RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 TRBV6-8A0A0A6YYG3 113 aa5.32□□□□□ -1.56
CDC42-201ENST00000315554 TMEM262E9PQX1 116 aa5.32□□□□□ -1.56
CDC42-201ENST00000315554 AKR1D1P51857 326 aa5.32□□□□□ -1.56
CDC42-201ENST00000315554 GAGE6Q13070 117 aa5.32□□□□□ -1.56
CDC42-201ENST00000315554 DAZ4Q86SG3 579 aaKnown RBP5.32□□□□□ -1.56
CDC42-201ENST00000315554 C6orf223Q8N319 242 aa5.32□□□□□ -1.56
CDC42-201ENST00000315554 MRAP2Q96G30 205 aa5.32□□□□□ -1.56
CDC42-201ENST00000315554 CHCHD5Q9BSY4 110 aa5.32□□□□□ -1.56
CDC42-201ENST00000315554 DAZ3Q9NR90 486 aaKnown RBP5.32□□□□□ -1.56
CDC42-201ENST00000315554 SDHAF1A6NFY7 115 aa5.31□□□□□ -1.56
CDC42-201ENST00000315554 D6R8Y8 96 aa5.31□□□□□ -1.56
CDC42-201ENST00000315554 NPSP0C0P6 89 aa5.31□□□□□ -1.56
CDC42-201ENST00000315554 ZNF25P17030 456 aaPredicted RBP5.31□□□□□ -1.56
CDC42-201ENST00000315554 GAGE2BQ13066 116 aa5.31□□□□□ -1.56
CDC42-201ENST00000315554 RHEBQ15382 184 aa5.31□□□□□ -1.56
CDC42-201ENST00000315554 GAGE2EQ4V326 116 aa5.31□□□□□ -1.56
CDC42-201ENST00000315554 LINC01556Q5JQF7 62 aa5.31□□□□□ -1.56
CDC42-201ENST00000315554 GAGE2AQ6NT46 116 aa5.31□□□□□ -1.56
CDC42-201ENST00000315554 ATP5L2Q7Z4Y8 100 aa5.31□□□□□ -1.56
CDC42-201ENST00000315554 MRPL52Q86TS9 123 aaKnown RBP5.31□□□□□ -1.56
CDC42-201ENST00000315554 NIT1Q86X76 327 aa5.31□□□□□ -1.56
CDC42-201ENST00000315554 NRACQ8N912 160 aa5.31□□□□□ -1.56
CDC42-201ENST00000315554 BTF3L4Q96K17 158 aa5.31□□□□□ -1.56
CDC42-201ENST00000315554 Q9HAA7 133 aa5.31□□□□□ -1.56
CDC42-201ENST00000315554 ST20Q9HBF5 79 aa5.31□□□□□ -1.56
CDC42-201ENST00000315554 GAGE2DQ9UEU5 116 aa5.31□□□□□ -1.56
CDC42-201ENST00000315554 TRBV25-1A0A075B6N4 114 aa5.3□□□□□ -1.56
CDC42-201ENST00000315554 TRAV9-2A0A087WT02 112 aa5.3□□□□□ -1.56
CDC42-201ENST00000315554 IGHV1-24A0A0C4DH33 117 aa5.3□□□□□ -1.56
CDC42-201ENST00000315554 CKS2P33552 79 aa5.3□□□□□ -1.56
CDC42-201ENST00000315554 AMTP48728 403 aa5.3□□□□□ -1.56
CDC42-201ENST00000315554 MPV17L2Q567V2 206 aa5.3□□□□□ -1.56
CDC42-201ENST00000315554 ATRAIDQ6UW56 229 aa5.3□□□□□ -1.56
CDC42-201ENST00000315554 Q8N976 141 aa5.3□□□□□ -1.56
CDC42-201ENST00000315554 TMEM70Q9BUB7 260 aa5.3□□□□□ -1.56
CDC42-201ENST00000315554 TMEM242Q9NWH2 141 aa5.3□□□□□ -1.56
CDC42-201ENST00000315554 DNAH6Q9C0G6 4158 aa5.3□□□□□ -1.56
CDC42-201ENST00000315554 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.29□□□□□ -1.56
CDC42-201ENST00000315554 A0A087WX48 190 aa5.29□□□□□ -1.56
CDC42-201ENST00000315554 TRBV6-5A0A0K0K1A5 114 aa5.29□□□□□ -1.56
CDC42-201ENST00000315554 IGKV2-29A2NJV5 120 aaPredicted RBP5.29□□□□□ -1.56
CDC42-201ENST00000315554 NPYP01303 97 aa5.29□□□□□ -1.56
CDC42-201ENST00000315554 IQCJQ1A5X6 159 aa5.29□□□□□ -1.56
CDC42-201ENST00000315554 TMEM136Q6ZRR5 245 aa5.29□□□□□ -1.56
CDC42-201ENST00000315554 SVBPQ8N300 66 aa5.29□□□□□ -1.56
CDC42-201ENST00000315554 FRZBQ92765 325 aa5.29□□□□□ -1.56
CDC42-201ENST00000315554 IMMP2LQ96T52 175 aa5.29□□□□□ -1.56
CDC42-201ENST00000315554 TMEM243Q9BU79 118 aa5.29□□□□□ -1.56
CDC42-201ENST00000315554 KLK12Q9UKR0 248 aa5.29□□□□□ -1.56
CDC42-201ENST00000315554 TGIF2-C20orf24A0A0A6YYL0 155 aa5.28□□□□□ -1.56
CDC42-201ENST00000315554 IBA57-AS1B1ANH7 110 aa5.28□□□□□ -1.56
CDC42-201ENST00000315554 I3L3M4 83 aa5.28□□□□□ -1.56
CDC42-201ENST00000315554 TSHBP01222 138 aa5.28□□□□□ -1.56
CDC42-201ENST00000315554 APCSP02743 223 aa5.28□□□□□ -1.56
CDC42-201ENST00000315554 POLR2KP53803 58 aaKnown RBP5.28□□□□□ -1.56
CDC42-201ENST00000315554 KIAA1644Q3SXP7 199 aa5.28□□□□□ -1.56
CDC42-201ENST00000315554 TMEM97Q5BJF2 176 aa5.28□□□□□ -1.56
CDC42-201ENST00000315554 CLPSL2Q6UWE3 100 aa5.28□□□□□ -1.56
CDC42-201ENST00000315554 C10orf126Q8N4M7 172 aa5.28□□□□□ -1.56
CDC42-201ENST00000315554 PRELID3AQ96N28 172 aa5.28□□□□□ -1.56
CDC42-201ENST00000315554 DNAH10Q8IVF4 4471 aa5.28□□□□□ -1.56
CDC42-201ENST00000315554 UBE2L6O14933 153 aa5.27□□□□□ -1.57
CDC42-201ENST00000315554 ANGP03950 147 aaKnown RBP5.27□□□□□ -1.57
CDC42-201ENST00000315554 RPL13AP40429 203 aaKnown RBP5.27□□□□□ -1.57
CDC42-201ENST00000315554 Q6ZRN7 208 aaPredicted RBP5.27□□□□□ -1.57
CDC42-201ENST00000315554 UBE2WQ96B02 151 aa5.27□□□□□ -1.57
CDC42-201ENST00000315554 VPS25Q9BRG1 176 aa5.27□□□□□ -1.57
CDC42-201ENST00000315554 CHCHD7Q9BUK0 85 aa5.27□□□□□ -1.57
CDC42-201ENST00000315554 DNAH2Q9P225 4427 aa5.27□□□□□ -1.57
CDC42-201ENST00000315554 IGLV4-60A0A075B6I1 120 aa5.26□□□□□ -1.57
CDC42-201ENST00000315554 TRAV9-1A0A075B6T8 112 aa5.26□□□□□ -1.57
CDC42-201ENST00000315554 TRBV27A0A0K0K1C4 114 aa5.26□□□□□ -1.57
CDC42-201ENST00000315554 LOC389332A0A1B0GUA5 103 aa5.26□□□□□ -1.57
CDC42-201ENST00000315554 FCER1GP30273 86 aa5.26□□□□□ -1.57
CDC42-201ENST00000315554 UBE2V1Q13404 147 aa5.26□□□□□ -1.57
CDC42-201ENST00000315554 CBLN2Q8IUK8 224 aa5.26□□□□□ -1.57
CDC42-201ENST00000315554 ORMDL3Q8N138 153 aa5.26□□□□□ -1.57
CDC42-201ENST00000315554 EPPK1P58107 5090 aaKnown RBP5.26□□□□□ -1.57
CDC42-201ENST00000315554 TRBV24-1A0A075B6N3 115 aa5.26□□□□□ -1.57
CDC42-201ENST00000315554 PPP1R17O96001 155 aa5.26□□□□□ -1.57
CDC42-201ENST00000315554 ELOBQ15370 118 aa5.26□□□□□ -1.57
CDC42-201ENST00000315554 AMMECR1LQ6DCA0 310 aa5.26□□□□□ -1.57
CDC42-201ENST00000315554 LINC00269Q8N2A0 174 aa5.26□□□□□ -1.57
CDC42-201ENST00000315554 SMIM20Q8N5G0 67 aa5.26□□□□□ -1.57
CDC42-201ENST00000315554 C20orf78Q9BR46 151 aa5.26□□□□□ -1.57
CDC42-201ENST00000315554 SMIM2Q9BVW6 85 aa5.26□□□□□ -1.57
CDC42-201ENST00000315554 IGKV2D-24A0A075B6R9 120 aa5.25□□□□□ -1.57
CDC42-201ENST00000315554 IGKV3OR2-268A0A0C4DH90 116 aa5.25□□□□□ -1.57
CDC42-201ENST00000315554 A0A1B0GVY2 172 aa5.25□□□□□ -1.57
CDC42-201ENST00000315554 PSCAO43653 123 aa5.25□□□□□ -1.57
CDC42-201ENST00000315554 HLA-DQA1P01909 254 aa5.25□□□□□ -1.57
CDC42-201ENST00000315554 CRPP02741 224 aa5.25□□□□□ -1.57
CDC42-201ENST00000315554 FGF6P10767 208 aa5.25□□□□□ -1.57
CDC42-201ENST00000315554 FUSP35637 526 aaKnown RBP eCLIP5.25□□□□□ -1.57
CDC42-201ENST00000315554 ENHOQ6UWT2 76 aa5.25□□□□□ -1.57
CDC42-201ENST00000315554 NFE4Q86UQ8 179 aa5.25□□□□□ -1.57
CDC42-201ENST00000315554 C20orf203Q8NBC4 194 aa5.25□□□□□ -1.57
CDC42-201ENST00000315554 DNAH17Q9UFH2 4485 aa5.24□□□□□ -1.57
CDC42-201ENST00000315554 IGLV10-54A0A075B6I4 117 aa5.24□□□□□ -1.57
CDC42-201ENST00000315554 TRAV8-3A0A0A6YYJ7 113 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms