RNA–Protein interactions for RNA: ENST00000303460.4

HOXC10-201, Transcript of homeobox C10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC10, Length 1,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10-201ENST00000303460 LGALS3P17931 250 aaKnown RBP13.25□□□□□ -0.29
HOXC10-201ENST00000303460 SRSF9Q13242 221 aaKnown RBP eCLIP13.25□□□□□ -0.29
HOXC10-201ENST00000303460 AMELXQ99217 191 aa13.25□□□□□ -0.29
HOXC10-201ENST00000303460 TRBV10-1A0A0K0K1A3 114 aa13.25□□□□□ -0.29
HOXC10-201ENST00000303460 RNF183Q96D59 192 aa13.25□□□□□ -0.29
HOXC10-201ENST00000303460 NBEAL1Q6ZS30 2694 aa13.25□□□□□ -0.29
HOXC10-201ENST00000303460 TRGV2A0A075B6R0 118 aa13.24□□□□□ -0.29
HOXC10-201ENST00000303460 J3QQQ9 107 aa13.24□□□□□ -0.29
HOXC10-201ENST00000303460 LEPROTO15243 131 aa13.24□□□□□ -0.29
HOXC10-201ENST00000303460 C12orf74Q32Q52 190 aa13.24□□□□□ -0.29
HOXC10-201ENST00000303460 OPRPNQ99935 248 aaPredicted RBP13.24□□□□□ -0.29
HOXC10-201ENST00000303460 TMEM223A0PJW6 202 aa13.23□□□□□ -0.29
HOXC10-201ENST00000303460 PHLDA1Q8WV24 401 aaPredicted RBP13.23□□□□□ -0.29
HOXC10-201ENST00000303460 PLEKHB2Q96CS7 222 aa13.23□□□□□ -0.29
HOXC10-201ENST00000303460 IGHV4-28A0A0C4DH34 117 aa13.23□□□□□ -0.29
HOXC10-201ENST00000303460 A0A1B0GWB2 263 aa13.23□□□□□ -0.29
HOXC10-201ENST00000303460 DEFB4AO15263 64 aa13.23□□□□□ -0.29
HOXC10-201ENST00000303460 SPANXB1Q9NS25 103 aaPredicted RBP13.23□□□□□ -0.29
HOXC10-201ENST00000303460 SPCS1Q9Y6A9 102 aa13.23□□□□□ -0.29
HOXC10-201ENST00000303460 MRPS36P82909 103 aaKnown RBP13.22□□□□□ -0.29
HOXC10-201ENST00000303460 SMAGPQ0VAQ4 97 aa13.22□□□□□ -0.29
HOXC10-201ENST00000303460 LINC00612Q8N6U2 182 aa13.22□□□□□ -0.29
HOXC10-201ENST00000303460 CHCHD7Q9BUK0 85 aa13.22□□□□□ -0.29
HOXC10-201ENST00000303460 RPL36AP83881 106 aaKnown RBP13.21□□□□□ -0.29
HOXC10-201ENST00000303460 Q8NAQ8 132 aa13.21□□□□□ -0.29
HOXC10-201ENST00000303460 RPL36ALQ969Q0 106 aaKnown RBP13.21□□□□□ -0.29
HOXC10-201ENST00000303460 DEFB130BP0DP73 79 aa13.21□□□□□ -0.3
HOXC10-201ENST00000303460 DEFB130AP0DP74 79 aa13.21□□□□□ -0.3
HOXC10-201ENST00000303460 ZNF22P17026 224 aaPredicted RBP13.21□□□□□ -0.3
HOXC10-201ENST00000303460 TIMM21Q9BVV7 248 aa13.21□□□□□ -0.3
HOXC10-201ENST00000303460 UBE2D4Q9Y2X8 147 aa13.21□□□□□ -0.3
HOXC10-201ENST00000303460 MGAM2Q2M2H8 2515 aa13.2□□□□□ -0.3
HOXC10-201ENST00000303460 A0A0J9YY99 117 aa13.2□□□□□ -0.3
HOXC10-201ENST00000303460 PRB2P02812 416 aaPredicted RBP13.2□□□□□ -0.3
HOXC10-201ENST00000303460 DAZ4Q86SG3 579 aaKnown RBP13.2□□□□□ -0.3
HOXC10-201ENST00000303460 DAZ3Q9NR90 486 aaKnown RBP13.2□□□□□ -0.3
HOXC10-201ENST00000303460 A0A0J9YXV3 536 aa13.19□□□□□ -0.3
HOXC10-201ENST00000303460 MIFP14174 115 aa13.19□□□□□ -0.3
HOXC10-201ENST00000303460 FAM222AQ5U5X8 452 aa13.19□□□□□ -0.3
HOXC10-201ENST00000303460 SLC25A29Q8N8R3 303 aa13.19□□□□□ -0.3
HOXC10-201ENST00000303460 TINCRA0A1B0GVN0 87 aa13.19□□□□□ -0.3
HOXC10-201ENST00000303460 IGLL5B9A064 214 aa13.19□□□□□ -0.3
HOXC10-201ENST00000303460 K7EQD1 137 aa13.19□□□□□ -0.3
HOXC10-201ENST00000303460 K7ERJ3 54 aa13.19□□□□□ -0.3
HOXC10-201ENST00000303460 RETNQ9HD89 108 aa13.19□□□□□ -0.3
HOXC10-201ENST00000303460 NAA38Q9BRA0 125 aaKnown RBP13.18□□□□□ -0.3
HOXC10-201ENST00000303460 DGAT2L7PQ6IED9 249 aa13.17□□□□□ -0.3
HOXC10-201ENST00000303460 FHL2Q14192 279 aa13.17□□□□□ -0.3
HOXC10-201ENST00000303460 LYRM9A8MSI8 78 aa13.16□□□□□ -0.3
HOXC10-201ENST00000303460 TSPEAR-AS2P59090 65 aa13.15□□□□□ -0.3
HOXC10-201ENST00000303460 CELA1Q9UNI1 258 aa13.15□□□□□ -0.3
HOXC10-201ENST00000303460 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.15□□□□□ -0.3
HOXC10-201ENST00000303460 TRGV4A0A0C4DH28 118 aa13.15□□□□□ -0.3
HOXC10-201ENST00000303460 IGHV3-38A0A0C4DH36 116 aa13.15□□□□□ -0.3
HOXC10-201ENST00000303460 IGKV2-29A2NJV5 120 aaPredicted RBP13.15□□□□□ -0.3
HOXC10-201ENST00000303460 KPRPQ5T749 579 aaPredicted RBP13.15□□□□□ -0.3
HOXC10-201ENST00000303460 FAM104AQ969W3 186 aa13.15□□□□□ -0.3
HOXC10-201ENST00000303460 CSDC2Q9Y534 153 aaKnown RBP13.15□□□□□ -0.3
HOXC10-201ENST00000303460 TMEM238C9JI98 176 aa13.13□□□□□ -0.31
HOXC10-201ENST00000303460 UBE2D1P51668 147 aa13.13□□□□□ -0.31
HOXC10-201ENST00000303460 CEMP1Q6PRD7 247 aaPredicted RBP13.13□□□□□ -0.31
HOXC10-201ENST00000303460 GEMIN7Q9H840 131 aaKnown RBP13.13□□□□□ -0.31
HOXC10-201ENST00000303460 CBY1Q9Y3M2 126 aa13.13□□□□□ -0.31
HOXC10-201ENST00000303460 LOC100131303A0A0U1RQF7 123 aa13.13□□□□□ -0.31
HOXC10-201ENST00000303460 TRBV6-4A0A1B0GX49 114 aa13.13□□□□□ -0.31
HOXC10-201ENST00000303460 K7EIL1 84 aa13.13□□□□□ -0.31
HOXC10-201ENST00000303460 K7ERU9 68 aa13.13□□□□□ -0.31
HOXC10-201ENST00000303460 IGHV1-58A0A0C4DH39 117 aa13.12□□□□□ -0.31
HOXC10-201ENST00000303460 IGHV3-30P01768 117 aa13.12□□□□□ -0.31
HOXC10-201ENST00000303460 IGHV3-30-3P0DP02 117 aa13.12□□□□□ -0.31
HOXC10-201ENST00000303460 IGHV3-30-5P0DP03 117 aa13.12□□□□□ -0.31
HOXC10-201ENST00000303460 GTSF1LQ9H1H1 148 aa13.12□□□□□ -0.31
HOXC10-201ENST00000303460 GAGE12JA6NER3 117 aa13.11□□□□□ -0.31
HOXC10-201ENST00000303460 TIRAPP58753 221 aa13.11□□□□□ -0.31
HOXC10-201ENST00000303460 UBE2D3P61077 147 aa13.11□□□□□ -0.31
HOXC10-201ENST00000303460 UBE2D2P62837 147 aa13.11□□□□□ -0.31
HOXC10-201ENST00000303460 GAGE4Q13068 117 aa13.11□□□□□ -0.31
HOXC10-201ENST00000303460 GAGE5Q13069 117 aa13.11□□□□□ -0.31
HOXC10-201ENST00000303460 GAGE13Q4V321 117 aa13.11□□□□□ -0.31
HOXC10-201ENST00000303460 OCIAD2Q56VL3 154 aa13.11□□□□□ -0.31
HOXC10-201ENST00000303460 LYRM7Q5U5X0 104 aa13.11□□□□□ -0.31
HOXC10-201ENST00000303460 TENM3Q9P273 2699 aa13.1□□□□□ -0.31
HOXC10-201ENST00000303460 RPL24P83731 157 aaKnown RBP13.1□□□□□ -0.31
HOXC10-201ENST00000303460 Q6ZUT4 128 aa13.1□□□□□ -0.31
HOXC10-201ENST00000303460 DAD1P61803 113 aa13.09□□□□□ -0.31
HOXC10-201ENST00000303460 SBSPONQ8IVN8 264 aa13.09□□□□□ -0.31
HOXC10-201ENST00000303460 F8W1H4 67 aa13.09□□□□□ -0.31
HOXC10-201ENST00000303460 H7C423 109 aa13.09□□□□□ -0.31
HOXC10-201ENST00000303460 SPART-AS1P0CW21 52 aa13.09□□□□□ -0.31
HOXC10-201ENST00000303460 HERVK_113P63121 156 aa13.09□□□□□ -0.31
HOXC10-201ENST00000303460 VSIG2Q96IQ7 327 aa13.09□□□□□ -0.31
HOXC10-201ENST00000303460 PGPEP1Q9NXJ5 209 aa13.09□□□□□ -0.31
HOXC10-201ENST00000303460 IGHV3-64A0A075B6Q5 118 aa13.08□□□□□ -0.32
HOXC10-201ENST00000303460 RNASE13Q5GAN3 156 aaKnown RBP13.07□□□□□ -0.32
HOXC10-201ENST00000303460 IGLV5-45A0A087WSX0 123 aa13.07□□□□□ -0.32
HOXC10-201ENST00000303460 FAM19A3Q7Z5A8 133 aa13.07□□□□□ -0.32
HOXC10-201ENST00000303460 UBE2L6O14933 153 aa13.06□□□□□ -0.32
HOXC10-201ENST00000303460 TMEM101Q96IK0 257 aa13.06□□□□□ -0.32
HOXC10-201ENST00000303460 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.05□□□□□ -0.32
HOXC10-201ENST00000303460 A0A0J9YXY3 114 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms