RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 IGHV3-64A0A075B6Q5 118 aa13.33□□□□□ -0.28
PDLIM3-201ENST00000284767 PYGO1Q9Y3Y4 419 aa13.33□□□□□ -0.28
PDLIM3-201ENST00000284767 INAFM1C9JVW0 142 aa13.32□□□□□ -0.28
PDLIM3-201ENST00000284767 H3BMM0 161 aa13.32□□□□□ -0.28
PDLIM3-201ENST00000284767 H7C2G1 150 aa13.32□□□□□ -0.28
PDLIM3-201ENST00000284767 Q1RN00 199 aa13.32□□□□□ -0.28
PDLIM3-201ENST00000284767 TRBV30A0A0K0K1B3 111 aa13.32□□□□□ -0.28
PDLIM3-201ENST00000284767 LINC01620Q4KN68 170 aa13.32□□□□□ -0.28
PDLIM3-201ENST00000284767 CITED1Q99966 193 aa13.32□□□□□ -0.28
PDLIM3-201ENST00000284767 C2CD3Q4AC94 2353 aa13.32□□□□□ -0.28
PDLIM3-201ENST00000284767 EDA2RQ9HAV5 297 aa13.31□□□□□ -0.28
PDLIM3-201ENST00000284767 IGHV3-30-3P0DP02 117 aa13.3□□□□□ -0.28
PDLIM3-201ENST00000284767 TIMM21Q9BVV7 248 aa13.3□□□□□ -0.28
PDLIM3-201ENST00000284767 NOTCH3Q9UM47 2321 aa13.3□□□□□ -0.28
PDLIM3-201ENST00000284767 TRGV11A0A075B6L2 103 aa13.3□□□□□ -0.28
PDLIM3-201ENST00000284767 ANAPC13Q9BS18 74 aa13.3□□□□□ -0.28
PDLIM3-201ENST00000284767 FLNBO75369 2602 aaKnown RBP13.3□□□□□ -0.28
PDLIM3-201ENST00000284767 RPL13AP40429 203 aaKnown RBP13.29□□□□□ -0.28
PDLIM3-201ENST00000284767 MRPS36P82909 103 aaKnown RBP13.29□□□□□ -0.28
PDLIM3-201ENST00000284767 RNF183Q96D59 192 aa13.29□□□□□ -0.28
PDLIM3-201ENST00000284767 NTN5Q8WTR8 489 aaPredicted RBP13.29□□□□□ -0.28
PDLIM3-201ENST00000284767 LITAFQ99732 161 aa13.29□□□□□ -0.28
PDLIM3-201ENST00000284767 ADARB2-AS1A8MUL3 147 aa13.28□□□□□ -0.28
PDLIM3-201ENST00000284767 PROK1P58294 105 aa13.28□□□□□ -0.28
PDLIM3-201ENST00000284767 KRTAP10-3P60369 221 aa13.28□□□□□ -0.28
PDLIM3-201ENST00000284767 ODF3L2Q3SX64 289 aa13.28□□□□□ -0.28
PDLIM3-201ENST00000284767 TRBV10-2A0A0K0K1G8 114 aa13.28□□□□□ -0.28
PDLIM3-201ENST00000284767 SPXQ9BT56 116 aa13.28□□□□□ -0.28
PDLIM3-201ENST00000284767 SPANXDQ9BXN6 97 aa13.27□□□□□ -0.28
PDLIM3-201ENST00000284767 SPANXCQ9NY87 97 aa13.27□□□□□ -0.28
PDLIM3-201ENST00000284767 TRIAP1O43715 76 aa13.27□□□□□ -0.29
PDLIM3-201ENST00000284767 IGHV1-58A0A0C4DH39 117 aa13.26□□□□□ -0.29
PDLIM3-201ENST00000284767 FAM104AQ969W3 186 aa13.26□□□□□ -0.29
PDLIM3-201ENST00000284767 VWFP04275 2813 aa13.26□□□□□ -0.29
PDLIM3-201ENST00000284767 TENM1Q9UKZ4 2725 aa13.26□□□□□ -0.29
PDLIM3-201ENST00000284767 SNCGO76070 127 aa13.26□□□□□ -0.29
PDLIM3-201ENST00000284767 A8MTW9 85 aa13.24□□□□□ -0.29
PDLIM3-201ENST00000284767 GAGE2BQ13066 116 aa13.24□□□□□ -0.29
PDLIM3-201ENST00000284767 GAGE2EQ4V326 116 aa13.24□□□□□ -0.29
PDLIM3-201ENST00000284767 GAGE2DQ9UEU5 116 aa13.24□□□□□ -0.29
PDLIM3-201ENST00000284767 ICOSQ9Y6W8 199 aa13.24□□□□□ -0.29
PDLIM3-201ENST00000284767 NDUFA12Q9UI09 145 aa13.24□□□□□ -0.29
PDLIM3-201ENST00000284767 NDUFA7O95182 113 aa13.23□□□□□ -0.29
PDLIM3-201ENST00000284767 PRSS2P07478 247 aa13.23□□□□□ -0.29
PDLIM3-201ENST00000284767 MIAQ16674 131 aa13.23□□□□□ -0.29
PDLIM3-201ENST00000284767 UBE2WQ96B02 151 aa13.23□□□□□ -0.29
PDLIM3-201ENST00000284767 WFDC10AQ9H1F0 79 aa13.23□□□□□ -0.29
PDLIM3-201ENST00000284767 TRAV8-3A0A0A6YYJ7 113 aa13.23□□□□□ -0.29
PDLIM3-201ENST00000284767 TRAV8-4A0A0B4J246 113 aa13.23□□□□□ -0.29
PDLIM3-201ENST00000284767 TINCRA0A1B0GVN0 87 aa13.23□□□□□ -0.29
PDLIM3-201ENST00000284767 SVIPQ8NHG7 77 aa13.23□□□□□ -0.29
PDLIM3-201ENST00000284767 COX6CP09669 75 aa13.22□□□□□ -0.29
PDLIM3-201ENST00000284767 Q6Q795 121 aa13.22□□□□□ -0.29
PDLIM3-201ENST00000284767 VSIG2Q96IQ7 327 aa13.22□□□□□ -0.29
PDLIM3-201ENST00000284767 XCL2Q9UBD3 114 aa13.22□□□□□ -0.29
PDLIM3-201ENST00000284767 TEX49A0A1B0GTD5 131 aa13.22□□□□□ -0.29
PDLIM3-201ENST00000284767 SPANXA1Q9NS26 97 aa13.22□□□□□ -0.29
PDLIM3-201ENST00000284767 TNFRSF18Q9Y5U5 241 aa13.22□□□□□ -0.29
PDLIM3-201ENST00000284767 H3BT86 120 aa13.21□□□□□ -0.29
PDLIM3-201ENST00000284767 ADAMTSL4-AS1Q5T5F5 129 aa13.21□□□□□ -0.29
PDLIM3-201ENST00000284767 GAGE5Q13069 117 aa13.21□□□□□ -0.3
PDLIM3-201ENST00000284767 GAGE6Q13070 117 aa13.21□□□□□ -0.3
PDLIM3-201ENST00000284767 C2orf82Q6UX34 121 aa13.21□□□□□ -0.3
PDLIM3-201ENST00000284767 TRAV4A0A0B4J268 109 aa13.2□□□□□ -0.3
PDLIM3-201ENST00000284767 IGHV3-73A0A0B4J1V6 119 aa13.19□□□□□ -0.3
PDLIM3-201ENST00000284767 TRAV25A0A0B4J276 109 aa13.19□□□□□ -0.3
PDLIM3-201ENST00000284767 TIMM17BO60830 172 aa13.19□□□□□ -0.3
PDLIM3-201ENST00000284767 PIK3CD-AS1Q5SR53 167 aa13.19□□□□□ -0.3
PDLIM3-201ENST00000284767 CEMP1Q6PRD7 247 aaPredicted RBP13.19□□□□□ -0.3
PDLIM3-201ENST00000284767 IGHV3OR16-12A0A075B7B8 117 aa13.19□□□□□ -0.3
PDLIM3-201ENST00000284767 H7C423 109 aa13.19□□□□□ -0.3
PDLIM3-201ENST00000284767 NHLRC4P0CG21 123 aaPredicted RBP13.19□□□□□ -0.3
PDLIM3-201ENST00000284767 NDUFV3P56181 108 aaKnown RBP13.19□□□□□ -0.3
PDLIM3-201ENST00000284767 STHQ8IWL8 128 aa13.19□□□□□ -0.3
PDLIM3-201ENST00000284767 LINC01587Q99440 93 aa13.19□□□□□ -0.3
PDLIM3-201ENST00000284767 CRLF1O75462 422 aa13.18□□□□□ -0.3
PDLIM3-201ENST00000284767 UBE2D4Q9Y2X8 147 aa13.18□□□□□ -0.3
PDLIM3-201ENST00000284767 CHCHD7Q9BUK0 85 aa13.18□□□□□ -0.3
PDLIM3-201ENST00000284767 IFITM1P13164 125 aa13.17□□□□□ -0.3
PDLIM3-201ENST00000284767 ATRQ13535 2644 aa13.17□□□□□ -0.3
PDLIM3-201ENST00000284767 SPATA3Q8NHX4 192 aa13.17□□□□□ -0.3
PDLIM3-201ENST00000284767 IGLV1-51P01701 117 aa13.16□□□□□ -0.3
PDLIM3-201ENST00000284767 MRPL23Q16540 153 aaKnown RBP13.16□□□□□ -0.3
PDLIM3-201ENST00000284767 RNASE13Q5GAN3 156 aaKnown RBP13.16□□□□□ -0.3
PDLIM3-201ENST00000284767 TTC32Q5I0X7 151 aa13.16□□□□□ -0.3
PDLIM3-201ENST00000284767 LST1O00453 97 aa13.16□□□□□ -0.3
PDLIM3-201ENST00000284767 F8P00451 2351 aa13.15□□□□□ -0.3
PDLIM3-201ENST00000284767 C15orf53Q8NAA6 179 aa13.15□□□□□ -0.3
PDLIM3-201ENST00000284767 INSP01308 110 aa13.15□□□□□ -0.3
PDLIM3-201ENST00000284767 FAM240AA0A1B0GVK7 77 aa13.14□□□□□ -0.31
PDLIM3-201ENST00000284767 DEFB121Q5J5C9 76 aa13.14□□□□□ -0.31
PDLIM3-201ENST00000284767 C1orf158Q8N1D5 194 aa13.14□□□□□ -0.31
PDLIM3-201ENST00000284767 ZNF415Q09FC8 603 aa13.13□□□□□ -0.31
PDLIM3-201ENST00000284767 C11orf72Q8NBR9 251 aa13.13□□□□□ -0.31
PDLIM3-201ENST00000284767 DNAJC30Q96LL9 226 aa13.13□□□□□ -0.31
PDLIM3-201ENST00000284767 NACAE9PAV3 2078 aa13.13□□□□□ -0.31
PDLIM3-201ENST00000284767 A8MZ25 164 aa13.13□□□□□ -0.31
PDLIM3-201ENST00000284767 Q9UF83 564 aa13.13□□□□□ -0.31
PDLIM3-201ENST00000284767 TRRAPQ9Y4A5 3859 aa13.12□□□□□ -0.31
PDLIM3-201ENST00000284767 NDUFA1O15239 70 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms