RNA–Protein interactions for RNA: ENST00000322887.8

SEC24A-201, Transcript of SEC24 homolog A, COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC24A, Length 2,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24A-201ENST00000322887 A6NDX4 124 aa8.88□□□□□ -0.99
SEC24A-201ENST00000322887 MED14OSP0DP75 135 aa8.88□□□□□ -0.99
SEC24A-201ENST00000322887 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.88□□□□□ -0.99
SEC24A-201ENST00000322887 JMJD1CQ15652 2540 aa8.87□□□□□ -0.99
SEC24A-201ENST00000322887 H3BMM0 161 aa8.87□□□□□ -0.99
SEC24A-201ENST00000322887 UBE2WQ96B02 151 aa8.87□□□□□ -0.99
SEC24A-201ENST00000322887 NDUFA12Q9UI09 145 aa8.87□□□□□ -0.99
SEC24A-201ENST00000322887 HIVEP2P31629 2446 aa8.87□□□□□ -0.99
SEC24A-201ENST00000322887 A0A0B4J2C4 111 aa8.87□□□□□ -0.99
SEC24A-201ENST00000322887 VPREB3Q9UKI3 123 aa8.87□□□□□ -0.99
SEC24A-201ENST00000322887 I3L3M4 83 aa8.86□□□□□ -0.99
SEC24A-201ENST00000322887 IFITM1P13164 125 aa8.86□□□□□ -0.99
SEC24A-201ENST00000322887 SYNJ2BPP57105 145 aa8.86□□□□□ -0.99
SEC24A-201ENST00000322887 NSUN5P1Q3KNT7 163 aa8.86□□□□□ -0.99
SEC24A-201ENST00000322887 ANK3Q12955 4377 aaKnown RBP8.86□□□□□ -0.99
SEC24A-201ENST00000322887 TRBV10-2A0A0K0K1G8 114 aa8.86□□□□□ -0.99
SEC24A-201ENST00000322887 TMEM262E9PQX1 116 aa8.86□□□□□ -0.99
SEC24A-201ENST00000322887 IGHV1OR15-1A0A075B7D0 117 aa8.85□□□□□ -0.99
SEC24A-201ENST00000322887 IGHV4-59P01825 116 aa8.85□□□□□ -0.99
SEC24A-201ENST00000322887 RPL13AP40429 203 aaKnown RBP8.85□□□□□ -0.99
SEC24A-201ENST00000322887 HILS1P60008 231 aa8.85□□□□□ -0.99
SEC24A-201ENST00000322887 SHISA2Q6UWI4 295 aa8.85□□□□□ -0.99
SEC24A-201ENST00000322887 A0A0J9YX75 114 aa8.85□□□□□ -0.99
SEC24A-201ENST00000322887 TRBV6-5A0A0K0K1A5 114 aa8.85□□□□□ -0.99
SEC24A-201ENST00000322887 DEFB136Q30KP8 78 aa8.85□□□□□ -0.99
SEC24A-201ENST00000322887 F8P00451 2351 aa8.84□□□□□ -0.99
SEC24A-201ENST00000322887 GAGE12JA6NER3 117 aa8.84□□□□□ -0.99
SEC24A-201ENST00000322887 GAGE7O76087 117 aa8.84□□□□□ -0.99
SEC24A-201ENST00000322887 GAGE12FP0CL80 117 aa8.84□□□□□ -0.99
SEC24A-201ENST00000322887 GAGE12GP0CL81 117 aa8.84□□□□□ -0.99
SEC24A-201ENST00000322887 GAGE12IP0CL82 117 aa8.84□□□□□ -0.99
SEC24A-201ENST00000322887 RPL32P62910 135 aaKnown RBP8.84□□□□□ -0.99
SEC24A-201ENST00000322887 GAGE4Q13068 117 aa8.84□□□□□ -0.99
SEC24A-201ENST00000322887 C18orf65Q6ZTR6 163 aa8.84□□□□□ -0.99
SEC24A-201ENST00000322887 HERV-K104P63124 156 aa8.83□□□□□ -1
SEC24A-201ENST00000322887 COX6A2Q02221 97 aa8.83□□□□□ -1
SEC24A-201ENST00000322887 Q8N2B8 174 aa8.83□□□□□ -1
SEC24A-201ENST00000322887 LINC00467Q9BRT7 94 aa8.83□□□□□ -1
SEC24A-201ENST00000322887 CDKN2A-AS1Q9UH64 79 aa8.83□□□□□ -1
SEC24A-201ENST00000322887 RNASE1P07998 156 aaKnown RBP8.83□□□□□ -1
SEC24A-201ENST00000322887 RS1O15537 224 aa8.82□□□□□ -1
SEC24A-201ENST00000322887 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.82□□□□□ -1
SEC24A-201ENST00000322887 TRBV30A0A0K0K1B3 111 aa8.82□□□□□ -1
SEC24A-201ENST00000322887 DNAJC9-AS1A6NH13 148 aa8.82□□□□□ -1
SEC24A-201ENST00000322887 ID1P41134 155 aa8.82□□□□□ -1
SEC24A-201ENST00000322887 IGLV1-40P01703 118 aa8.82□□□□□ -1
SEC24A-201ENST00000322887 CFHR3Q02985 330 aa8.82□□□□□ -1
SEC24A-201ENST00000322887 RHOHQ15669 191 aa8.82□□□□□ -1
SEC24A-201ENST00000322887 MAST4O15021 2626 aa8.81□□□□□ -1
SEC24A-201ENST00000322887 IGHV1-58A0A0C4DH39 117 aa8.81□□□□□ -1
SEC24A-201ENST00000322887 VSIG2Q96IQ7 327 aa8.81□□□□□ -1
SEC24A-201ENST00000322887 USMG5Q96IX5 58 aa8.81□□□□□ -1
SEC24A-201ENST00000322887 CITED2Q99967 270 aaPredicted RBP8.81□□□□□ -1
SEC24A-201ENST00000322887 ESM1Q9NQ30 184 aa8.81□□□□□ -1
SEC24A-201ENST00000322887 MEIG1Q5JSS6 88 aa8.81□□□□□ -1
SEC24A-201ENST00000322887 SMCR5Q8TEV8 140 aa8.81□□□□□ -1
SEC24A-201ENST00000322887 NSD1Q96L73 2696 aaPredicted RBP8.8□□□□□ -1
SEC24A-201ENST00000322887 SONP18583 2426 aaKnown RBP8.8□□□□□ -1
SEC24A-201ENST00000322887 TRGV11A0A075B6L2 103 aa8.8□□□□□ -1
SEC24A-201ENST00000322887 MRPS36P82909 103 aaKnown RBP8.8□□□□□ -1
SEC24A-201ENST00000322887 MIAQ16674 131 aa8.8□□□□□ -1
SEC24A-201ENST00000322887 CHCHD7Q9BUK0 85 aa8.8□□□□□ -1
SEC24A-201ENST00000322887 TRBV7-9A0A0J9YWB2 115 aa8.8□□□□□ -1
SEC24A-201ENST00000322887 RBMY1BA6NDE4 496 aaKnown RBP8.8□□□□□ -1
SEC24A-201ENST00000322887 RBMY1EA6NEQ0 496 aaKnown RBP8.8□□□□□ -1
SEC24A-201ENST00000322887 RBMY1DP0C7P1 496 aaKnown RBP8.8□□□□□ -1
SEC24A-201ENST00000322887 TMEM61Q8N0U2 210 aa8.8□□□□□ -1
SEC24A-201ENST00000322887 TNFRSF18Q9Y5U5 241 aa8.79□□□□□ -1
SEC24A-201ENST00000322887 FN1P02751 2386 aaKnown RBP8.79□□□□□ -1
SEC24A-201ENST00000322887 HOXD3P31249 432 aaPredicted RBP8.79□□□□□ -1
SEC24A-201ENST00000322887 SOSTDC1Q6X4U4 206 aa8.79□□□□□ -1
SEC24A-201ENST00000322887 UBE2D4Q9Y2X8 147 aa8.79□□□□□ -1
SEC24A-201ENST00000322887 K7EQG2 157 aa8.78□□□□□ -1
SEC24A-201ENST00000322887 SNRPD3P62318 126 aaKnown RBP8.78□□□□□ -1
SEC24A-201ENST00000322887 IGHV3OR16-12A0A075B7B8 117 aa8.78□□□□□ -1
SEC24A-201ENST00000322887 LST1O00453 97 aa8.78□□□□□ -1
SEC24A-201ENST00000322887 LINC00694P0DN24 101 aa8.78□□□□□ -1
SEC24A-201ENST00000322887 DEFB131AP59861 70 aa8.78□□□□□ -1
SEC24A-201ENST00000322887 TMEM101Q96IK0 257 aa8.77□□□□□ -1.01
SEC24A-201ENST00000322887 FAM236AA0A1B0GUQ0 79 aa8.77□□□□□ -1.01
SEC24A-201ENST00000322887 FAM236BA0A1B0GV22 79 aa8.77□□□□□ -1.01
SEC24A-201ENST00000322887 IGHV3-53P01767 116 aa8.77□□□□□ -1.01
SEC24A-201ENST00000322887 C16orf95Q9H693 158 aa8.77□□□□□ -1.01
SEC24A-201ENST00000322887 Q9H8V8 135 aa8.77□□□□□ -1.01
SEC24A-201ENST00000322887 Q9HAA7 133 aa8.77□□□□□ -1.01
SEC24A-201ENST00000322887 TRAV13-1A0A0B4J241 112 aa8.76□□□□□ -1.01
SEC24A-201ENST00000322887 SLURP1P55000 103 aa8.76□□□□□ -1.01
SEC24A-201ENST00000322887 PIK3CD-AS1Q5SR53 167 aa8.76□□□□□ -1.01
SEC24A-201ENST00000322887 FAM218AQ96MZ4 157 aa8.76□□□□□ -1.01
SEC24A-201ENST00000322887 KLK5Q9Y337 293 aaPredicted RBP8.76□□□□□ -1.01
SEC24A-201ENST00000322887 NBEAL2Q6ZNJ1 2754 aa8.76□□□□□ -1.01
SEC24A-201ENST00000322887 PSMB8P28062 276 aa8.76□□□□□ -1.01
SEC24A-201ENST00000322887 ZNF702PQ9H963 129 aa8.76□□□□□ -1.01
SEC24A-201ENST00000322887 BRI3O95415 125 aa8.75□□□□□ -1.01
SEC24A-201ENST00000322887 COX6CP09669 75 aa8.74□□□□□ -1.01
SEC24A-201ENST00000322887 SPANXDQ9BXN6 97 aa8.74□□□□□ -1.01
SEC24A-201ENST00000322887 SPANXCQ9NY87 97 aa8.74□□□□□ -1.01
SEC24A-201ENST00000322887 MTORP42345 2549 aa8.74□□□□□ -1.01
SEC24A-201ENST00000322887 C9orf129Q5T035 196 aaKnown RBP8.74□□□□□ -1.01
SEC24A-201ENST00000322887 IGKV3OR2-268A0A0C4DH90 116 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms