RNA–Protein interactions for RNA: ENST00000309246.9

TPT1-201, Transcript of tumor protein, translationally-controlled 1, humanhuman

TSL 1 (best) BASIC

Gene TPT1, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPT1-201ENST00000309246 V9GYV3 84 aa7.76□□□□□ -1.17
TPT1-201ENST00000309246 TGIF2-C20orf24A0A0A6YYL0 155 aa7.75□□□□□ -1.17
TPT1-201ENST00000309246 H7C1H1 209 aa7.75□□□□□ -1.17
TPT1-201ENST00000309246 IGLC6P0CF74 106 aa7.75□□□□□ -1.17
TPT1-201ENST00000309246 FABP9Q0Z7S8 132 aa7.75□□□□□ -1.17
TPT1-201ENST00000309246 Q6ZRU5 148 aa7.75□□□□□ -1.17
TPT1-201ENST00000309246 FAM231DQ6ZW35 169 aa7.75□□□□□ -1.17
TPT1-201ENST00000309246 FER1L6-AS1Q8NA97 138 aa7.75□□□□□ -1.17
TPT1-201ENST00000309246 TMEM243Q9BU79 118 aa7.75□□□□□ -1.17
TPT1-201ENST00000309246 TRBV24-1A0A075B6N3 115 aa7.74□□□□□ -1.17
TPT1-201ENST00000309246 IGHV3-64A0A075B6Q5 118 aa7.74□□□□□ -1.17
TPT1-201ENST00000309246 A0A087WYN8 130 aa7.74□□□□□ -1.17
TPT1-201ENST00000309246 TRAV8-4A0A0B4J246 113 aa7.74□□□□□ -1.17
TPT1-201ENST00000309246 SLPIP03973 132 aa7.74□□□□□ -1.17
TPT1-201ENST00000309246 RPS10P46783 165 aaKnown RBP7.74□□□□□ -1.17
TPT1-201ENST00000309246 DPH3Q96FX2 82 aa7.74□□□□□ -1.17
TPT1-201ENST00000309246 BTF3L4Q96K17 158 aa7.74□□□□□ -1.17
TPT1-201ENST00000309246 AP5S1Q9NUS5 200 aa7.74□□□□□ -1.17
TPT1-201ENST00000309246 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.73□□□□□ -1.17
TPT1-201ENST00000309246 A0A1B0GUV1 79 aa7.73□□□□□ -1.17
TPT1-201ENST00000309246 XKRY2A2RUG3 117 aa7.73□□□□□ -1.17
TPT1-201ENST00000309246 C19orf71A6NCJ1 209 aa7.73□□□□□ -1.17
TPT1-201ENST00000309246 A8MWL6 223 aa7.73□□□□□ -1.17
TPT1-201ENST00000309246 CACNG7P62955 275 aa7.73□□□□□ -1.17
TPT1-201ENST00000309246 RASL11AQ6T310 242 aa7.73□□□□□ -1.17
TPT1-201ENST00000309246 SPACA4Q8TDM5 124 aa7.73□□□□□ -1.17
TPT1-201ENST00000309246 RPS20P60866 119 aaKnown RBP7.72□□□□□ -1.17
TPT1-201ENST00000309246 TSKUQ8WUA8 353 aa7.72□□□□□ -1.17
TPT1-201ENST00000309246 PGLYRP4Q96LB8 373 aa7.72□□□□□ -1.17
TPT1-201ENST00000309246 IMMP2LQ96T52 175 aa7.72□□□□□ -1.17
TPT1-201ENST00000309246 UBR4Q5T4S7 5183 aa7.72□□□□□ -1.17
TPT1-201ENST00000309246 PCP4L1A6NKN8 68 aa7.71□□□□□ -1.18
TPT1-201ENST00000309246 HIGD1CA8MV81 97 aa7.71□□□□□ -1.18
TPT1-201ENST00000309246 UBE2L6O14933 153 aa7.71□□□□□ -1.18
TPT1-201ENST00000309246 TRGC1P0CF51 173 aa7.71□□□□□ -1.18
TPT1-201ENST00000309246 AMTP48728 403 aa7.71□□□□□ -1.18
TPT1-201ENST00000309246 CT83Q5H943 113 aa7.71□□□□□ -1.18
TPT1-201ENST00000309246 MRPL54Q6P161 138 aaKnown RBP7.71□□□□□ -1.18
TPT1-201ENST00000309246 WDR73Q6P4I2 378 aa7.71□□□□□ -1.18
TPT1-201ENST00000309246 C15orf56Q8N910 161 aa7.71□□□□□ -1.18
TPT1-201ENST00000309246 BORCS7Q96B45 105 aa7.71□□□□□ -1.18
TPT1-201ENST00000309246 RNF185Q96GF1 192 aa7.71□□□□□ -1.18
TPT1-201ENST00000309246 DPH3P1Q9H4G8 78 aa7.71□□□□□ -1.18
TPT1-201ENST00000309246 NIT2Q9NQR4 276 aa7.71□□□□□ -1.18
TPT1-201ENST00000309246 NAT8BQ9UHF3 227 aa7.71□□□□□ -1.18
TPT1-201ENST00000309246 IGKV3OR2-268A0A0C4DH90 116 aa7.7□□□□□ -1.18
TPT1-201ENST00000309246 SMIM27A0A1W2PRY6 76 aa7.7□□□□□ -1.18
TPT1-201ENST00000309246 GAGE12HA6NDE8 117 aa7.7□□□□□ -1.18
TPT1-201ENST00000309246 PHOX2AO14813 284 aa7.7□□□□□ -1.18
TPT1-201ENST00000309246 S100A2P29034 98 aa7.7□□□□□ -1.18
TPT1-201ENST00000309246 COTL1Q14019 142 aa7.7□□□□□ -1.18
TPT1-201ENST00000309246 LYZL1Q6UWQ5 148 aa7.7□□□□□ -1.18
TPT1-201ENST00000309246 PLAC8Q9NZF1 115 aa7.7□□□□□ -1.18
TPT1-201ENST00000309246 TRAV9-1A0A075B6T8 112 aa7.69□□□□□ -1.18
TPT1-201ENST00000309246 F2Z2F3 143 aa7.69□□□□□ -1.18
TPT1-201ENST00000309246 NTF3P20783 257 aa7.69□□□□□ -1.18
TPT1-201ENST00000309246 COX6A2Q02221 97 aa7.69□□□□□ -1.18
TPT1-201ENST00000309246 HIGD2BQ4VC39 106 aa7.69□□□□□ -1.18
TPT1-201ENST00000309246 NUP35Q8NFH5 326 aa7.69□□□□□ -1.18
TPT1-201ENST00000309246 HIST1H2BKO60814 126 aa7.68□□□□□ -1.18
TPT1-201ENST00000309246 HIST1H2BJP06899 126 aa7.68□□□□□ -1.18
TPT1-201ENST00000309246 HIST1H2BOP23527 126 aa7.68□□□□□ -1.18
TPT1-201ENST00000309246 HIST1H2BBP33778 126 aa7.68□□□□□ -1.18
TPT1-201ENST00000309246 CAMPP49913 170 aa7.68□□□□□ -1.18
TPT1-201ENST00000309246 NDUFA6P56556 154 aa7.68□□□□□ -1.18
TPT1-201ENST00000309246 HIST1H2BDP58876 126 aa7.68□□□□□ -1.18
TPT1-201ENST00000309246 HIST1H2BCP62807 126 aa7.68□□□□□ -1.18
TPT1-201ENST00000309246 HIST2H2BEQ16778 126 aa7.68□□□□□ -1.18
TPT1-201ENST00000309246 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.68□□□□□ -1.18
TPT1-201ENST00000309246 C7orf33Q8WU49 177 aa7.68□□□□□ -1.18
TPT1-201ENST00000309246 HIST1H2BHQ93079 126 aa7.68□□□□□ -1.18
TPT1-201ENST00000309246 HIST1H2BNQ99877 126 aa7.68□□□□□ -1.18
TPT1-201ENST00000309246 HIST1H2BMQ99879 126 aa7.68□□□□□ -1.18
TPT1-201ENST00000309246 TRAV26-2A0A0B4J265 109 aa7.67□□□□□ -1.18
TPT1-201ENST00000309246 IGKV2-24A0A0C4DH68 120 aa7.67□□□□□ -1.18
TPT1-201ENST00000309246 CTRLP40313 264 aa7.67□□□□□ -1.18
TPT1-201ENST00000309246 MAJINQ3KP22 176 aa7.67□□□□□ -1.18
TPT1-201ENST00000309246 COA6Q5JTJ3 125 aaKnown RBP7.67□□□□□ -1.18
TPT1-201ENST00000309246 CFAP161Q6P656 301 aa7.67□□□□□ -1.18
TPT1-201ENST00000309246 PRSS3P2Q8NHM4 247 aa7.67□□□□□ -1.18
TPT1-201ENST00000309246 GTSF1Q8WW33 167 aa7.67□□□□□ -1.18
TPT1-201ENST00000309246 TRGC2P03986 189 aa7.66□□□□□ -1.18
TPT1-201ENST00000309246 RIGQ13278 110 aa7.66□□□□□ -1.18
TPT1-201ENST00000309246 LCE3BQ5TA77 95 aa7.66□□□□□ -1.18
TPT1-201ENST00000309246 AMMECR1LQ6DCA0 310 aa7.66□□□□□ -1.18
TPT1-201ENST00000309246 HIST3H2BBQ8N257 126 aa7.66□□□□□ -1.18
TPT1-201ENST00000309246 GATD1Q8NB37 220 aa7.66□□□□□ -1.18
TPT1-201ENST00000309246 CHCHD10Q8WYQ3 142 aaPredicted RBP7.66□□□□□ -1.18
TPT1-201ENST00000309246 TRAPPC1Q9Y5R8 145 aa7.66□□□□□ -1.18
TPT1-201ENST00000309246 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.65□□□□□ -1.18
TPT1-201ENST00000309246 A0A1B0GUT8 65 aa7.65□□□□□ -1.18
TPT1-201ENST00000309246 IGKV2-29A2NJV5 120 aaPredicted RBP7.65□□□□□ -1.18
TPT1-201ENST00000309246 FAM231BA6NCW3 169 aa7.65□□□□□ -1.18
TPT1-201ENST00000309246 HBBP68871 147 aa7.65□□□□□ -1.18
TPT1-201ENST00000309246 PRR3P79522 188 aaKnown RBP7.65□□□□□ -1.18
TPT1-201ENST00000309246 ODF1Q14990 250 aa7.65□□□□□ -1.18
TPT1-201ENST00000309246 TWIST1Q15672 202 aa7.65□□□□□ -1.18
TPT1-201ENST00000309246 RNASEKQ6P5S7 137 aaKnown RBP7.65□□□□□ -1.18
TPT1-201ENST00000309246 ATP5L2Q7Z4Y8 100 aa7.65□□□□□ -1.18
TPT1-201ENST00000309246 STPG4Q8N801 248 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms