RNA–Protein interactions for RNA: ENST00000311745.9

RBFOX1-201, Transcript of RNA binding fox-1 homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RBFOX1, Length 3,268 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-201ENST00000311745 IGLV1-40P01703 118 aa7.02□□□□□ -1.29
RBFOX1-201ENST00000311745 IGHG2P01859 326 aa7.02□□□□□ -1.29
RBFOX1-201ENST00000311745 DEFB121Q5J5C9 76 aa7.02□□□□□ -1.29
RBFOX1-201ENST00000311745 CNFNQ9BYD5 112 aa7.02□□□□□ -1.29
RBFOX1-201ENST00000311745 SNURFQ9Y675 71 aa7.02□□□□□ -1.29
RBFOX1-201ENST00000311745 TRAV12-1A0A0B4J245 112 aa7.02□□□□□ -1.29
RBFOX1-201ENST00000311745 HILS1P60008 231 aa7.02□□□□□ -1.29
RBFOX1-201ENST00000311745 BLCAPP62952 87 aa7.02□□□□□ -1.29
RBFOX1-201ENST00000311745 PRR9Q5T870 116 aa7.02□□□□□ -1.29
RBFOX1-201ENST00000311745 WFDC9Q8NEX5 89 aa7.02□□□□□ -1.29
RBFOX1-201ENST00000311745 I3L3M4 83 aa7.01□□□□□ -1.29
RBFOX1-201ENST00000311745 LST1O00453 97 aa7.01□□□□□ -1.29
RBFOX1-201ENST00000311745 DNAL4O96015 105 aa7.01□□□□□ -1.29
RBFOX1-201ENST00000311745 TRGV3P03979 118 aa7.01□□□□□ -1.29
RBFOX1-201ENST00000311745 XCL1P47992 114 aa7.01□□□□□ -1.29
RBFOX1-201ENST00000311745 XCL2Q9UBD3 114 aa7.01□□□□□ -1.29
RBFOX1-201ENST00000311745 CENPEQ02224 2701 aa7.01□□□□□ -1.29
RBFOX1-201ENST00000311745 PRRC2AP48634 2157 aaKnown RBP7□□□□□ -1.29
RBFOX1-201ENST00000311745 IGKV3D-20A0A0C4DH25 116 aa7□□□□□ -1.29
RBFOX1-201ENST00000311745 C2orf66Q6UXQ4 117 aa7□□□□□ -1.29
RBFOX1-201ENST00000311745 IGHV3OR16-13A0A075B7E8 117 aa7□□□□□ -1.29
RBFOX1-201ENST00000311745 IGHV3-74A0A0B4J1X5 117 aa7□□□□□ -1.29
RBFOX1-201ENST00000311745 MSMBP08118 114 aa7□□□□□ -1.29
RBFOX1-201ENST00000311745 HIST2H2BCQ6DN03 193 aa7□□□□□ -1.29
RBFOX1-201ENST00000311745 HIST2H2BDQ6DRA6 164 aa7□□□□□ -1.29
RBFOX1-201ENST00000311745 IGHV3-49A0A0A0MS15 119 aa7□□□□□ -1.29
RBFOX1-201ENST00000311745 TRBV7-6A0A0J9YX20 115 aa7□□□□□ -1.29
RBFOX1-201ENST00000311745 FSHBP01225 129 aa7□□□□□ -1.29
RBFOX1-201ENST00000311745 PDZD2O15018 2839 aa6.99□□□□□ -1.29
RBFOX1-201ENST00000311745 APCP25054 2843 aa6.99□□□□□ -1.29
RBFOX1-201ENST00000311745 IGHV7-4-1A0A0J9YVY3 117 aa6.99□□□□□ -1.29
RBFOX1-201ENST00000311745 LINC01546A6NGU7 62 aa6.99□□□□□ -1.29
RBFOX1-201ENST00000311745 BAALC-AS2P0C853 105 aa6.99□□□□□ -1.29
RBFOX1-201ENST00000311745 KRTAP10-9P60411 292 aa6.99□□□□□ -1.29
RBFOX1-201ENST00000311745 ADAMTSL4-AS1Q5T5F5 129 aa6.99□□□□□ -1.29
RBFOX1-201ENST00000311745 APRG1Q8IVJ8 170 aa6.99□□□□□ -1.29
RBFOX1-201ENST00000311745 IGLV2-18A0A075B6J9 118 aa6.99□□□□□ -1.29
RBFOX1-201ENST00000311745 H3BUX3 64 aa6.99□□□□□ -1.29
RBFOX1-201ENST00000311745 NXPH4O95158 308 aa6.99□□□□□ -1.29
RBFOX1-201ENST00000311745 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.99□□□□□ -1.29
RBFOX1-201ENST00000311745 KRTAP1-3Q8IUG1 177 aa6.98□□□□□ -1.29
RBFOX1-201ENST00000311745 LY6EQ16553 131 aa6.98□□□□□ -1.29
RBFOX1-201ENST00000311745 C10orf99Q6UWK7 81 aa6.98□□□□□ -1.29
RBFOX1-201ENST00000311745 C9orf47Q6ZRZ4 202 aa6.98□□□□□ -1.29
RBFOX1-201ENST00000311745 CACNA1BQ00975 2339 aa6.98□□□□□ -1.29
RBFOX1-201ENST00000311745 DEFB1P60022 68 aa6.98□□□□□ -1.29
RBFOX1-201ENST00000311745 DCANP1Q8TF63 244 aa6.98□□□□□ -1.29
RBFOX1-201ENST00000311745 H3BS24 57 aa6.97□□□□□ -1.29
RBFOX1-201ENST00000311745 CCKP06307 115 aa6.97□□□□□ -1.29
RBFOX1-201ENST00000311745 DAD1P61803 113 aa6.97□□□□□ -1.29
RBFOX1-201ENST00000311745 ZNF843Q8N446 348 aa6.97□□□□□ -1.29
RBFOX1-201ENST00000311745 MRPL53Q96EL3 112 aaKnown RBP6.97□□□□□ -1.29
RBFOX1-201ENST00000311745 LYPD5Q6UWN5 251 aa6.97□□□□□ -1.29
RBFOX1-201ENST00000311745 ZNF580Q9UK33 172 aa6.97□□□□□ -1.29
RBFOX1-201ENST00000311745 A0A087WZ39 114 aa6.96□□□□□ -1.29
RBFOX1-201ENST00000311745 F8WEM9 126 aa6.96□□□□□ -1.29
RBFOX1-201ENST00000311745 INAFM2P0DMQ5 153 aa6.96□□□□□ -1.29
RBFOX1-201ENST00000311745 TEX15Q9BXT5 2789 aa6.96□□□□□ -1.29
RBFOX1-201ENST00000311745 SPANXN1Q5VSR9 72 aa6.96□□□□□ -1.3
RBFOX1-201ENST00000311745 ZNF625Q96I27 306 aaPredicted RBP6.96□□□□□ -1.3
RBFOX1-201ENST00000311745 SMIM2Q9BVW6 85 aa6.96□□□□□ -1.3
RBFOX1-201ENST00000311745 H3BUA1 57 aa6.96□□□□□ -1.3
RBFOX1-201ENST00000311745 RMI2Q96E14 147 aa6.96□□□□□ -1.3
RBFOX1-201ENST00000311745 ANKRD17O75179 2603 aaKnown RBP6.96□□□□□ -1.3
RBFOX1-201ENST00000311745 H7BZZ5 65 aa6.95□□□□□ -1.3
RBFOX1-201ENST00000311745 NDUFA4O00483 81 aa6.95□□□□□ -1.3
RBFOX1-201ENST00000311745 ZFAND2AQ8N6M9 145 aa6.95□□□□□ -1.3
RBFOX1-201ENST00000311745 SPTAN1Q13813 2472 aaKnown RBP6.95□□□□□ -1.3
RBFOX1-201ENST00000311745 DEFB112Q30KQ8 113 aa6.95□□□□□ -1.3
RBFOX1-201ENST00000311745 LINC01600Q96MT4 127 aa6.95□□□□□ -1.3
RBFOX1-201ENST00000311745 C14orf132Q9NPU4 83 aa6.95□□□□□ -1.3
RBFOX1-201ENST00000311745 IGHV4-59P01825 116 aa6.95□□□□□ -1.3
RBFOX1-201ENST00000311745 MAPK1IP1LQ8NDC0 245 aa6.95□□□□□ -1.3
RBFOX1-201ENST00000311745 TOMM6Q96B49 74 aa6.95□□□□□ -1.3
RBFOX1-201ENST00000311745 MUC4Q99102 2169 aa6.94□□□□□ -1.3
RBFOX1-201ENST00000311745 A8MZ25 164 aa6.94□□□□□ -1.3
RBFOX1-201ENST00000311745 B4DSR2 109 aa6.94□□□□□ -1.3
RBFOX1-201ENST00000311745 RNF223E7ERA6 249 aa6.94□□□□□ -1.3
RBFOX1-201ENST00000311745 MGPP08493 103 aa6.94□□□□□ -1.3
RBFOX1-201ENST00000311745 HOXD3P31249 432 aaPredicted RBP6.94□□□□□ -1.3
RBFOX1-201ENST00000311745 Q9HAA7 133 aa6.94□□□□□ -1.3
RBFOX1-201ENST00000311745 ZNF462Q96JM2 2506 aa6.94□□□□□ -1.3
RBFOX1-201ENST00000311745 IGHV4-4A0A075B6R2 117 aa6.94□□□□□ -1.3
RBFOX1-201ENST00000311745 IGHV3-11P01762 117 aa6.94□□□□□ -1.3
RBFOX1-201ENST00000311745 DAND5Q8N907 189 aa6.94□□□□□ -1.3
RBFOX1-201ENST00000311745 COPS9Q8WXC6 57 aa6.94□□□□□ -1.3
RBFOX1-201ENST00000311745 RPL39LQ96EH5 51 aaKnown RBP6.94□□□□□ -1.3
RBFOX1-201ENST00000311745 LINC00846Q9NV44 126 aa6.94□□□□□ -1.3
RBFOX1-201ENST00000311745 ACACBO00763 2458 aa6.93□□□□□ -1.3
RBFOX1-201ENST00000311745 Q9UF83 564 aa6.93□□□□□ -1.3
RBFOX1-201ENST00000311745 PAPPA-AS1Q5QFB9 102 aa6.93□□□□□ -1.3
RBFOX1-201ENST00000311745 USMG5Q96IX5 58 aa6.93□□□□□ -1.3
RBFOX1-201ENST00000311745 C11orf68Q9H3H3 251 aaKnown RBP6.93□□□□□ -1.3
RBFOX1-201ENST00000311745 ZFYVE26Q68DK2 2539 aa6.92□□□□□ -1.3
RBFOX1-201ENST00000311745 IGLV4-69A0A075B6H9 119 aa6.92□□□□□ -1.3
RBFOX1-201ENST00000311745 IGHV4-31P0DP07 118 aa6.92□□□□□ -1.3
RBFOX1-201ENST00000311745 RPL28P46779 137 aaKnown RBP6.92□□□□□ -1.3
RBFOX1-201ENST00000311745 SUMO2P61956 95 aaKnown RBP6.92□□□□□ -1.3
RBFOX1-201ENST00000311745 RPL39P62891 51 aaKnown RBP6.92□□□□□ -1.3
RBFOX1-201ENST00000311745 POLQO75417 2590 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms