -1.69
CSTF3-201ENST00000323959 FAM30AQ9NZY2 134 aa4.49□□□□□ -1.69
CSTF3-201ENST00000323959 IGKV3-7A0A075B6H7 116 aa4.48□□□□□ -1.69
CSTF3-201ENST00000323959 TRBV10-1A0A0K0K1A3 114 aa4.48□□□□□ -1.69
CSTF3-201ENST00000323959 PLAC8L1A1L4L8 177 aa4.48□□□□□ -1.69
CSTF3-201ENST00000323959 F8W1H4 67 aa4.48□□□□□ -1.69
CSTF3-201ENST00000323959 NCR2O95944 276 aa4.48□□□□□ -1.69
CSTF3-201ENST00000323959 IFI27P40305 119 aaPredicted RBP4.48□□□□□ -1.69
CSTF3-201ENST00000323959 LAGE3Q14657 143 aa4.48□□□□□ -1.69
CSTF3-201ENST00000323959 PRSS3P2Q8NHM4 247 aa4.48□□□□□ -1.69
CSTF3-201ENST00000323959 TOMM6Q96B49 74 aa4.48□□□□□ -1.69
CSTF3-201ENST00000323959 TRAV4A0A0B4J268 109 aa4.48□□□□□ -1.69
CSTF3-201ENST00000323959 H0Y8G0 127 aa4.48□□□□□ -1.69
CSTF3-201ENST00000323959 ATP5LO75964 103 aa4.48□□□□□ -1.69
CSTF3-201ENST00000323959 IGHV3-53P01767 116 aa4.48□□□□□ -1.69
CSTF3-201ENST00000323959 SUMO4Q6EEV6 95 aa4.48□□□□□ -1.69
CSTF3-201ENST00000323959 TPPP3Q9BW30 176 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 152.8 ms