RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 GAGE13Q4V321 117 aa8.41□□□□□ -1.06
RHO-201ENST00000296271 ZNF418Q8TF45 676 aaPredicted RBP8.41□□□□□ -1.06
RHO-201ENST00000296271 LEPROTO15243 131 aa8.41□□□□□ -1.06
RHO-201ENST00000296271 TSPAN13O95857 204 aa8.41□□□□□ -1.06
RHO-201ENST00000296271 CFC1BP0CG36 223 aa8.41□□□□□ -1.06
RHO-201ENST00000296271 CFC1P0CG37 223 aa8.41□□□□□ -1.06
RHO-201ENST00000296271 UBE2D1P51668 147 aa8.41□□□□□ -1.06
RHO-201ENST00000296271 NPC2P61916 151 aa8.41□□□□□ -1.06
RHO-201ENST00000296271 TEX29Q8N6K0 151 aa8.41□□□□□ -1.06
RHO-201ENST00000296271 SH2D6Q7Z4S9 175 aa8.4□□□□□ -1.06
RHO-201ENST00000296271 PYGO1Q9Y3Y4 419 aa8.4□□□□□ -1.06
RHO-201ENST00000296271 MRPS36P82909 103 aaKnown RBP8.4□□□□□ -1.07
RHO-201ENST00000296271 INAFM1C9JVW0 142 aa8.39□□□□□ -1.07
RHO-201ENST00000296271 RPL24P83731 157 aaKnown RBP8.39□□□□□ -1.07
RHO-201ENST00000296271 TMEM263Q8WUH6 116 aaKnown RBP8.39□□□□□ -1.07
RHO-201ENST00000296271 VPS25Q9BRG1 176 aa8.39□□□□□ -1.07
RHO-201ENST00000296271 CDKN2A-AS1Q9UH64 79 aa8.39□□□□□ -1.07
RHO-201ENST00000296271 TEP1Q99973 2627 aaKnown RBP8.39□□□□□ -1.07
RHO-201ENST00000296271 LOC107984156A0A0G2JMH3 177 aa8.39□□□□□ -1.07
RHO-201ENST00000296271 TEX48A0A1B0GUV7 120 aa8.39□□□□□ -1.07
RHO-201ENST00000296271 ADAMTSL4-AS1Q5T5F5 129 aa8.39□□□□□ -1.07
RHO-201ENST00000296271 NDUFA11Q86Y39 141 aa8.39□□□□□ -1.07
RHO-201ENST00000296271 ARL17AQ8IVW1 177 aa8.39□□□□□ -1.07
RHO-201ENST00000296271 CSNK1G2-AS1Q8NCQ2 148 aa8.39□□□□□ -1.07
RHO-201ENST00000296271 CLUHP3Q96NS8 147 aa8.39□□□□□ -1.07
RHO-201ENST00000296271 TIMM21Q9BVV7 248 aa8.39□□□□□ -1.07
RHO-201ENST00000296271 A4D1N5 150 aa8.38□□□□□ -1.07
RHO-201ENST00000296271 H7C2G1 150 aa8.38□□□□□ -1.07
RHO-201ENST00000296271 PIK3CD-AS1Q5SR53 167 aa8.38□□□□□ -1.07
RHO-201ENST00000296271 MUSTN1Q8IVN3 82 aa8.38□□□□□ -1.07
RHO-201ENST00000296271 DAND5Q8N907 189 aa8.38□□□□□ -1.07
RHO-201ENST00000296271 PTH2Q96A98 100 aa8.38□□□□□ -1.07
RHO-201ENST00000296271 FLNBO75369 2602 aaKnown RBP8.38□□□□□ -1.07
RHO-201ENST00000296271 A0A0J9YXY3 114 aa8.38□□□□□ -1.07
RHO-201ENST00000296271 TRGV2A0A075B6R0 118 aa8.37□□□□□ -1.07
RHO-201ENST00000296271 K7EQD1 137 aa8.37□□□□□ -1.07
RHO-201ENST00000296271 TRAV13-1A0A0B4J241 112 aa8.36□□□□□ -1.07
RHO-201ENST00000296271 ETDBQ3ZM63 59 aa8.36□□□□□ -1.07
RHO-201ENST00000296271 DGAT2L7PQ6IED9 249 aa8.36□□□□□ -1.07
RHO-201ENST00000296271 LINC00482Q8N8I6 264 aa8.36□□□□□ -1.07
RHO-201ENST00000296271 SPANXA1Q9NS26 97 aa8.36□□□□□ -1.07
RHO-201ENST00000296271 A0A0U1RRA0 63 aa8.36□□□□□ -1.07
RHO-201ENST00000296271 PSMB2P49721 201 aa8.36□□□□□ -1.07
RHO-201ENST00000296271 INSL3P51460 131 aa8.36□□□□□ -1.07
RHO-201ENST00000296271 ZNF625Q96I27 306 aaPredicted RBP8.36□□□□□ -1.07
RHO-201ENST00000296271 DNAJC30Q96LL9 226 aa8.36□□□□□ -1.07
RHO-201ENST00000296271 LITAFQ99732 161 aa8.36□□□□□ -1.07
RHO-201ENST00000296271 SPANXB1Q9NS25 103 aaPredicted RBP8.36□□□□□ -1.07
RHO-201ENST00000296271 PRSS2P07478 247 aa8.35□□□□□ -1.07
RHO-201ENST00000296271 TRAV4A0A0B4J268 109 aa8.35□□□□□ -1.07
RHO-201ENST00000296271 IGHV1-58A0A0C4DH39 117 aa8.35□□□□□ -1.07
RHO-201ENST00000296271 TINCRA0A1B0GVN0 87 aa8.35□□□□□ -1.07
RHO-201ENST00000296271 PF4P02776 101 aa8.35□□□□□ -1.07
RHO-201ENST00000296271 VSIG2Q96IQ7 327 aa8.35□□□□□ -1.07
RHO-201ENST00000296271 GEMIN7Q9H840 131 aaKnown RBP8.35□□□□□ -1.07
RHO-201ENST00000296271 NDUFA12Q9UI09 145 aa8.35□□□□□ -1.07
RHO-201ENST00000296271 PRO0461Q9UI25 63 aa8.35□□□□□ -1.07
RHO-201ENST00000296271 K7ERU9 68 aa8.34□□□□□ -1.07
RHO-201ENST00000296271 DEFB130BP0DP73 79 aa8.34□□□□□ -1.07
RHO-201ENST00000296271 DEFB130AP0DP74 79 aa8.34□□□□□ -1.07
RHO-201ENST00000296271 SMCPP49901 116 aaPredicted RBP8.34□□□□□ -1.07
RHO-201ENST00000296271 UBE2D3P61077 147 aa8.34□□□□□ -1.07
RHO-201ENST00000296271 UBE2D2P62837 147 aa8.34□□□□□ -1.07
RHO-201ENST00000296271 RPL36AP83881 106 aaKnown RBP8.34□□□□□ -1.07
RHO-201ENST00000296271 RPL36ALQ969Q0 106 aaKnown RBP8.34□□□□□ -1.07
RHO-201ENST00000296271 IGKV3OR2-268A0A0C4DH90 116 aa8.34□□□□□ -1.07
RHO-201ENST00000296271 G3V4G9 280 aa8.34□□□□□ -1.07
RHO-201ENST00000296271 LINC00242Q5T6M2 205 aa8.34□□□□□ -1.07
RHO-201ENST00000296271 DEFB4AO15263 64 aa8.33□□□□□ -1.08
RHO-201ENST00000296271 TMEM101Q96IK0 257 aa8.33□□□□□ -1.08
RHO-201ENST00000296271 CRLF1O75462 422 aa8.33□□□□□ -1.08
RHO-201ENST00000296271 TCL1BO95988 128 aa8.33□□□□□ -1.08
RHO-201ENST00000296271 DAZ2Q13117 558 aaKnown RBP8.33□□□□□ -1.08
RHO-201ENST00000296271 C16orf74Q96GX8 76 aa8.32□□□□□ -1.08
RHO-201ENST00000296271 SBSPONQ8IVN8 264 aa8.32□□□□□ -1.08
RHO-201ENST00000296271 PRO1854Q9UHT4 67 aa8.32□□□□□ -1.08
RHO-201ENST00000296271 TRGV4A0A0C4DH28 118 aa8.31□□□□□ -1.08
RHO-201ENST00000296271 GAGE6Q13070 117 aa8.31□□□□□ -1.08
RHO-201ENST00000296271 F8P00451 2351 aa8.3□□□□□ -1.08
RHO-201ENST00000296271 A0A096LPF7 62 aa8.3□□□□□ -1.08
RHO-201ENST00000296271 FHL2Q14192 279 aa8.3□□□□□ -1.08
RHO-201ENST00000296271 CDC42SE2Q9NRR3 84 aa8.3□□□□□ -1.08
RHO-201ENST00000296271 PKD1L1Q8TDX9 2849 aa8.3□□□□□ -1.08
RHO-201ENST00000296271 IGHV3-33P01772 117 aa8.3□□□□□ -1.08
RHO-201ENST00000296271 CRYBA4P53673 196 aa8.3□□□□□ -1.08
RHO-201ENST00000296271 IGLV4-60A0A075B6I1 120 aa8.29□□□□□ -1.08
RHO-201ENST00000296271 TMEM238C9JI98 176 aa8.29□□□□□ -1.08
RHO-201ENST00000296271 F8W1H4 67 aa8.29□□□□□ -1.08
RHO-201ENST00000296271 TRBV10-1A0A0K0K1A3 114 aa8.29□□□□□ -1.08
RHO-201ENST00000296271 SCGB1C2P0DMR2 95 aa8.29□□□□□ -1.08
RHO-201ENST00000296271 DAZ4Q86SG3 579 aaKnown RBP8.29□□□□□ -1.08
RHO-201ENST00000296271 DAZ3Q9NR90 486 aaKnown RBP8.29□□□□□ -1.08
RHO-201ENST00000296271 ZFAND6Q6FIF0 208 aa8.28□□□□□ -1.08
RHO-201ENST00000296271 OVOL2Q9BRP0 275 aa8.28□□□□□ -1.08
RHO-201ENST00000296271 Q9H8V8 135 aa8.28□□□□□ -1.08
RHO-201ENST00000296271 SMIM1B2RUZ4 78 aa8.28□□□□□ -1.08
RHO-201ENST00000296271 IGLV5-45A0A087WSX0 123 aa8.27□□□□□ -1.08
RHO-201ENST00000296271 FAM110AQ9BQ89 295 aa8.27□□□□□ -1.08
RHO-201ENST00000296271 C1QTNF4Q9BXJ3 329 aa8.27□□□□□ -1.08
RHO-201ENST00000296271 STAB1Q9NY15 2570 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms