RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 DAZ2Q13117 558 aaKnown RBP12.05□□□□□ -0.48
CPSF4-201ENST00000292476 ZNF22P17026 224 aaPredicted RBP12.04□□□□□ -0.48
CPSF4-201ENST00000292476 AZU1P20160 251 aa12.04□□□□□ -0.48
CPSF4-201ENST00000292476 EGFEM1PQ0D2K5 195 aa12.04□□□□□ -0.48
CPSF4-201ENST00000292476 IL17DQ8TAD2 202 aa12.04□□□□□ -0.48
CPSF4-201ENST00000292476 SPANXA1Q9NS26 97 aa12.04□□□□□ -0.48
CPSF4-201ENST00000292476 IGHV3-30P01768 117 aa12.03□□□□□ -0.48
CPSF4-201ENST00000292476 PRB2P02812 416 aaPredicted RBP12.03□□□□□ -0.48
CPSF4-201ENST00000292476 IGHV3-30-5P0DP03 117 aa12.03□□□□□ -0.48
CPSF4-201ENST00000292476 CFAP126Q5VTH2 177 aa12.03□□□□□ -0.48
CPSF4-201ENST00000292476 PGPEP1Q9NXJ5 209 aa12.03□□□□□ -0.48
CPSF4-201ENST00000292476 CIDEAO60543 219 aa12.03□□□□□ -0.48
CPSF4-201ENST00000292476 IGHV3-53P01767 116 aa12.03□□□□□ -0.48
CPSF4-201ENST00000292476 MRPS36P82909 103 aaKnown RBP12.03□□□□□ -0.48
CPSF4-201ENST00000292476 MRPL16Q9NX20 251 aaKnown RBP12.03□□□□□ -0.48
CPSF4-201ENST00000292476 PRM2P04554 102 aa12.02□□□□□ -0.49
CPSF4-201ENST00000292476 RS1O15537 224 aa12.01□□□□□ -0.49
CPSF4-201ENST00000292476 KPRPQ5T749 579 aaPredicted RBP12.01□□□□□ -0.49
CPSF4-201ENST00000292476 DEFB104AQ8WTQ1 72 aa12.01□□□□□ -0.49
CPSF4-201ENST00000292476 OPRPNQ99935 248 aaPredicted RBP12.01□□□□□ -0.49
CPSF4-201ENST00000292476 GAGE13Q4V321 117 aa12□□□□□ -0.49
CPSF4-201ENST00000292476 OVOL2Q9BRP0 275 aa12□□□□□ -0.49
CPSF4-201ENST00000292476 TRGV1A0A0A0MS02 117 aa12□□□□□ -0.49
CPSF4-201ENST00000292476 IGHV4-30-4P0DP06 118 aa12□□□□□ -0.49
CPSF4-201ENST00000292476 UBE2D3P61077 147 aa12□□□□□ -0.49
CPSF4-201ENST00000292476 UBE2D2P62837 147 aa12□□□□□ -0.49
CPSF4-201ENST00000292476 PRO0461Q9UI25 63 aa12□□□□□ -0.49
CPSF4-201ENST00000292476 A0A0J9YXV3 536 aa11.99□□□□□ -0.49
CPSF4-201ENST00000292476 A8MZ25 164 aa11.99□□□□□ -0.49
CPSF4-201ENST00000292476 H3BMG7 143 aa11.99□□□□□ -0.49
CPSF4-201ENST00000292476 J3QR89 54 aa11.99□□□□□ -0.49
CPSF4-201ENST00000292476 TSPAN13O95857 204 aa11.99□□□□□ -0.49
CPSF4-201ENST00000292476 CHCHD7Q9BUK0 85 aa11.99□□□□□ -0.49
CPSF4-201ENST00000292476 TMEM238C9JI98 176 aa11.98□□□□□ -0.49
CPSF4-201ENST00000292476 RPL24P83731 157 aaKnown RBP11.98□□□□□ -0.49
CPSF4-201ENST00000292476 FAM104AQ969W3 186 aa11.98□□□□□ -0.49
CPSF4-201ENST00000292476 NOP10Q9NPE3 64 aaKnown RBP11.98□□□□□ -0.49
CPSF4-201ENST00000292476 IGHV3-73A0A0B4J1V6 119 aa11.97□□□□□ -0.49
CPSF4-201ENST00000292476 TEX48A0A1B0GUV7 120 aa11.97□□□□□ -0.49
CPSF4-201ENST00000292476 TINCRA0A1B0GVN0 87 aa11.97□□□□□ -0.49
CPSF4-201ENST00000292476 TIMM21Q9BVV7 248 aa11.97□□□□□ -0.49
CPSF4-201ENST00000292476 TRAV4A0A0B4J268 109 aa11.97□□□□□ -0.49
CPSF4-201ENST00000292476 KRTAP10-11P60412 298 aa11.97□□□□□ -0.49
CPSF4-201ENST00000292476 C10orf126Q8N4M7 172 aa11.97□□□□□ -0.49
CPSF4-201ENST00000292476 UBE2D4Q9Y2X8 147 aa11.97□□□□□ -0.49
CPSF4-201ENST00000292476 TRBV20-1A0A075B6N2 111 aa11.96□□□□□ -0.5
CPSF4-201ENST00000292476 PLAC8L1A1L4L8 177 aa11.96□□□□□ -0.5
CPSF4-201ENST00000292476 CFC1BP0CG36 223 aa11.96□□□□□ -0.5
CPSF4-201ENST00000292476 CFC1P0CG37 223 aa11.96□□□□□ -0.5
CPSF4-201ENST00000292476 COTL1Q14019 142 aa11.96□□□□□ -0.5
CPSF4-201ENST00000292476 WFDC2Q14508 124 aa11.96□□□□□ -0.5
CPSF4-201ENST00000292476 A0A0B4J2C4 111 aa11.95□□□□□ -0.5
CPSF4-201ENST00000292476 Q6ZSN1 163 aa11.95□□□□□ -0.5
CPSF4-201ENST00000292476 ATP6V0E2Q8NHE4 81 aa11.95□□□□□ -0.5
CPSF4-201ENST00000292476 TRGV2A0A075B6R0 118 aa11.94□□□□□ -0.5
CPSF4-201ENST00000292476 APOMO95445 188 aa11.94□□□□□ -0.5
CPSF4-201ENST00000292476 Q6ZTI0 123 aa11.94□□□□□ -0.5
CPSF4-201ENST00000292476 PRO1854Q9UHT4 67 aa11.94□□□□□ -0.5
CPSF4-201ENST00000292476 X6R8D5 127 aa11.94□□□□□ -0.5
CPSF4-201ENST00000292476 DNAH3Q8TD57 4116 aa11.94□□□□□ -0.5
CPSF4-201ENST00000292476 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.94□□□□□ -0.5
CPSF4-201ENST00000292476 IGHV1-58A0A0C4DH39 117 aa11.94□□□□□ -0.5
CPSF4-201ENST00000292476 IGHV3-30-3P0DP02 117 aa11.94□□□□□ -0.5
CPSF4-201ENST00000292476 MIFP14174 115 aa11.94□□□□□ -0.5
CPSF4-201ENST00000292476 NACAE9PAV3 2078 aa11.93□□□□□ -0.5
CPSF4-201ENST00000292476 TRBV10-1A0A0K0K1A3 114 aa11.93□□□□□ -0.5
CPSF4-201ENST00000292476 DEFB135Q30KP9 77 aa11.93□□□□□ -0.5
CPSF4-201ENST00000292476 RNF183Q96D59 192 aa11.93□□□□□ -0.5
CPSF4-201ENST00000292476 PRKDCP78527 4128 aaKnown RBP11.92□□□□□ -0.5
CPSF4-201ENST00000292476 A0A0J9YXY3 114 aa11.92□□□□□ -0.5
CPSF4-201ENST00000292476 LYRM9A8MSI8 78 aa11.92□□□□□ -0.5
CPSF4-201ENST00000292476 C21orf62-AS1Q17RA5 79 aa11.92□□□□□ -0.5
CPSF4-201ENST00000292476 TIRAPP58753 221 aa11.91□□□□□ -0.5
CPSF4-201ENST00000292476 MRAPQ8TCY5 172 aa11.91□□□□□ -0.5
CPSF4-201ENST00000292476 SPANXDQ9BXN6 97 aa11.91□□□□□ -0.5
CPSF4-201ENST00000292476 SPANXCQ9NY87 97 aa11.91□□□□□ -0.5
CPSF4-201ENST00000292476 IGLV5-45A0A087WSX0 123 aa11.91□□□□□ -0.5
CPSF4-201ENST00000292476 LOC107984156A0A0G2JMH3 177 aa11.91□□□□□ -0.5
CPSF4-201ENST00000292476 GAGE7O76087 117 aa11.91□□□□□ -0.5
CPSF4-201ENST00000292476 GAGE12FP0CL80 117 aa11.91□□□□□ -0.5
CPSF4-201ENST00000292476 GAGE12GP0CL81 117 aa11.91□□□□□ -0.5
CPSF4-201ENST00000292476 GAGE12IP0CL82 117 aa11.91□□□□□ -0.5
CPSF4-201ENST00000292476 SMAGPQ0VAQ4 97 aa11.91□□□□□ -0.5
CPSF4-201ENST00000292476 ARL17AQ8IVW1 177 aa11.91□□□□□ -0.5
CPSF4-201ENST00000292476 VSIG2Q96IQ7 327 aa11.91□□□□□ -0.5
CPSF4-201ENST00000292476 A4D1N5 150 aa11.9□□□□□ -0.5
CPSF4-201ENST00000292476 ETDBQ3ZM63 59 aa11.9□□□□□ -0.5
CPSF4-201ENST00000292476 K7EIL1 84 aa11.89□□□□□ -0.51
CPSF4-201ENST00000292476 TIMM17BO60830 172 aa11.89□□□□□ -0.51
CPSF4-201ENST00000292476 Q6ZUT4 128 aa11.89□□□□□ -0.51
CPSF4-201ENST00000292476 FAM19A3Q7Z5A8 133 aa11.89□□□□□ -0.51
CPSF4-201ENST00000292476 LINC00612Q8N6U2 182 aa11.89□□□□□ -0.51
CPSF4-201ENST00000292476 CSDC2Q9Y534 153 aaKnown RBP11.89□□□□□ -0.51
CPSF4-201ENST00000292476 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.88□□□□□ -0.51
CPSF4-201ENST00000292476 IGKV2-29A2NJV5 120 aaPredicted RBP11.88□□□□□ -0.51
CPSF4-201ENST00000292476 M0QXV9 152 aa11.88□□□□□ -0.51
CPSF4-201ENST00000292476 IGHV3-33P01772 117 aa11.88□□□□□ -0.51
CPSF4-201ENST00000292476 PSMB2P49721 201 aa11.88□□□□□ -0.51
CPSF4-201ENST00000292476 CEMP1Q6PRD7 247 aaPredicted RBP11.88□□□□□ -0.51
CPSF4-201ENST00000292476 SBSPONQ8IVN8 264 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms