RNA–Protein interactions for RNA: ENST00000318988.10

CTDNEP1-201, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,549 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-201ENST00000318988 MRPS36P82909 103 aaKnown RBP18.76■□□□□ 0.59
CTDNEP1-201ENST00000318988 OPRPNQ99935 248 aaPredicted RBP18.76■□□□□ 0.59
CTDNEP1-201ENST00000318988 VCX2Q9H322 139 aa18.76■□□□□ 0.59
CTDNEP1-201ENST00000318988 Q8N976 141 aa18.75■□□□□ 0.59
CTDNEP1-201ENST00000318988 DYNC2H1Q8NCM8 4307 aaKnown RBP18.75■□□□□ 0.59
CTDNEP1-201ENST00000318988 Q6ZUT4 128 aa18.74■□□□□ 0.59
CTDNEP1-201ENST00000318988 ZNF664Q8N3J9 261 aa18.74■□□□□ 0.59
CTDNEP1-201ENST00000318988 BAALCQ8WXS3 180 aa18.74■□□□□ 0.59
CTDNEP1-201ENST00000318988 IGLV4-60A0A075B6I1 120 aa18.74■□□□□ 0.59
CTDNEP1-201ENST00000318988 TEX43Q6ZNM6 134 aa18.74■□□□□ 0.59
CTDNEP1-201ENST00000318988 UPK3BQ9BT76 320 aa18.74■□□□□ 0.59
CTDNEP1-201ENST00000318988 CDC42SE2Q9NRR3 84 aa18.74■□□□□ 0.59
CTDNEP1-201ENST00000318988 C3orf79P0CE67 100 aa18.73■□□□□ 0.59
CTDNEP1-201ENST00000318988 SIVA1O15304 175 aa18.72■□□□□ 0.59
CTDNEP1-201ENST00000318988 IGHV3-30P01768 117 aa18.72■□□□□ 0.59
CTDNEP1-201ENST00000318988 IGHV3-33P01772 117 aa18.72■□□□□ 0.59
CTDNEP1-201ENST00000318988 ANGP03950 147 aaKnown RBP18.72■□□□□ 0.59
CTDNEP1-201ENST00000318988 IGHV3-30-3P0DP02 117 aa18.72■□□□□ 0.59
CTDNEP1-201ENST00000318988 IGHV3-30-5P0DP03 117 aa18.72■□□□□ 0.59
CTDNEP1-201ENST00000318988 RNASE13Q5GAN3 156 aaKnown RBP18.72■□□□□ 0.59
CTDNEP1-201ENST00000318988 CASC10Q5T4H9 136 aa18.72■□□□□ 0.59
CTDNEP1-201ENST00000318988 SYS1-DBNDD2H3BUS1 97 aa18.71■□□□□ 0.59
CTDNEP1-201ENST00000318988 PMVKQ15126 192 aa18.71■□□□□ 0.59
CTDNEP1-201ENST00000318988 C2orf88Q9BSF0 95 aa18.71■□□□□ 0.59
CTDNEP1-201ENST00000318988 AKR1D1P51857 326 aa18.7■□□□□ 0.58
CTDNEP1-201ENST00000318988 LINC01556Q5JQF7 62 aa18.69■□□□□ 0.58
CTDNEP1-201ENST00000318988 Q8N3U1 123 aa18.69■□□□□ 0.58
CTDNEP1-201ENST00000318988 PET117Q6UWS5 81 aa18.69■□□□□ 0.58
CTDNEP1-201ENST00000318988 CSMD3Q7Z407 3707 aa18.68■□□□□ 0.58
CTDNEP1-201ENST00000318988 DNAH10OSP0CZ25 163 aa18.68■□□□□ 0.58
CTDNEP1-201ENST00000318988 ZC2HC1BQ5TFG8 222 aa18.68■□□□□ 0.58
CTDNEP1-201ENST00000318988 FAM104AQ969W3 186 aa18.68■□□□□ 0.58
CTDNEP1-201ENST00000318988 AMELXQ99217 191 aa18.68■□□□□ 0.58
CTDNEP1-201ENST00000318988 CST9LQ9H4G1 147 aa18.68■□□□□ 0.58
CTDNEP1-201ENST00000318988 Q9H8V8 135 aa18.68■□□□□ 0.58
CTDNEP1-201ENST00000318988 PRSS29PA6NIE9 313 aa18.67■□□□□ 0.58
CTDNEP1-201ENST00000318988 TRAV12-1A0A0B4J245 112 aa18.66■□□□□ 0.58
CTDNEP1-201ENST00000318988 C20orf202A1L168 122 aa18.66■□□□□ 0.58
CTDNEP1-201ENST00000318988 SPATA12Q7Z6I5 190 aa18.66■□□□□ 0.58
CTDNEP1-201ENST00000318988 KLK12Q9UKR0 248 aa18.66■□□□□ 0.58
CTDNEP1-201ENST00000318988 IGKV3OR2-268A0A0C4DH90 116 aa18.65■□□□□ 0.58
CTDNEP1-201ENST00000318988 LINC00269Q8N2A0 174 aa18.65■□□□□ 0.58
CTDNEP1-201ENST00000318988 LOC105371267A0A1B0GV96 52 aa18.64■□□□□ 0.58
CTDNEP1-201ENST00000318988 TRAV9-2A0A087WT02 112 aa18.64■□□□□ 0.57
CTDNEP1-201ENST00000318988 CHTOPQ9Y3Y2 248 aaKnown RBP18.64■□□□□ 0.57
CTDNEP1-201ENST00000318988 CLPSL2Q6UWE3 100 aa18.63■□□□□ 0.57
CTDNEP1-201ENST00000318988 STARD9Q9P2P6 4700 aa18.62■□□□□ 0.57
CTDNEP1-201ENST00000318988 TRAV13-1A0A0B4J241 112 aa18.62■□□□□ 0.57
CTDNEP1-201ENST00000318988 CRPP02741 224 aa18.62■□□□□ 0.57
CTDNEP1-201ENST00000318988 LGALS9CQ6DKI2 356 aa18.62■□□□□ 0.57
CTDNEP1-201ENST00000318988 SCGB1D1O95968 90 aa18.61■□□□□ 0.57
CTDNEP1-201ENST00000318988 REG3AQ06141 175 aa18.61■□□□□ 0.57
CTDNEP1-201ENST00000318988 ODF1Q14990 250 aa18.6■□□□□ 0.57
CTDNEP1-201ENST00000318988 C10orf126Q8N4M7 172 aa18.6■□□□□ 0.57
CTDNEP1-201ENST00000318988 LINC01545Q5VT33 79 aa18.59■□□□□ 0.57
CTDNEP1-201ENST00000318988 F8VRH5 84 aa18.59■□□□□ 0.57
CTDNEP1-201ENST00000318988 UBE2WQ96B02 151 aa18.59■□□□□ 0.57
CTDNEP1-201ENST00000318988 PMCHL2Q9BQD1 86 aa18.59■□□□□ 0.57
CTDNEP1-201ENST00000318988 MRPL35Q9NZE8 188 aaKnown RBP18.59■□□□□ 0.57
CTDNEP1-201ENST00000318988 K7EP13 123 aa18.58■□□□□ 0.56
CTDNEP1-201ENST00000318988 UBE2D1P51668 147 aa18.58■□□□□ 0.56
CTDNEP1-201ENST00000318988 SS18Q15532 418 aa18.58■□□□□ 0.56
CTDNEP1-201ENST00000318988 PLECQ15149 4684 aaKnown RBP18.57■□□□□ 0.56
CTDNEP1-201ENST00000318988 LINC00959A0A1B0GUT2 108 aa18.56■□□□□ 0.56
CTDNEP1-201ENST00000318988 SEC11AP67812 179 aa18.56■□□□□ 0.56
CTDNEP1-201ENST00000318988 PRR34Q9NV39 138 aa18.56■□□□□ 0.56
CTDNEP1-201ENST00000318988 CCL25O15444 150 aa18.55■□□□□ 0.56
CTDNEP1-201ENST00000318988 DPM2O94777 84 aa18.55■□□□□ 0.56
CTDNEP1-201ENST00000318988 PLNP26678 52 aa18.55■□□□□ 0.56
CTDNEP1-201ENST00000318988 JOSD1Q15040 202 aaPredicted RBP18.55■□□□□ 0.56
CTDNEP1-201ENST00000318988 A0A0J9YXV3 536 aa18.54■□□□□ 0.56
CTDNEP1-201ENST00000318988 GEMIN7Q9H840 131 aaKnown RBP18.54■□□□□ 0.56
CTDNEP1-201ENST00000318988 TENM2Q9NT68 2774 aa18.54■□□□□ 0.56
CTDNEP1-201ENST00000318988 ENHOQ6UWT2 76 aa18.54■□□□□ 0.56
CTDNEP1-201ENST00000318988 LY6G6CO95867 125 aa18.53■□□□□ 0.56
CTDNEP1-201ENST00000318988 IGKCP01834 107 aa18.53■□□□□ 0.56
CTDNEP1-201ENST00000318988 MIAQ16674 131 aa18.53■□□□□ 0.56
CTDNEP1-201ENST00000318988 TINCRA0A1B0GVN0 87 aa18.52■□□□□ 0.56
CTDNEP1-201ENST00000318988 TTC32Q5I0X7 151 aa18.52■□□□□ 0.56
CTDNEP1-201ENST00000318988 CHAC1Q9BUX1 264 aa18.52■□□□□ 0.56
CTDNEP1-201ENST00000318988 IGLV4-69A0A075B6H9 119 aa18.51■□□□□ 0.55
CTDNEP1-201ENST00000318988 TRAV8-4A0A0B4J246 113 aa18.51■□□□□ 0.55
CTDNEP1-201ENST00000318988 IBA57-AS1B1ANH7 110 aa18.51■□□□□ 0.55
CTDNEP1-201ENST00000318988 IGLC3P0DOY3 106 aa18.51■□□□□ 0.55
CTDNEP1-201ENST00000318988 TRAV8-3A0A0A6YYJ7 113 aa18.5■□□□□ 0.55
CTDNEP1-201ENST00000318988 HERVK_113P63121 156 aa18.5■□□□□ 0.55
CTDNEP1-201ENST00000318988 LINC00242Q5T6M2 205 aa18.5■□□□□ 0.55
CTDNEP1-201ENST00000318988 IGLV10-54A0A075B6I4 117 aa18.49■□□□□ 0.55
CTDNEP1-201ENST00000318988 FAM19A3Q7Z5A8 133 aa18.49■□□□□ 0.55
CTDNEP1-201ENST00000318988 NFE4Q86UQ8 179 aa18.49■□□□□ 0.55
CTDNEP1-201ENST00000318988 C11orf86A6NJI1 115 aa18.49■□□□□ 0.55
CTDNEP1-201ENST00000318988 PYY3Q5JQD4 70 aa18.49■□□□□ 0.55
CTDNEP1-201ENST00000318988 LINC00476Q8WZB0 136 aa18.49■□□□□ 0.55
CTDNEP1-201ENST00000318988 XCL1P47992 114 aa18.48■□□□□ 0.55
CTDNEP1-201ENST00000318988 CHCHD10Q8WYQ3 142 aaPredicted RBP18.48■□□□□ 0.55
CTDNEP1-201ENST00000318988 Q9HAA7 133 aa18.48■□□□□ 0.55
CTDNEP1-201ENST00000318988 TMEM170BQ5T4T1 132 aa18.47■□□□□ 0.55
CTDNEP1-201ENST00000318988 ATOH7Q8N100 152 aa18.47■□□□□ 0.55
CTDNEP1-201ENST00000318988 LINC00469Q8N7U9 141 aa18.47■□□□□ 0.55
CTDNEP1-201ENST00000318988 NBDYA0A0U1RRE5 68 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms