RNA–Protein interactions for RNA: ENST00000301280.9

CHAF1A-201, Transcript of chromatin assembly factor 1 subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHAF1A, Length 3,339 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-201ENST00000301280 TRBV27A0A0K0K1C4 114 aa11.33□□□□□ -0.6
CHAF1A-201ENST00000301280 LGALS9O00182 355 aa11.33□□□□□ -0.6
CHAF1A-201ENST00000301280 CFAP126Q5VTH2 177 aa11.33□□□□□ -0.6
CHAF1A-201ENST00000301280 COL6A5A8TX70 2615 aa11.32□□□□□ -0.6
CHAF1A-201ENST00000301280 A8MTW9 85 aa11.32□□□□□ -0.6
CHAF1A-201ENST00000301280 TMEM141Q96I45 108 aa11.32□□□□□ -0.6
CHAF1A-201ENST00000301280 CDIP1Q9H305 208 aa11.32□□□□□ -0.6
CHAF1A-201ENST00000301280 A6NJY4 79 aa11.32□□□□□ -0.6
CHAF1A-201ENST00000301280 TMEM262E9PQX1 116 aa11.32□□□□□ -0.6
CHAF1A-201ENST00000301280 LINC01006Q8NI28 216 aa11.32□□□□□ -0.6
CHAF1A-201ENST00000301280 CLUHP3Q96NS8 147 aa11.32□□□□□ -0.6
CHAF1A-201ENST00000301280 TRGV4A0A0C4DH28 118 aa11.32□□□□□ -0.6
CHAF1A-201ENST00000301280 A0A0J9YY99 117 aa11.32□□□□□ -0.6
CHAF1A-201ENST00000301280 TRBV6-5A0A0K0K1A5 114 aa11.32□□□□□ -0.6
CHAF1A-201ENST00000301280 FBN1P35555 2871 aaKnown RBP11.32□□□□□ -0.6
CHAF1A-201ENST00000301280 TSPAN13O95857 204 aa11.31□□□□□ -0.6
CHAF1A-201ENST00000301280 ZNF22P17026 224 aaPredicted RBP11.31□□□□□ -0.6
CHAF1A-201ENST00000301280 C4orf3Q8WVX3 66 aa11.31□□□□□ -0.6
CHAF1A-201ENST00000301280 GAGE6Q13070 117 aa11.31□□□□□ -0.6
CHAF1A-201ENST00000301280 LINC00482Q8N8I6 264 aa11.31□□□□□ -0.6
CHAF1A-201ENST00000301280 EDA2RQ9HAV5 297 aa11.31□□□□□ -0.6
CHAF1A-201ENST00000301280 MEIG1Q5JSS6 88 aa11.3□□□□□ -0.6
CHAF1A-201ENST00000301280 NDUFA12Q9UI09 145 aa11.3□□□□□ -0.6
CHAF1A-201ENST00000301280 RHODO00212 210 aa11.3□□□□□ -0.6
CHAF1A-201ENST00000301280 LINC00694P0DN24 101 aa11.3□□□□□ -0.6
CHAF1A-201ENST00000301280 IGHV3-30-3P0DP02 117 aa11.3□□□□□ -0.6
CHAF1A-201ENST00000301280 UBE2D1P51668 147 aa11.3□□□□□ -0.6
CHAF1A-201ENST00000301280 CDKN2A-AS1Q9UH64 79 aa11.3□□□□□ -0.6
CHAF1A-201ENST00000301280 FOXI1Q12951 378 aa11.3□□□□□ -0.6
CHAF1A-201ENST00000301280 UBE2L6O14933 153 aa11.29□□□□□ -0.6
CHAF1A-201ENST00000301280 SCGB1A1P11684 91 aa11.29□□□□□ -0.6
CHAF1A-201ENST00000301280 CARD19Q96LW7 228 aa11.29□□□□□ -0.6
CHAF1A-201ENST00000301280 NSD1Q96L73 2696 aaPredicted RBP11.29□□□□□ -0.6
CHAF1A-201ENST00000301280 A8MWV9 139 aa11.29□□□□□ -0.6
CHAF1A-201ENST00000301280 CHCHD5Q9BSY4 110 aa11.28□□□□□ -0.6
CHAF1A-201ENST00000301280 C9JAW5 83 aa11.28□□□□□ -0.6
CHAF1A-201ENST00000301280 C1orf158Q8N1D5 194 aa11.27□□□□□ -0.6
CHAF1A-201ENST00000301280 Q8N2B8 174 aa11.27□□□□□ -0.6
CHAF1A-201ENST00000301280 EIF4EBP3O60516 100 aaPredicted RBP11.27□□□□□ -0.61
CHAF1A-201ENST00000301280 TIMM17AQ99595 171 aa11.27□□□□□ -0.61
CHAF1A-201ENST00000301280 MT-ATP8P03928 68 aa11.27□□□□□ -0.61
CHAF1A-201ENST00000301280 CFC1BP0CG36 223 aa11.27□□□□□ -0.61
CHAF1A-201ENST00000301280 CFC1P0CG37 223 aa11.27□□□□□ -0.61
CHAF1A-201ENST00000301280 PAPPA-AS1Q5QFB9 102 aa11.27□□□□□ -0.61
CHAF1A-201ENST00000301280 C1QTNF4Q9BXJ3 329 aa11.26□□□□□ -0.61
CHAF1A-201ENST00000301280 UBE2D3P61077 147 aa11.26□□□□□ -0.61
CHAF1A-201ENST00000301280 UBE2D2P62837 147 aa11.26□□□□□ -0.61
CHAF1A-201ENST00000301280 C10orf126Q8N4M7 172 aa11.25□□□□□ -0.61
CHAF1A-201ENST00000301280 SLC25A29Q8N8R3 303 aa11.25□□□□□ -0.61
CHAF1A-201ENST00000301280 J3QKU1 62 aa11.25□□□□□ -0.61
CHAF1A-201ENST00000301280 TCL1BO95988 128 aa11.25□□□□□ -0.61
CHAF1A-201ENST00000301280 XGP55808 180 aa11.25□□□□□ -0.61
CHAF1A-201ENST00000301280 RPL36AP83881 106 aaKnown RBP11.25□□□□□ -0.61
CHAF1A-201ENST00000301280 RPL36ALQ969Q0 106 aaKnown RBP11.25□□□□□ -0.61
CHAF1A-201ENST00000301280 NDUFA11Q86Y39 141 aa11.25□□□□□ -0.61
CHAF1A-201ENST00000301280 KRTAP1-3Q8IUG1 177 aa11.25□□□□□ -0.61
CHAF1A-201ENST00000301280 AMELXQ99217 191 aa11.25□□□□□ -0.61
CHAF1A-201ENST00000301280 ERG28Q9UKR5 140 aa11.25□□□□□ -0.61
CHAF1A-201ENST00000301280 COX6A2Q02221 97 aa11.24□□□□□ -0.61
CHAF1A-201ENST00000301280 J3QR89 54 aa11.24□□□□□ -0.61
CHAF1A-201ENST00000301280 CKS1BP61024 79 aa11.24□□□□□ -0.61
CHAF1A-201ENST00000301280 ADAMTSL4-AS1Q5T5F5 129 aa11.24□□□□□ -0.61
CHAF1A-201ENST00000301280 PRO1854Q9UHT4 67 aa11.24□□□□□ -0.61
CHAF1A-201ENST00000301280 CRLF1O75462 422 aa11.24□□□□□ -0.61
CHAF1A-201ENST00000301280 Q9H8V8 135 aa11.23□□□□□ -0.61
CHAF1A-201ENST00000301280 TRRAPQ9Y4A5 3859 aa11.23□□□□□ -0.61
CHAF1A-201ENST00000301280 INAFM1C9JVW0 142 aa11.23□□□□□ -0.61
CHAF1A-201ENST00000301280 TMEM223A0PJW6 202 aa11.22□□□□□ -0.61
CHAF1A-201ENST00000301280 IGHV3-30P01768 117 aa11.22□□□□□ -0.61
CHAF1A-201ENST00000301280 IGHV3-30-5P0DP03 117 aa11.22□□□□□ -0.61
CHAF1A-201ENST00000301280 RHOHQ15669 191 aa11.22□□□□□ -0.61
CHAF1A-201ENST00000301280 C5orf38Q86SI9 138 aa11.22□□□□□ -0.61
CHAF1A-201ENST00000301280 SPATA3Q8NHX4 192 aa11.22□□□□□ -0.61
CHAF1A-201ENST00000301280 A0A0J9YXY3 114 aa11.22□□□□□ -0.61
CHAF1A-201ENST00000301280 PRIMA1Q86XR5 153 aa11.22□□□□□ -0.61
CHAF1A-201ENST00000301280 PFN2P35080 140 aa11.22□□□□□ -0.61
CHAF1A-201ENST00000301280 CLEC2BQ92478 149 aa11.22□□□□□ -0.61
CHAF1A-201ENST00000301280 TRAV26-1A0A087WT03 109 aa11.21□□□□□ -0.61
CHAF1A-201ENST00000301280 IGLV10-54A0A075B6I4 117 aa11.21□□□□□ -0.62
CHAF1A-201ENST00000301280 PIK3CD-AS1Q5SR53 167 aa11.21□□□□□ -0.62
CHAF1A-201ENST00000301280 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.2□□□□□ -0.62
CHAF1A-201ENST00000301280 LEPROTO15243 131 aa11.2□□□□□ -0.62
CHAF1A-201ENST00000301280 C11orf72Q8NBR9 251 aa11.2□□□□□ -0.62
CHAF1A-201ENST00000301280 CHCHD7Q9BUK0 85 aa11.2□□□□□ -0.62
CHAF1A-201ENST00000301280 DEFB135Q30KP9 77 aa11.19□□□□□ -0.62
CHAF1A-201ENST00000301280 UBE2D4Q9Y2X8 147 aa11.19□□□□□ -0.62
CHAF1A-201ENST00000301280 PKD1L1Q8TDX9 2849 aa11.18□□□□□ -0.62
CHAF1A-201ENST00000301280 LRRC75A-AS1Q8N1F1 130 aa11.18□□□□□ -0.62
CHAF1A-201ENST00000301280 ATP6V0E2Q8NHE4 81 aa11.17□□□□□ -0.62
CHAF1A-201ENST00000301280 CRYBA4P53673 196 aa11.17□□□□□ -0.62
CHAF1A-201ENST00000301280 XCL1P47992 114 aa11.16□□□□□ -0.62
CHAF1A-201ENST00000301280 K7EQD1 137 aa11.16□□□□□ -0.62
CHAF1A-201ENST00000301280 TEN1Q86WV5 123 aa11.16□□□□□ -0.62
CHAF1A-201ENST00000301280 SBSPONQ8IVN8 264 aa11.16□□□□□ -0.62
CHAF1A-201ENST00000301280 ANKRD29Q8N6D5 301 aa11.16□□□□□ -0.62
CHAF1A-201ENST00000301280 FAM104AQ969W3 186 aa11.15□□□□□ -0.62
CHAF1A-201ENST00000301280 NTM-AS1Q6ZSK4 140 aa11.15□□□□□ -0.62
CHAF1A-201ENST00000301280 OR13C6PQ8NH95 151 aa11.15□□□□□ -0.62
CHAF1A-201ENST00000301280 TMEM101Q96IK0 257 aa11.15□□□□□ -0.62
CHAF1A-201ENST00000301280 RPL13AP40429 203 aaKnown RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 132.7 ms