RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 Q8N2B8 174 aa10.94□□□□□ -0.66
CSDC2-201ENST00000306149 SPANXDQ9BXN6 97 aa10.94□□□□□ -0.66
CSDC2-201ENST00000306149 SPANXCQ9NY87 97 aa10.94□□□□□ -0.66
CSDC2-201ENST00000306149 IGHV1-58A0A0C4DH39 117 aa10.94□□□□□ -0.66
CSDC2-201ENST00000306149 LINC01600Q96MT4 127 aa10.94□□□□□ -0.66
CSDC2-201ENST00000306149 SPANXA1Q9NS26 97 aa10.94□□□□□ -0.66
CSDC2-201ENST00000306149 TINCRA0A1B0GVN0 87 aa10.94□□□□□ -0.66
CSDC2-201ENST00000306149 ATXN8Q156A1 80 aa10.94□□□□□ -0.66
CSDC2-201ENST00000306149 TRBV30A0A0K0K1B3 111 aa10.93□□□□□ -0.66
CSDC2-201ENST00000306149 TMEM262E9PQX1 116 aa10.93□□□□□ -0.66
CSDC2-201ENST00000306149 Q1RN00 199 aa10.93□□□□□ -0.66
CSDC2-201ENST00000306149 SS18L2Q9UHA2 77 aa10.93□□□□□ -0.66
CSDC2-201ENST00000306149 NDUFA12Q9UI09 145 aa10.93□□□□□ -0.66
CSDC2-201ENST00000306149 INSP01308 110 aa10.92□□□□□ -0.66
CSDC2-201ENST00000306149 ODF3L2Q3SX64 289 aa10.92□□□□□ -0.66
CSDC2-201ENST00000306149 IGHV3-53P01767 116 aa10.92□□□□□ -0.66
CSDC2-201ENST00000306149 Q6ZSV7 163 aa10.92□□□□□ -0.66
CSDC2-201ENST00000306149 ZNF843Q8N446 348 aa10.92□□□□□ -0.66
CSDC2-201ENST00000306149 VSIG2Q96IQ7 327 aa10.92□□□□□ -0.66
CSDC2-201ENST00000306149 LINC01620Q4KN68 170 aa10.91□□□□□ -0.66
CSDC2-201ENST00000306149 MIAQ16674 131 aa10.91□□□□□ -0.66
CSDC2-201ENST00000306149 TRIAP1O43715 76 aa10.9□□□□□ -0.66
CSDC2-201ENST00000306149 DAND5Q8N907 189 aa10.9□□□□□ -0.66
CSDC2-201ENST00000306149 TRGV1A0A0A0MS02 117 aa10.9□□□□□ -0.66
CSDC2-201ENST00000306149 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.9□□□□□ -0.66
CSDC2-201ENST00000306149 CDKN2A-AS1Q9UH64 79 aa10.9□□□□□ -0.66
CSDC2-201ENST00000306149 DNAJC30Q96LL9 226 aa10.89□□□□□ -0.67
CSDC2-201ENST00000306149 NDUFA7O95182 113 aa10.89□□□□□ -0.67
CSDC2-201ENST00000306149 KRTAP1-3Q8IUG1 177 aa10.89□□□□□ -0.67
CSDC2-201ENST00000306149 STHQ8IWL8 128 aa10.89□□□□□ -0.67
CSDC2-201ENST00000306149 C1orf158Q8N1D5 194 aa10.89□□□□□ -0.67
CSDC2-201ENST00000306149 RNF183Q96D59 192 aa10.89□□□□□ -0.67
CSDC2-201ENST00000306149 BEAN1Q3B7T3 259 aa10.88□□□□□ -0.67
CSDC2-201ENST00000306149 ZFAND6Q6FIF0 208 aa10.88□□□□□ -0.67
CSDC2-201ENST00000306149 RS1O15537 224 aa10.88□□□□□ -0.67
CSDC2-201ENST00000306149 DGAT2L7PQ6IED9 249 aa10.88□□□□□ -0.67
CSDC2-201ENST00000306149 WFDC11Q8NEX6 87 aa10.88□□□□□ -0.67
CSDC2-201ENST00000306149 ICOSQ9Y6W8 199 aa10.88□□□□□ -0.67
CSDC2-201ENST00000306149 TRBV10-2A0A0K0K1G8 114 aa10.88□□□□□ -0.67
CSDC2-201ENST00000306149 TIMM17BO60830 172 aa10.88□□□□□ -0.67
CSDC2-201ENST00000306149 LINC00694P0DN24 101 aa10.88□□□□□ -0.67
CSDC2-201ENST00000306149 RPL13AP40429 203 aaKnown RBP10.88□□□□□ -0.67
CSDC2-201ENST00000306149 COX6A2Q02221 97 aa10.88□□□□□ -0.67
CSDC2-201ENST00000306149 HIST2H2BCQ6DN03 193 aa10.88□□□□□ -0.67
CSDC2-201ENST00000306149 NTN5Q8WTR8 489 aaPredicted RBP10.87□□□□□ -0.67
CSDC2-201ENST00000306149 TENM4Q6N022 2769 aa10.87□□□□□ -0.67
CSDC2-201ENST00000306149 ITPR2Q14571 2701 aa10.87□□□□□ -0.67
CSDC2-201ENST00000306149 Q6ZTI0 123 aa10.87□□□□□ -0.67
CSDC2-201ENST00000306149 YAE1D1Q9NRH1 226 aa10.87□□□□□ -0.67
CSDC2-201ENST00000306149 A0A0U1RRA0 63 aa10.86□□□□□ -0.67
CSDC2-201ENST00000306149 DNAJC9-AS1A6NH13 148 aa10.86□□□□□ -0.67
CSDC2-201ENST00000306149 ZNF625Q96I27 306 aaPredicted RBP10.86□□□□□ -0.67
CSDC2-201ENST00000306149 ESM1Q9NQ30 184 aa10.86□□□□□ -0.67
CSDC2-201ENST00000306149 FN1P02751 2386 aaKnown RBP10.86□□□□□ -0.67
CSDC2-201ENST00000306149 IGLV5-45A0A087WSX0 123 aa10.85□□□□□ -0.67
CSDC2-201ENST00000306149 CITED1Q99966 193 aa10.85□□□□□ -0.67
CSDC2-201ENST00000306149 CCL24O00175 119 aa10.85□□□□□ -0.67
CSDC2-201ENST00000306149 WFDC10AQ9H1F0 79 aa10.85□□□□□ -0.67
CSDC2-201ENST00000306149 IFITM1P13164 125 aa10.84□□□□□ -0.67
CSDC2-201ENST00000306149 TIRAPP58753 221 aa10.84□□□□□ -0.67
CSDC2-201ENST00000306149 TMEM101Q96IK0 257 aa10.84□□□□□ -0.67
CSDC2-201ENST00000306149 NDUFA1O15239 70 aa10.83□□□□□ -0.68
CSDC2-201ENST00000306149 CITED2Q99967 270 aaPredicted RBP10.83□□□□□ -0.68
CSDC2-201ENST00000306149 TRAV13-1A0A0B4J241 112 aa10.83□□□□□ -0.68
CSDC2-201ENST00000306149 COX6CP09669 75 aa10.83□□□□□ -0.68
CSDC2-201ENST00000306149 SHISA2Q6UWI4 295 aa10.83□□□□□ -0.68
CSDC2-201ENST00000306149 NTM-AS1Q6ZSK4 140 aa10.82□□□□□ -0.68
CSDC2-201ENST00000306149 LRRC75A-AS1Q8N1F1 130 aa10.82□□□□□ -0.68
CSDC2-201ENST00000306149 UBE2WQ96B02 151 aa10.82□□□□□ -0.68
CSDC2-201ENST00000306149 GAGE12JA6NER3 117 aa10.82□□□□□ -0.68
CSDC2-201ENST00000306149 H3BT86 120 aa10.82□□□□□ -0.68
CSDC2-201ENST00000306149 GAGE4Q13068 117 aa10.82□□□□□ -0.68
CSDC2-201ENST00000306149 GAGE5Q13069 117 aa10.82□□□□□ -0.68
CSDC2-201ENST00000306149 NOP10Q9NPE3 64 aaKnown RBP10.82□□□□□ -0.68
CSDC2-201ENST00000306149 TEX49A0A1B0GTD5 131 aa10.82□□□□□ -0.68
CSDC2-201ENST00000306149 PLA2G2AP14555 144 aa10.82□□□□□ -0.68
CSDC2-201ENST00000306149 LINC00242Q5T6M2 205 aa10.82□□□□□ -0.68
CSDC2-201ENST00000306149 H7C423 109 aa10.81□□□□□ -0.68
CSDC2-201ENST00000306149 C2orf82Q6UX34 121 aa10.81□□□□□ -0.68
CSDC2-201ENST00000306149 CLEC2BQ92478 149 aa10.81□□□□□ -0.68
CSDC2-201ENST00000306149 ANAPC13Q9BS18 74 aa10.81□□□□□ -0.68
CSDC2-201ENST00000306149 NBEAL2Q6ZNJ1 2754 aa10.8□□□□□ -0.68
CSDC2-201ENST00000306149 B5MCH6 92 aa10.8□□□□□ -0.68
CSDC2-201ENST00000306149 LST1O00453 97 aa10.8□□□□□ -0.68
CSDC2-201ENST00000306149 TEX29Q8N6K0 151 aa10.8□□□□□ -0.68
CSDC2-201ENST00000306149 Q9H8V8 135 aa10.8□□□□□ -0.68
CSDC2-201ENST00000306149 TRAV8-4A0A0B4J246 113 aa10.79□□□□□ -0.68
CSDC2-201ENST00000306149 IGLV5-39A0A0G2JS06 123 aa10.79□□□□□ -0.68
CSDC2-201ENST00000306149 RPL35AP18077 110 aaKnown RBP10.79□□□□□ -0.68
CSDC2-201ENST00000306149 RPL36AP83881 106 aaKnown RBP10.79□□□□□ -0.68
CSDC2-201ENST00000306149 FAM19A3Q7Z5A8 133 aa10.79□□□□□ -0.68
CSDC2-201ENST00000306149 RPL36ALQ969Q0 106 aaKnown RBP10.79□□□□□ -0.68
CSDC2-201ENST00000306149 K7EQD1 137 aa10.79□□□□□ -0.68
CSDC2-201ENST00000306149 HERVK_113P63121 156 aa10.79□□□□□ -0.68
CSDC2-201ENST00000306149 IL17DQ8TAD2 202 aa10.79□□□□□ -0.68
CSDC2-201ENST00000306149 GCN1Q92616 2671 aaKnown RBP10.79□□□□□ -0.68
CSDC2-201ENST00000306149 SNCGO76070 127 aa10.78□□□□□ -0.68
CSDC2-201ENST00000306149 LOC100131303A0A0U1RQF7 123 aa10.78□□□□□ -0.68
CSDC2-201ENST00000306149 GIG44P09565 113 aaPredicted RBP10.78□□□□□ -0.68
CSDC2-201ENST00000306149 TRAV25A0A0B4J276 109 aa10.77□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms