RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 MRAPQ8TCY5 172 aa8.36□□□□□ -1.07
TRIM40-205ENST00000307859 DNAH3Q8TD57 4116 aa8.35□□□□□ -1.07
TRIM40-205ENST00000307859 E9PLD3 99 aa8.35□□□□□ -1.07
TRIM40-205ENST00000307859 G3V4G9 280 aa8.35□□□□□ -1.07
TRIM40-205ENST00000307859 DEFB4AO15263 64 aa8.35□□□□□ -1.07
TRIM40-205ENST00000307859 SAMD5Q5TGI4 173 aa8.35□□□□□ -1.07
TRIM40-205ENST00000307859 Q6ZUT4 128 aa8.34□□□□□ -1.07
TRIM40-205ENST00000307859 CHAC1Q9BUX1 264 aa8.34□□□□□ -1.07
TRIM40-205ENST00000307859 PRO0255Q9UI72 69 aa8.34□□□□□ -1.07
TRIM40-205ENST00000307859 CSDC2Q9Y534 153 aaKnown RBP8.34□□□□□ -1.07
TRIM40-205ENST00000307859 TMEM97Q5BJF2 176 aa8.33□□□□□ -1.08
TRIM40-205ENST00000307859 WWC2-AS2Q96NR7 200 aa8.33□□□□□ -1.08
TRIM40-205ENST00000307859 TTTY13Q9BZ97 58 aa8.33□□□□□ -1.08
TRIM40-205ENST00000307859 CELA1Q9UNI1 258 aa8.33□□□□□ -1.08
TRIM40-205ENST00000307859 H7C423 109 aa8.32□□□□□ -1.08
TRIM40-205ENST00000307859 HINT1P49773 126 aaPredicted RBP8.32□□□□□ -1.08
TRIM40-205ENST00000307859 HERVK_113P61574 105 aa8.32□□□□□ -1.08
TRIM40-205ENST00000307859 DAD1P61803 113 aa8.32□□□□□ -1.08
TRIM40-205ENST00000307859 SMAGPQ0VAQ4 97 aa8.32□□□□□ -1.08
TRIM40-205ENST00000307859 TMEM243Q9BU79 118 aa8.32□□□□□ -1.08
TRIM40-205ENST00000307859 HIGD1BQ9P298 99 aa8.32□□□□□ -1.08
TRIM40-205ENST00000307859 TENM3Q9P273 2699 aa8.32□□□□□ -1.08
TRIM40-205ENST00000307859 TRBV25-1A0A075B6N4 114 aa8.32□□□□□ -1.08
TRIM40-205ENST00000307859 A0A0J9YXV3 536 aa8.32□□□□□ -1.08
TRIM40-205ENST00000307859 SPART-AS1P0CW21 52 aa8.32□□□□□ -1.08
TRIM40-205ENST00000307859 GYPEP15421 78 aa8.32□□□□□ -1.08
TRIM40-205ENST00000307859 ZNF22P17026 224 aaPredicted RBP8.32□□□□□ -1.08
TRIM40-205ENST00000307859 BATFQ16520 125 aa8.32□□□□□ -1.08
TRIM40-205ENST00000307859 MPV17L2Q567V2 206 aa8.32□□□□□ -1.08
TRIM40-205ENST00000307859 MAPKAPK5-AS1Q8N8E1 139 aa8.32□□□□□ -1.08
TRIM40-205ENST00000307859 TRAV8-6A0A0B4J262 113 aa8.31□□□□□ -1.08
TRIM40-205ENST00000307859 TEX48A0A1B0GUV7 120 aa8.31□□□□□ -1.08
TRIM40-205ENST00000307859 PRB2P02812 416 aaPredicted RBP8.31□□□□□ -1.08
TRIM40-205ENST00000307859 RNASE13Q5GAN3 156 aaKnown RBP8.31□□□□□ -1.08
TRIM40-205ENST00000307859 BVES-AS1Q5T3Y7 98 aa8.31□□□□□ -1.08
TRIM40-205ENST00000307859 TMEM170BQ5T4T1 132 aa8.31□□□□□ -1.08
TRIM40-205ENST00000307859 TRBV6-8A0A0A6YYG3 113 aa8.3□□□□□ -1.08
TRIM40-205ENST00000307859 TMEM223A0PJW6 202 aa8.3□□□□□ -1.08
TRIM40-205ENST00000307859 ATP5G1P05496 136 aa8.3□□□□□ -1.08
TRIM40-205ENST00000307859 UBE2D1P51668 147 aa8.3□□□□□ -1.08
TRIM40-205ENST00000307859 COL5A1-AS1Q5SY13 56 aa8.3□□□□□ -1.08
TRIM40-205ENST00000307859 DGAT2L7PQ6IED9 249 aa8.3□□□□□ -1.08
TRIM40-205ENST00000307859 EPPK1P58107 5090 aaKnown RBP8.3□□□□□ -1.08
TRIM40-205ENST00000307859 MYMXA0A1B0GTQ4 84 aa8.29□□□□□ -1.08
TRIM40-205ENST00000307859 TINCRA0A1B0GVN0 87 aa8.29□□□□□ -1.08
TRIM40-205ENST00000307859 PAX4O43316 350 aa8.29□□□□□ -1.08
TRIM40-205ENST00000307859 HSD52Q0P140 79 aa8.29□□□□□ -1.08
TRIM40-205ENST00000307859 ATP6V0E2Q8NHE4 81 aa8.29□□□□□ -1.08
TRIM40-205ENST00000307859 VSIG2Q96IQ7 327 aa8.29□□□□□ -1.08
TRIM40-205ENST00000307859 A0A1B0GV90 55 aa8.29□□□□□ -1.08
TRIM40-205ENST00000307859 UBE2L6O14933 153 aa8.29□□□□□ -1.08
TRIM40-205ENST00000307859 ZNF25P17030 456 aaPredicted RBP8.29□□□□□ -1.08
TRIM40-205ENST00000307859 FAM19A3Q7Z5A8 133 aa8.29□□□□□ -1.08
TRIM40-205ENST00000307859 OR5A1Q8NGJ0 315 aa8.29□□□□□ -1.08
TRIM40-205ENST00000307859 RETNQ9HD89 108 aa8.29□□□□□ -1.08
TRIM40-205ENST00000307859 CDC42SE2Q9NRR3 84 aa8.29□□□□□ -1.08
TRIM40-205ENST00000307859 C11orf68Q9H3H3 251 aaKnown RBP8.28□□□□□ -1.08
TRIM40-205ENST00000307859 IGLV5-45A0A087WSX0 123 aa8.27□□□□□ -1.09
TRIM40-205ENST00000307859 LEPROTO15243 131 aa8.27□□□□□ -1.09
TRIM40-205ENST00000307859 TIRAPP58753 221 aa8.27□□□□□ -1.09
TRIM40-205ENST00000307859 TSPEAR-AS2P59090 65 aa8.27□□□□□ -1.09
TRIM40-205ENST00000307859 AMMECR1LQ6DCA0 310 aa8.27□□□□□ -1.09
TRIM40-205ENST00000307859 TRAV26-1A0A087WT03 109 aa8.26□□□□□ -1.09
TRIM40-205ENST00000307859 ZNF815PA8K554 130 aa8.26□□□□□ -1.09
TRIM40-205ENST00000307859 TMEM101Q96IK0 257 aa8.26□□□□□ -1.09
TRIM40-205ENST00000307859 J3QQQ9 107 aa8.25□□□□□ -1.09
TRIM40-205ENST00000307859 SEC11AP67812 179 aa8.25□□□□□ -1.09
TRIM40-205ENST00000307859 C12orf74Q32Q52 190 aa8.25□□□□□ -1.09
TRIM40-205ENST00000307859 PLEKHB2Q96CS7 222 aa8.25□□□□□ -1.09
TRIM40-205ENST00000307859 A0A0J9YY99 117 aa8.25□□□□□ -1.09
TRIM40-205ENST00000307859 F5H768 121 aa8.25□□□□□ -1.09
TRIM40-205ENST00000307859 GAGE6Q13070 117 aa8.25□□□□□ -1.09
TRIM40-205ENST00000307859 TAL2Q16559 108 aa8.25□□□□□ -1.09
TRIM40-205ENST00000307859 LINC00242Q5T6M2 205 aa8.25□□□□□ -1.09
TRIM40-205ENST00000307859 ORAOV1Q8WV07 137 aa8.25□□□□□ -1.09
TRIM40-205ENST00000307859 CHCHD5Q9BSY4 110 aa8.25□□□□□ -1.09
TRIM40-205ENST00000307859 GEMIN7Q9H840 131 aaKnown RBP8.25□□□□□ -1.09
TRIM40-205ENST00000307859 LGALS3P17931 250 aaKnown RBP8.24□□□□□ -1.09
TRIM40-205ENST00000307859 HERVK_113P63121 156 aa8.24□□□□□ -1.09
TRIM40-205ENST00000307859 IGLV4-60A0A075B6I1 120 aa8.23□□□□□ -1.09
TRIM40-205ENST00000307859 IGHV1-58A0A0C4DH39 117 aa8.23□□□□□ -1.09
TRIM40-205ENST00000307859 IGHV3-30-3P0DP02 117 aa8.23□□□□□ -1.09
TRIM40-205ENST00000307859 CDKN2A-AS1Q9UH64 79 aa8.23□□□□□ -1.09
TRIM40-205ENST00000307859 K7EIL1 84 aa8.22□□□□□ -1.09
TRIM40-205ENST00000307859 HTN3P15516 51 aa8.22□□□□□ -1.09
TRIM40-205ENST00000307859 COX6A2Q02221 97 aa8.22□□□□□ -1.09
TRIM40-205ENST00000307859 MRPL23Q16540 153 aaKnown RBP8.22□□□□□ -1.09
TRIM40-205ENST00000307859 SH2D6Q7Z4S9 175 aa8.22□□□□□ -1.09
TRIM40-205ENST00000307859 TM2D2Q9BX73 214 aa8.22□□□□□ -1.09
TRIM40-205ENST00000307859 ICOSQ9Y6W8 199 aa8.22□□□□□ -1.09
TRIM40-205ENST00000307859 RYR2Q92736 4967 aa8.22□□□□□ -1.09
TRIM40-205ENST00000307859 IGHV3-64A0A075B6Q5 118 aa8.21□□□□□ -1.09
TRIM40-205ENST00000307859 A0A096LPF7 62 aa8.21□□□□□ -1.09
TRIM40-205ENST00000307859 TRAV8-3A0A0A6YYJ7 113 aa8.21□□□□□ -1.09
TRIM40-205ENST00000307859 TRAV13-1A0A0B4J241 112 aa8.21□□□□□ -1.09
TRIM40-205ENST00000307859 A0A1B0GUV1 79 aa8.21□□□□□ -1.09
TRIM40-205ENST00000307859 C3orf84H3BNL1 204 aa8.21□□□□□ -1.09
TRIM40-205ENST00000307859 H3BRM9 83 aa8.21□□□□□ -1.09
TRIM40-205ENST00000307859 CEND1Q8N111 149 aa8.21□□□□□ -1.09
TRIM40-205ENST00000307859 H3BNG1 76 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms