RNA–Protein interactions for RNA: ENST00000285398.6

ERCC3-201, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC3, Length 2,750 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-201ENST00000285398 LST1O00453 97 aa7.78□□□□□ -1.16
ERCC3-201ENST00000285398 RHOHQ15669 191 aa7.78□□□□□ -1.16
ERCC3-201ENST00000285398 C10orf99Q6UWK7 81 aa7.78□□□□□ -1.16
ERCC3-201ENST00000285398 DNAJC30Q96LL9 226 aa7.78□□□□□ -1.16
ERCC3-201ENST00000285398 NSUN5P1Q3KNT7 163 aa7.77□□□□□ -1.16
ERCC3-201ENST00000285398 APRG1Q8IVJ8 170 aa7.77□□□□□ -1.16
ERCC3-201ENST00000285398 INAFM1C9JVW0 142 aa7.77□□□□□ -1.17
ERCC3-201ENST00000285398 Q6YL49 198 aa7.77□□□□□ -1.17
ERCC3-201ENST00000285398 FAM19A4Q96LR4 140 aa7.77□□□□□ -1.17
ERCC3-201ENST00000285398 ZNF256Q9Y2P7 627 aaPredicted RBP7.77□□□□□ -1.17
ERCC3-201ENST00000285398 C9orf153Q5TBE3 101 aa7.76□□□□□ -1.17
ERCC3-201ENST00000285398 C3orf56Q8N813 242 aa7.76□□□□□ -1.17
ERCC3-201ENST00000285398 ESM1Q9NQ30 184 aa7.76□□□□□ -1.17
ERCC3-201ENST00000285398 C3orf22Q8N5N4 141 aa7.76□□□□□ -1.17
ERCC3-201ENST00000285398 OPRPNQ99935 248 aaPredicted RBP7.76□□□□□ -1.17
ERCC3-201ENST00000285398 SPANXCQ9NY87 97 aa7.76□□□□□ -1.17
ERCC3-201ENST00000285398 A0A087WWL8 130 aa7.76□□□□□ -1.17
ERCC3-201ENST00000285398 UQCRQO14949 82 aa7.76□□□□□ -1.17
ERCC3-201ENST00000285398 NDUFA7O95182 113 aa7.76□□□□□ -1.17
ERCC3-201ENST00000285398 ATP5G1P05496 136 aa7.76□□□□□ -1.17
ERCC3-201ENST00000285398 IGHV3-30-3P0DP02 117 aa7.76□□□□□ -1.17
ERCC3-201ENST00000285398 LITAFQ99732 161 aa7.76□□□□□ -1.17
ERCC3-201ENST00000285398 TIMM21Q9BVV7 248 aa7.76□□□□□ -1.17
ERCC3-201ENST00000285398 A0A0J9YXV3 536 aa7.75□□□□□ -1.17
ERCC3-201ENST00000285398 SOCS3O14543 225 aa7.75□□□□□ -1.17
ERCC3-201ENST00000285398 CLEC2BQ92478 149 aa7.75□□□□□ -1.17
ERCC3-201ENST00000285398 LINC00694P0DN24 101 aa7.75□□□□□ -1.17
ERCC3-201ENST00000285398 JPT2Q9H910 190 aa7.75□□□□□ -1.17
ERCC3-201ENST00000285398 MIAQ16674 131 aa7.74□□□□□ -1.17
ERCC3-201ENST00000285398 I3L3M4 83 aa7.74□□□□□ -1.17
ERCC3-201ENST00000285398 LINC00643Q86TS7 51 aa7.74□□□□□ -1.17
ERCC3-201ENST00000285398 C20orf203Q8NBC4 194 aa7.74□□□□□ -1.17
ERCC3-201ENST00000285398 VWFP04275 2813 aa7.74□□□□□ -1.17
ERCC3-201ENST00000285398 MUC4Q99102 2169 aa7.74□□□□□ -1.17
ERCC3-201ENST00000285398 TRAV8-3A0A0A6YYJ7 113 aa7.73□□□□□ -1.17
ERCC3-201ENST00000285398 TRAV41A0A0B4J266 112 aa7.73□□□□□ -1.17
ERCC3-201ENST00000285398 SMIM9A6NGZ8 99 aa7.73□□□□□ -1.17
ERCC3-201ENST00000285398 DNAJC9-AS1A6NH13 148 aa7.73□□□□□ -1.17
ERCC3-201ENST00000285398 FAM74A4Q5TZK3 123 aa7.73□□□□□ -1.17
ERCC3-201ENST00000285398 NOTCH3Q9UM47 2321 aa7.73□□□□□ -1.17
ERCC3-201ENST00000285398 IGLV4-3A0A075B6K6 122 aa7.73□□□□□ -1.17
ERCC3-201ENST00000285398 ADARB2-AS1A8MUL3 147 aa7.73□□□□□ -1.17
ERCC3-201ENST00000285398 DEFB1P60022 68 aa7.73□□□□□ -1.17
ERCC3-201ENST00000285398 TMEM61Q8N0U2 210 aa7.73□□□□□ -1.17
ERCC3-201ENST00000285398 LINC00526Q96FQ7 95 aa7.73□□□□□ -1.17
ERCC3-201ENST00000285398 ZNF580Q9UK33 172 aa7.73□□□□□ -1.17
ERCC3-201ENST00000285398 ZNF561-AS1K7EIQ3 104 aa7.72□□□□□ -1.17
ERCC3-201ENST00000285398 IGHV3-11P01762 117 aa7.72□□□□□ -1.17
ERCC3-201ENST00000285398 IGHG2P01859 326 aa7.72□□□□□ -1.17
ERCC3-201ENST00000285398 ADAMTSL4-AS1Q5T5F5 129 aa7.72□□□□□ -1.17
ERCC3-201ENST00000285398 NDUFA12Q9UI09 145 aa7.72□□□□□ -1.17
ERCC3-201ENST00000285398 IGHV1-58A0A0C4DH39 117 aa7.72□□□□□ -1.17
ERCC3-201ENST00000285398 M0QY20 66 aa7.72□□□□□ -1.17
ERCC3-201ENST00000285398 RPL11P62913 178 aaKnown RBP7.72□□□□□ -1.17
ERCC3-201ENST00000285398 F6UB75 175 aa7.71□□□□□ -1.17
ERCC3-201ENST00000285398 J3KT08 172 aa7.71□□□□□ -1.17
ERCC3-201ENST00000285398 HERVK_113P63121 156 aa7.71□□□□□ -1.17
ERCC3-201ENST00000285398 C11orf44Q8N8P7 122 aa7.71□□□□□ -1.17
ERCC3-201ENST00000285398 TRRAPQ9Y4A5 3859 aa7.71□□□□□ -1.17
ERCC3-201ENST00000285398 A0A1B0GX51 115 aa7.71□□□□□ -1.18
ERCC3-201ENST00000285398 KLLNB2CW77 178 aa7.71□□□□□ -1.18
ERCC3-201ENST00000285398 F5H768 121 aa7.71□□□□□ -1.18
ERCC3-201ENST00000285398 MRPS36P82909 103 aaKnown RBP7.71□□□□□ -1.18
ERCC3-201ENST00000285398 FAM223BA6NKX1 122 aa7.71□□□□□ -1.18
ERCC3-201ENST00000285398 CEMP1Q6PRD7 247 aaPredicted RBP7.71□□□□□ -1.18
ERCC3-201ENST00000285398 FAM223AQ8IWN6 122 aa7.71□□□□□ -1.18
ERCC3-201ENST00000285398 ZNF702PQ9H963 129 aa7.71□□□□□ -1.18
ERCC3-201ENST00000285398 FBN1P35555 2871 aaKnown RBP7.7□□□□□ -1.18
ERCC3-201ENST00000285398 TRBV12-3P01733 135 aa7.7□□□□□ -1.18
ERCC3-201ENST00000285398 CXCL5P42830 114 aa7.7□□□□□ -1.18
ERCC3-201ENST00000285398 UNQ9165/PRO28630Q6UXU0 137 aa7.7□□□□□ -1.18
ERCC3-201ENST00000285398 DCANP1Q8TF63 244 aa7.7□□□□□ -1.18
ERCC3-201ENST00000285398 STAB1Q9NY15 2570 aa7.7□□□□□ -1.18
ERCC3-201ENST00000285398 NDUFA4O00483 81 aa7.7□□□□□ -1.18
ERCC3-201ENST00000285398 Q6ZSV7 163 aa7.7□□□□□ -1.18
ERCC3-201ENST00000285398 PYGO1Q9Y3Y4 419 aa7.7□□□□□ -1.18
ERCC3-201ENST00000285398 TIMM17BO60830 172 aa7.69□□□□□ -1.18
ERCC3-201ENST00000285398 CD28P10747 220 aa7.69□□□□□ -1.18
ERCC3-201ENST00000285398 NPC2P61916 151 aa7.69□□□□□ -1.18
ERCC3-201ENST00000285398 C19orf54Q5BKX5 351 aa7.69□□□□□ -1.18
ERCC3-201ENST00000285398 COL6A5A8TX70 2615 aa7.69□□□□□ -1.18
ERCC3-201ENST00000285398 VSIG2Q96IQ7 327 aa7.69□□□□□ -1.18
ERCC3-201ENST00000285398 LOC107984640A0A0U1RRK4 108 aa7.68□□□□□ -1.18
ERCC3-201ENST00000285398 COX7CP15954 63 aa7.68□□□□□ -1.18
ERCC3-201ENST00000285398 RPS28P62857 69 aaKnown RBP7.68□□□□□ -1.18
ERCC3-201ENST00000285398 SDIM1Q6ZPB5 146 aa7.68□□□□□ -1.18
ERCC3-201ENST00000285398 SMCR5Q8TEV8 140 aa7.68□□□□□ -1.18
ERCC3-201ENST00000285398 C9orf85Q96MD7 179 aa7.68□□□□□ -1.18
ERCC3-201ENST00000285398 TRAV12-3A0A0B4J271 114 aa7.67□□□□□ -1.18
ERCC3-201ENST00000285398 PEMTQ9UBM1 199 aa7.67□□□□□ -1.18
ERCC3-201ENST00000285398 IGKV3-7A0A075B6H7 116 aa7.67□□□□□ -1.18
ERCC3-201ENST00000285398 COX7A2LO14548 114 aa7.67□□□□□ -1.18
ERCC3-201ENST00000285398 C18orf65Q6ZTR6 163 aa7.67□□□□□ -1.18
ERCC3-201ENST00000285398 C5orf38Q86SI9 138 aa7.67□□□□□ -1.18
ERCC3-201ENST00000285398 IGHV3-16A0A0C4DH30 117 aa7.66□□□□□ -1.18
ERCC3-201ENST00000285398 TINCRA0A1B0GVN0 87 aa7.66□□□□□ -1.18
ERCC3-201ENST00000285398 RS1O15537 224 aa7.66□□□□□ -1.18
ERCC3-201ENST00000285398 CRYGAP11844 174 aa7.66□□□□□ -1.18
ERCC3-201ENST00000285398 CIRBPQ14011 172 aaKnown RBP7.66□□□□□ -1.18
ERCC3-201ENST00000285398 GAGE2AQ6NT46 116 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms