RNA–Protein interactions for RNA: ENST00000318023.11

CAPN3-201, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 3,172 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-201ENST00000318023 LY6LH3BQJ8 138 aa6.95□□□□□ -1.3
CAPN3-201ENST00000318023 K7EIM0 57 aa6.95□□□□□ -1.3
CAPN3-201ENST00000318023 ECSCRQ19T08 205 aa6.95□□□□□ -1.3
CAPN3-201ENST00000318023 C18orf65Q6ZTR6 163 aa6.95□□□□□ -1.3
CAPN3-201ENST00000318023 LINC01600Q96MT4 127 aa6.95□□□□□ -1.3
CAPN3-201ENST00000318023 TMEM258P61165 79 aa6.95□□□□□ -1.3
CAPN3-201ENST00000318023 DEFB121Q5J5C9 76 aa6.95□□□□□ -1.3
CAPN3-201ENST00000318023 PVRIGQ6DKI7 326 aa6.95□□□□□ -1.3
CAPN3-201ENST00000318023 LINC00336Q6ZUF6 198 aa6.95□□□□□ -1.3
CAPN3-201ENST00000318023 COX6CP09669 75 aa6.94□□□□□ -1.3
CAPN3-201ENST00000318023 PROK1P58294 105 aa6.94□□□□□ -1.3
CAPN3-201ENST00000318023 DEFB136Q30KP8 78 aa6.94□□□□□ -1.3
CAPN3-201ENST00000318023 SDIM1Q6ZPB5 146 aa6.94□□□□□ -1.3
CAPN3-201ENST00000318023 TRBV7-1A0A0A6YYK4 115 aa6.94□□□□□ -1.3
CAPN3-201ENST00000318023 OPRPNQ99935 248 aaPredicted RBP6.94□□□□□ -1.3
CAPN3-201ENST00000318023 F8WDY8 70 aa6.94□□□□□ -1.3
CAPN3-201ENST00000318023 LST1O00453 97 aa6.94□□□□□ -1.3
CAPN3-201ENST00000318023 I3L3M4 83 aa6.93□□□□□ -1.3
CAPN3-201ENST00000318023 ATP5G1P05496 136 aa6.93□□□□□ -1.3
CAPN3-201ENST00000318023 TMEM30BQ3MIR4 351 aa6.93□□□□□ -1.3
CAPN3-201ENST00000318023 TMEM86BQ8N661 226 aa6.93□□□□□ -1.3
CAPN3-201ENST00000318023 MOB4Q9Y3A3 225 aa6.93□□□□□ -1.3
CAPN3-201ENST00000318023 IGHV3-66A0A0C4DH42 116 aa6.93□□□□□ -1.3
CAPN3-201ENST00000318023 TINCRA0A1B0GVN0 87 aa6.93□□□□□ -1.3
CAPN3-201ENST00000318023 ATOX1O00244 68 aa6.93□□□□□ -1.3
CAPN3-201ENST00000318023 SLC50A1Q9BRV3 221 aa6.93□□□□□ -1.3
CAPN3-201ENST00000318023 PEMTQ9UBM1 199 aa6.93□□□□□ -1.3
CAPN3-201ENST00000318023 SMAD5-AS1Q9Y6J3 95 aa6.93□□□□□ -1.3
CAPN3-201ENST00000318023 A0A087WVE0 104 aa6.92□□□□□ -1.3
CAPN3-201ENST00000318023 C5orf38Q86SI9 138 aa6.92□□□□□ -1.3
CAPN3-201ENST00000318023 IGHV3OR16-13A0A075B7E8 117 aa6.92□□□□□ -1.3
CAPN3-201ENST00000318023 IGHV3-74A0A0B4J1X5 117 aa6.92□□□□□ -1.3
CAPN3-201ENST00000318023 PAPPA-AS1Q5QFB9 102 aa6.92□□□□□ -1.3
CAPN3-201ENST00000318023 LINC00574Q9H8X3 128 aa6.92□□□□□ -1.3
CAPN3-201ENST00000318023 IGHV3-11P01762 117 aa6.92□□□□□ -1.3
CAPN3-201ENST00000318023 MALP21145 153 aa6.92□□□□□ -1.3
CAPN3-201ENST00000318023 PFN2P35080 140 aa6.92□□□□□ -1.3
CAPN3-201ENST00000318023 C5orf56Q8N8D9 126 aa6.92□□□□□ -1.3
CAPN3-201ENST00000318023 Q8N9W7 124 aa6.92□□□□□ -1.3
CAPN3-201ENST00000318023 DPH3P1Q9H4G8 78 aa6.92□□□□□ -1.3
CAPN3-201ENST00000318023 MEGF8Q7Z7M0 2845 aa6.91□□□□□ -1.3
CAPN3-201ENST00000318023 IGKV3D-7A0A0C4DH55 119 aa6.91□□□□□ -1.3
CAPN3-201ENST00000318023 IGIPA6NJ69 53 aa6.91□□□□□ -1.3
CAPN3-201ENST00000318023 ACYP1P07311 99 aa6.91□□□□□ -1.3
CAPN3-201ENST00000318023 C8orf31Q8N9H6 132 aa6.91□□□□□ -1.3
CAPN3-201ENST00000318023 A0A0J9YXY3 114 aa6.91□□□□□ -1.3
CAPN3-201ENST00000318023 CRYGBP07316 175 aa6.91□□□□□ -1.3
CAPN3-201ENST00000318023 ADAMTSL4-AS1Q5T5F5 129 aa6.91□□□□□ -1.3
CAPN3-201ENST00000318023 TMEM190Q8WZ59 177 aa6.91□□□□□ -1.3
CAPN3-201ENST00000318023 TIMM21Q9BVV7 248 aa6.91□□□□□ -1.3
CAPN3-201ENST00000318023 AGPAT4-IT1Q9H0P7 198 aa6.91□□□□□ -1.3
CAPN3-201ENST00000318023 PRO0628Q9UI54 55 aa6.91□□□□□ -1.3
CAPN3-201ENST00000318023 ATP6V0E1O15342 81 aa6.9□□□□□ -1.3
CAPN3-201ENST00000318023 NDPQ00604 133 aa6.9□□□□□ -1.3
CAPN3-201ENST00000318023 OXLD1Q5BKU9 147 aa6.9□□□□□ -1.3
CAPN3-201ENST00000318023 DAZ2Q13117 558 aaKnown RBP6.9□□□□□ -1.31
CAPN3-201ENST00000318023 DAZ4Q86SG3 579 aaKnown RBP6.9□□□□□ -1.31
CAPN3-201ENST00000318023 DAND5Q8N907 189 aa6.9□□□□□ -1.31
CAPN3-201ENST00000318023 DCANP1Q8TF63 244 aa6.9□□□□□ -1.31
CAPN3-201ENST00000318023 DAZ1Q9NQZ3 744 aaKnown RBP6.9□□□□□ -1.31
CAPN3-201ENST00000318023 DAZ3Q9NR90 486 aaKnown RBP6.9□□□□□ -1.31
CAPN3-201ENST00000318023 NBR2O15453 112 aa6.9□□□□□ -1.31
CAPN3-201ENST00000318023 ZNF876PQ49A33 203 aa6.9□□□□□ -1.31
CAPN3-201ENST00000318023 LEPROTO15243 131 aa6.89□□□□□ -1.31
CAPN3-201ENST00000318023 PF4P02776 101 aa6.89□□□□□ -1.31
CAPN3-201ENST00000318023 IGF1P05019 195 aa6.89□□□□□ -1.31
CAPN3-201ENST00000318023 HIST1H4AP62805 103 aaKnown RBP6.89□□□□□ -1.31
CAPN3-201ENST00000318023 RPL18AQ02543 176 aaKnown RBP6.89□□□□□ -1.31
CAPN3-201ENST00000318023 LINC00311Q8N616 119 aa6.89□□□□□ -1.31
CAPN3-201ENST00000318023 UPK3BQ9BT76 320 aa6.89□□□□□ -1.31
CAPN3-201ENST00000318023 SORL1Q92673 2214 aa6.89□□□□□ -1.31
CAPN3-201ENST00000318023 IGHV3-49A0A0A0MS15 119 aa6.89□□□□□ -1.31
CAPN3-201ENST00000318023 S100A4P26447 101 aaKnown RBP6.89□□□□□ -1.31
CAPN3-201ENST00000318023 SEC61GP60059 68 aa6.89□□□□□ -1.31
CAPN3-201ENST00000318023 ANK2Q01484 3957 aa6.89□□□□□ -1.31
CAPN3-201ENST00000318023 CXCL5P42830 114 aa6.88□□□□□ -1.31
CAPN3-201ENST00000318023 CIRBPQ14011 172 aaKnown RBP6.88□□□□□ -1.31
CAPN3-201ENST00000318023 PRR9Q5T870 116 aa6.88□□□□□ -1.31
CAPN3-201ENST00000318023 TIRAPP58753 221 aa6.88□□□□□ -1.31
CAPN3-201ENST00000318023 FHL2Q14192 279 aa6.88□□□□□ -1.31
CAPN3-201ENST00000318023 SPANXCQ9NY87 97 aa6.88□□□□□ -1.31
CAPN3-201ENST00000318023 FAM236DA0A1B0GTK5 79 aa6.87□□□□□ -1.31
CAPN3-201ENST00000318023 A8MZ25 164 aa6.87□□□□□ -1.31
CAPN3-201ENST00000318023 FAM236CP0DP71 79 aa6.87□□□□□ -1.31
CAPN3-201ENST00000318023 SYNJ2BPP57105 145 aa6.87□□□□□ -1.31
CAPN3-201ENST00000318023 SERP2Q8N6R1 65 aa6.87□□□□□ -1.31
CAPN3-201ENST00000318023 IGHV7-81A0A0B4J1V7 117 aa6.87□□□□□ -1.31
CAPN3-201ENST00000318023 A0A0J9YXV3 536 aa6.87□□□□□ -1.31
CAPN3-201ENST00000318023 A0A0U1RQV1 116 aa6.87□□□□□ -1.31
CAPN3-201ENST00000318023 NXPH4O95158 308 aa6.87□□□□□ -1.31
CAPN3-201ENST00000318023 HOXD3P31249 432 aaPredicted RBP6.87□□□□□ -1.31
CAPN3-201ENST00000318023 FAM223AQ8IWN6 122 aa6.87□□□□□ -1.31
CAPN3-201ENST00000318023 LITAFQ99732 161 aa6.87□□□□□ -1.31
CAPN3-201ENST00000318023 PHLDA3Q9Y5J5 127 aa6.87□□□□□ -1.31
CAPN3-201ENST00000318023 GPHB5Q86YW7 130 aa6.87□□□□□ -1.31
CAPN3-201ENST00000318023 MUC4Q99102 2169 aa6.86□□□□□ -1.31
CAPN3-201ENST00000318023 IGHV4-4A0A075B6R2 117 aa6.86□□□□□ -1.31
CAPN3-201ENST00000318023 C16orf95Q9H693 158 aa6.86□□□□□ -1.31
CAPN3-201ENST00000318023 SPANXDQ9BXN6 97 aa6.86□□□□□ -1.31
CAPN3-201ENST00000318023 F8W735 103 aaPredicted RBP6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms