RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 ODF3BA8MYP8 253 aa10.08□□□□□ -0.8
HPS3-201ENST00000296051 FSTL3O95633 263 aa10.07□□□□□ -0.8
HPS3-201ENST00000296051 C20orf203Q8NBC4 194 aa10.07□□□□□ -0.8
HPS3-201ENST00000296051 TRBV10-2A0A0K0K1G8 114 aa10.06□□□□□ -0.8
HPS3-201ENST00000296051 SOCS3O14543 225 aa10.06□□□□□ -0.8
HPS3-201ENST00000296051 SLC25A29Q8N8R3 303 aa10.06□□□□□ -0.8
HPS3-201ENST00000296051 ZFAND3Q9H8U3 227 aa10.06□□□□□ -0.8
HPS3-201ENST00000296051 IL17DQ8TAD2 202 aa10.06□□□□□ -0.8
HPS3-201ENST00000296051 ZFAND2AQ8N6M9 145 aa10.06□□□□□ -0.8
HPS3-201ENST00000296051 LGALS9O00182 355 aa10.05□□□□□ -0.8
HPS3-201ENST00000296051 HILS1P60008 231 aa10.05□□□□□ -0.8
HPS3-201ENST00000296051 HAMPP81172 84 aa10.05□□□□□ -0.8
HPS3-201ENST00000296051 CFAP126Q5VTH2 177 aa10.05□□□□□ -0.8
HPS3-201ENST00000296051 OXLD1Q5BKU9 147 aa10.05□□□□□ -0.8
HPS3-201ENST00000296051 A0A0J9YXY3 114 aa10.05□□□□□ -0.8
HPS3-201ENST00000296051 NDUFV3P56181 108 aaKnown RBP10.05□□□□□ -0.8
HPS3-201ENST00000296051 MAP6D1Q9H9H5 199 aa10.05□□□□□ -0.8
HPS3-201ENST00000296051 KLK12Q9UKR0 248 aa10.05□□□□□ -0.8
HPS3-201ENST00000296051 TRBV7-3A0A075B6L6 115 aa10.04□□□□□ -0.8
HPS3-201ENST00000296051 HERV-K104P63124 156 aa10.04□□□□□ -0.8
HPS3-201ENST00000296051 DNAJC30Q96LL9 226 aa10.04□□□□□ -0.8
HPS3-201ENST00000296051 HERVK_113P63121 156 aa10.04□□□□□ -0.8
HPS3-201ENST00000296051 RNF152Q8N8N0 203 aa10.04□□□□□ -0.8
HPS3-201ENST00000296051 LY6LH3BQJ8 138 aa10.04□□□□□ -0.8
HPS3-201ENST00000296051 TRAV4A0A0B4J268 109 aa10.04□□□□□ -0.8
HPS3-201ENST00000296051 AVPP01185 164 aa10.04□□□□□ -0.8
HPS3-201ENST00000296051 CAMK2N2Q96S95 79 aa10.04□□□□□ -0.8
HPS3-201ENST00000296051 ASPMQ8IZT6 3477 aa10.03□□□□□ -0.8
HPS3-201ENST00000296051 PRM2P04554 102 aa10.03□□□□□ -0.8
HPS3-201ENST00000296051 PROK1P58294 105 aa10.03□□□□□ -0.8
HPS3-201ENST00000296051 RPL18AQ02543 176 aaKnown RBP10.02□□□□□ -0.8
HPS3-201ENST00000296051 DEFB114Q30KQ6 69 aa10.02□□□□□ -0.8
HPS3-201ENST00000296051 A0A0J9YX75 114 aa10.02□□□□□ -0.81
HPS3-201ENST00000296051 A0A1W2PPR1 153 aa10.02□□□□□ -0.81
HPS3-201ENST00000296051 MRPS12O15235 138 aaKnown RBP10.02□□□□□ -0.81
HPS3-201ENST00000296051 NFE4Q86UQ8 179 aa10.02□□□□□ -0.81
HPS3-201ENST00000296051 LOC400499M0QZD8 3231 aa10.02□□□□□ -0.81
HPS3-201ENST00000296051 TRIAP1O43715 76 aa10.02□□□□□ -0.81
HPS3-201ENST00000296051 ZNF22P17026 224 aaPredicted RBP10.02□□□□□ -0.81
HPS3-201ENST00000296051 K7EQD1 137 aa10.01□□□□□ -0.81
HPS3-201ENST00000296051 SPATA25Q9BR10 227 aa10.01□□□□□ -0.81
HPS3-201ENST00000296051 FAM222AQ5U5X8 452 aa10.01□□□□□ -0.81
HPS3-201ENST00000296051 VSIG2Q96IQ7 327 aa10.01□□□□□ -0.81
HPS3-201ENST00000296051 MAP1AP78559 2803 aaPredicted RBP10.01□□□□□ -0.81
HPS3-201ENST00000296051 CDKN2A-AS1Q9UH64 79 aa10.01□□□□□ -0.81
HPS3-201ENST00000296051 IGHV1-58A0A0C4DH39 117 aa10□□□□□ -0.81
HPS3-201ENST00000296051 PRO0255Q9UI72 69 aa10□□□□□ -0.81
HPS3-201ENST00000296051 DMDP11532 3685 aa10□□□□□ -0.81
HPS3-201ENST00000296051 COL5A1P20908 1838 aaPredicted RBP10□□□□□ -0.81
HPS3-201ENST00000296051 SND1-IT1Q9HBX3 110 aa10□□□□□ -0.81
HPS3-201ENST00000296051 ADAMTS20P59510 1910 aa10□□□□□ -0.81
HPS3-201ENST00000296051 CRIP2P52943 208 aaPredicted RBP10□□□□□ -0.81
HPS3-201ENST00000296051 SPANXA1Q9NS26 97 aa10□□□□□ -0.81
HPS3-201ENST00000296051 DEFB131BA0A096LNP1 70 aa10□□□□□ -0.81
HPS3-201ENST00000296051 TRACP01848 142 aa10□□□□□ -0.81
HPS3-201ENST00000296051 RNASE3P12724 160 aaKnown RBP10□□□□□ -0.81
HPS3-201ENST00000296051 DSPP15924 2871 aaKnown RBP10□□□□□ -0.81
HPS3-201ENST00000296051 TRAV13-2A0A0B4J235 113 aa9.99□□□□□ -0.81
HPS3-201ENST00000296051 A0A1B0GX51 115 aa9.99□□□□□ -0.81
HPS3-201ENST00000296051 OVOL2Q9BRP0 275 aa9.98□□□□□ -0.81
HPS3-201ENST00000296051 CCDC179H3BU77 68 aa9.98□□□□□ -0.81
HPS3-201ENST00000296051 IGLV4-3A0A075B6K6 122 aa9.98□□□□□ -0.81
HPS3-201ENST00000296051 H3BT86 120 aa9.98□□□□□ -0.81
HPS3-201ENST00000296051 RPL32P62910 135 aaKnown RBP9.98□□□□□ -0.81
HPS3-201ENST00000296051 HELZ2Q9BYK8 2649 aaKnown RBP9.98□□□□□ -0.81
HPS3-201ENST00000296051 TMEM263Q8WUH6 116 aaKnown RBP9.97□□□□□ -0.81
HPS3-201ENST00000296051 MGAQ8IWI9 3026 aa9.97□□□□□ -0.81
HPS3-201ENST00000296051 Q6ZTI0 123 aa9.97□□□□□ -0.81
HPS3-201ENST00000296051 IGHV4-4A0A075B6R2 117 aa9.97□□□□□ -0.81
HPS3-201ENST00000296051 LECT2O14960 151 aa9.97□□□□□ -0.81
HPS3-201ENST00000296051 C18orf65Q6ZTR6 163 aa9.96□□□□□ -0.81
HPS3-201ENST00000296051 UBL5Q9BZL1 73 aa9.96□□□□□ -0.81
HPS3-201ENST00000296051 MED14OSP0DP75 135 aa9.96□□□□□ -0.82
HPS3-201ENST00000296051 CNFNQ9BYD5 112 aa9.96□□□□□ -0.82
HPS3-201ENST00000296051 ZNF702PQ9H963 129 aa9.96□□□□□ -0.82
HPS3-201ENST00000296051 COX7A2LO14548 114 aa9.96□□□□□ -0.82
HPS3-201ENST00000296051 MRGPRG-AS1Q2M3A8 158 aa9.96□□□□□ -0.82
HPS3-201ENST00000296051 MIR7-3HGQ8N6C7 128 aa9.96□□□□□ -0.82
HPS3-201ENST00000296051 TMEM223A0PJW6 202 aa9.95□□□□□ -0.82
HPS3-201ENST00000296051 WFDC10AQ9H1F0 79 aa9.95□□□□□ -0.82
HPS3-201ENST00000296051 ZNF580Q9UK33 172 aa9.95□□□□□ -0.82
HPS3-201ENST00000296051 DAZ2Q13117 558 aaKnown RBP9.95□□□□□ -0.82
HPS3-201ENST00000296051 MIAQ16674 131 aa9.95□□□□□ -0.82
HPS3-201ENST00000296051 DAZ4Q86SG3 579 aaKnown RBP9.95□□□□□ -0.82
HPS3-201ENST00000296051 DAZ3Q9NR90 486 aaKnown RBP9.95□□□□□ -0.82
HPS3-201ENST00000296051 A0A0B4J2C4 111 aa9.95□□□□□ -0.82
HPS3-201ENST00000296051 M0QY20 66 aa9.95□□□□□ -0.82
HPS3-201ENST00000296051 PSMG3-AS1Q96PY0 264 aa9.95□□□□□ -0.82
HPS3-201ENST00000296051 C14orf132Q9NPU4 83 aa9.95□□□□□ -0.82
HPS3-201ENST00000296051 PIK3CD-AS1Q5SR53 167 aa9.94□□□□□ -0.82
HPS3-201ENST00000296051 LINC00467Q9BRT7 94 aa9.94□□□□□ -0.82
HPS3-201ENST00000296051 IGLV2-18A0A075B6J9 118 aa9.94□□□□□ -0.82
HPS3-201ENST00000296051 K7EQG2 157 aa9.94□□□□□ -0.82
HPS3-201ENST00000296051 EDN2P20800 178 aa9.94□□□□□ -0.82
HPS3-201ENST00000296051 TSPEAR-AS2P59090 65 aa9.94□□□□□ -0.82
HPS3-201ENST00000296051 EBI3Q14213 229 aa9.94□□□□□ -0.82
HPS3-201ENST00000296051 IGKV2-24A0A0C4DH68 120 aa9.94□□□□□ -0.82
HPS3-201ENST00000296051 TIRAPP58753 221 aa9.94□□□□□ -0.82
HPS3-201ENST00000296051 DEFB105AQ8NG35 78 aa9.93□□□□□ -0.82
HPS3-201ENST00000296051 POLR2KP53803 58 aaKnown RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms