RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 CCL24O00175 119 aa9.85□□□□□ -0.83
CASC4-201ENST00000299957 PIK3CD-AS1Q5SR53 167 aa9.85□□□□□ -0.83
CASC4-201ENST00000299957 Q9UF83 564 aa9.85□□□□□ -0.83
CASC4-201ENST00000299957 TRIAP1O43715 76 aa9.85□□□□□ -0.83
CASC4-201ENST00000299957 BAALC-AS2P0C853 105 aa9.85□□□□□ -0.83
CASC4-201ENST00000299957 GATA3P23771 443 aa9.85□□□□□ -0.83
CASC4-201ENST00000299957 TMEM86BQ8N661 226 aa9.85□□□□□ -0.83
CASC4-201ENST00000299957 ATP5G1P05496 136 aa9.84□□□□□ -0.83
CASC4-201ENST00000299957 WFDC11Q8NEX6 87 aa9.84□□□□□ -0.83
CASC4-201ENST00000299957 GCN1Q92616 2671 aaKnown RBP9.84□□□□□ -0.83
CASC4-201ENST00000299957 PIFOQ8TCI5 191 aa9.84□□□□□ -0.83
CASC4-201ENST00000299957 K7EMT4 169 aa9.84□□□□□ -0.83
CASC4-201ENST00000299957 DCANP1Q8TF63 244 aa9.84□□□□□ -0.83
CASC4-201ENST00000299957 IGHV3-30P01768 117 aa9.83□□□□□ -0.84
CASC4-201ENST00000299957 IGHV3-33P01772 117 aa9.83□□□□□ -0.84
CASC4-201ENST00000299957 IGHV3-30-5P0DP03 117 aa9.83□□□□□ -0.84
CASC4-201ENST00000299957 CLUHP3Q96NS8 147 aa9.83□□□□□ -0.84
CASC4-201ENST00000299957 MAST4O15021 2626 aa9.83□□□□□ -0.84
CASC4-201ENST00000299957 CSMD1Q96PZ7 3565 aa9.83□□□□□ -0.84
CASC4-201ENST00000299957 IGHV1-58A0A0C4DH39 117 aa9.83□□□□□ -0.84
CASC4-201ENST00000299957 SMIM20Q8N5G0 67 aa9.83□□□□□ -0.84
CASC4-201ENST00000299957 VSIG2Q96IQ7 327 aa9.83□□□□□ -0.84
CASC4-201ENST00000299957 TSHBP01222 138 aa9.82□□□□□ -0.84
CASC4-201ENST00000299957 CFAP126Q5VTH2 177 aa9.82□□□□□ -0.84
CASC4-201ENST00000299957 LAMTOR3Q9UHA4 124 aa9.82□□□□□ -0.84
CASC4-201ENST00000299957 IGKV3D-7A0A0C4DH55 119 aa9.82□□□□□ -0.84
CASC4-201ENST00000299957 IGIPA6NJ69 53 aa9.82□□□□□ -0.84
CASC4-201ENST00000299957 LGALS9O00182 355 aa9.82□□□□□ -0.84
CASC4-201ENST00000299957 HERVK_113P63121 156 aa9.82□□□□□ -0.84
CASC4-201ENST00000299957 ZMAT4Q9H898 229 aa9.82□□□□□ -0.84
CASC4-201ENST00000299957 TRBV27A0A0K0K1C4 114 aa9.82□□□□□ -0.84
CASC4-201ENST00000299957 TMEM223A0PJW6 202 aa9.81□□□□□ -0.84
CASC4-201ENST00000299957 CITED2Q99967 270 aaPredicted RBP9.81□□□□□ -0.84
CASC4-201ENST00000299957 MAP6D1Q9H9H5 199 aa9.81□□□□□ -0.84
CASC4-201ENST00000299957 KLLNB2CW77 178 aa9.81□□□□□ -0.84
CASC4-201ENST00000299957 F5H768 121 aa9.81□□□□□ -0.84
CASC4-201ENST00000299957 IGLV4-69A0A075B6H9 119 aa9.81□□□□□ -0.84
CASC4-201ENST00000299957 ANGP03950 147 aaKnown RBP9.81□□□□□ -0.84
CASC4-201ENST00000299957 MIR7-3HGQ8N6C7 128 aa9.81□□□□□ -0.84
CASC4-201ENST00000299957 SPANXA1Q9NS26 97 aa9.81□□□□□ -0.84
CASC4-201ENST00000299957 C9orf153Q5TBE3 101 aa9.8□□□□□ -0.84
CASC4-201ENST00000299957 SND1-IT1Q9HBX3 110 aa9.8□□□□□ -0.84
CASC4-201ENST00000299957 IGHV4-4A0A075B6R2 117 aa9.8□□□□□ -0.84
CASC4-201ENST00000299957 MED14OSP0DP75 135 aa9.8□□□□□ -0.84
CASC4-201ENST00000299957 POM121L12Q8N7R1 296 aa9.8□□□□□ -0.84
CASC4-201ENST00000299957 TRAV4A0A0B4J268 109 aa9.79□□□□□ -0.84
CASC4-201ENST00000299957 LOC100131303A0A0U1RQF7 123 aa9.79□□□□□ -0.84
CASC4-201ENST00000299957 TEP1Q99973 2627 aaKnown RBP9.79□□□□□ -0.84
CASC4-201ENST00000299957 FAM236AA0A1B0GUQ0 79 aa9.79□□□□□ -0.84
CASC4-201ENST00000299957 FAM236BA0A1B0GV22 79 aa9.79□□□□□ -0.84
CASC4-201ENST00000299957 PSMB8P28062 276 aa9.79□□□□□ -0.84
CASC4-201ENST00000299957 PSMG3-AS1Q96PY0 264 aa9.78□□□□□ -0.84
CASC4-201ENST00000299957 KRTAP10-9P60411 292 aa9.78□□□□□ -0.84
CASC4-201ENST00000299957 TEX15Q9BXT5 2789 aa9.78□□□□□ -0.84
CASC4-201ENST00000299957 TRBV10-2A0A0K0K1G8 114 aa9.78□□□□□ -0.84
CASC4-201ENST00000299957 CRYBG3Q68DQ2 2970 aa9.78□□□□□ -0.84
CASC4-201ENST00000299957 SLPIP03973 132 aa9.77□□□□□ -0.85
CASC4-201ENST00000299957 PLA2G2AP14555 144 aa9.77□□□□□ -0.85
CASC4-201ENST00000299957 ADAMTSL4-AS1Q5T5F5 129 aa9.77□□□□□ -0.85
CASC4-201ENST00000299957 Q6ZSN1 163 aa9.77□□□□□ -0.85
CASC4-201ENST00000299957 GYPEP15421 78 aa9.76□□□□□ -0.85
CASC4-201ENST00000299957 SS18Q15532 418 aa9.76□□□□□ -0.85
CASC4-201ENST00000299957 SVEP1Q4LDE5 3571 aa9.76□□□□□ -0.85
CASC4-201ENST00000299957 K7EQD1 137 aa9.76□□□□□ -0.85
CASC4-201ENST00000299957 LECT2O14960 151 aa9.76□□□□□ -0.85
CASC4-201ENST00000299957 MIAQ16674 131 aa9.75□□□□□ -0.85
CASC4-201ENST00000299957 COX8CQ7Z4L0 72 aa9.75□□□□□ -0.85
CASC4-201ENST00000299957 UBE2D1P51668 147 aa9.74□□□□□ -0.85
CASC4-201ENST00000299957 HAMPP81172 84 aa9.74□□□□□ -0.85
CASC4-201ENST00000299957 UBR5O95071 2799 aaPredicted RBP9.74□□□□□ -0.85
CASC4-201ENST00000299957 IGLV1-40P01703 118 aa9.74□□□□□ -0.85
CASC4-201ENST00000299957 LINC00526Q96FQ7 95 aa9.74□□□□□ -0.85
CASC4-201ENST00000299957 DEFB113Q30KQ7 82 aa9.74□□□□□ -0.85
CASC4-201ENST00000299957 HELZ2Q9BYK8 2649 aaKnown RBP9.74□□□□□ -0.85
CASC4-201ENST00000299957 SOCS3O14543 225 aa9.73□□□□□ -0.85
CASC4-201ENST00000299957 C14orf132Q9NPU4 83 aa9.73□□□□□ -0.85
CASC4-201ENST00000299957 J3QLI3 93 aa9.73□□□□□ -0.85
CASC4-201ENST00000299957 DEFB114Q30KQ6 69 aa9.73□□□□□ -0.85
CASC4-201ENST00000299957 C9orf85Q96MD7 179 aa9.73□□□□□ -0.85
CASC4-201ENST00000299957 MRPL23Q16540 153 aaKnown RBP9.72□□□□□ -0.85
CASC4-201ENST00000299957 LINC00694P0DN24 101 aa9.72□□□□□ -0.85
CASC4-201ENST00000299957 UTP20O75691 2785 aaKnown RBP9.72□□□□□ -0.85
CASC4-201ENST00000299957 SMCPP49901 116 aaPredicted RBP9.72□□□□□ -0.85
CASC4-201ENST00000299957 DEFB135Q30KP9 77 aa9.72□□□□□ -0.85
CASC4-201ENST00000299957 COL27A1Q8IZC6 1860 aaPredicted RBP9.71□□□□□ -0.85
CASC4-201ENST00000299957 DAD1P61803 113 aa9.71□□□□□ -0.85
CASC4-201ENST00000299957 DAZ2Q13117 558 aaKnown RBP9.71□□□□□ -0.85
CASC4-201ENST00000299957 DAZ4Q86SG3 579 aaKnown RBP9.71□□□□□ -0.85
CASC4-201ENST00000299957 LINC00308Q8TCZ7 52 aa9.71□□□□□ -0.85
CASC4-201ENST00000299957 DAZ3Q9NR90 486 aaKnown RBP9.71□□□□□ -0.85
CASC4-201ENST00000299957 NBEAL1Q6ZS30 2694 aa9.71□□□□□ -0.86
CASC4-201ENST00000299957 COX7B2Q8TF08 81 aa9.71□□□□□ -0.86
CASC4-201ENST00000299957 A0A0B4J2C4 111 aa9.7□□□□□ -0.86
CASC4-201ENST00000299957 DCHS2Q6V1P9 2916 aa9.7□□□□□ -0.86
CASC4-201ENST00000299957 TRAV13-2A0A0B4J235 113 aa9.7□□□□□ -0.86
CASC4-201ENST00000299957 INAFM2P0DMQ5 153 aa9.7□□□□□ -0.86
CASC4-201ENST00000299957 NDUFV3P56181 108 aaKnown RBP9.7□□□□□ -0.86
CASC4-201ENST00000299957 COX6A2Q02221 97 aa9.7□□□□□ -0.86
CASC4-201ENST00000299957 TMEM263Q8WUH6 116 aaKnown RBP9.7□□□□□ -0.86
CASC4-201ENST00000299957 NF1P21359 2839 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms