RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 FXYD2P54710 66 aa6.77□□□□□ -1.33
TRIM55-201ENST00000276573 TSPEAR-AS2P59090 65 aa6.77□□□□□ -1.33
TRIM55-201ENST00000276573 LINC00469Q8N7U9 141 aa6.77□□□□□ -1.33
TRIM55-201ENST00000276573 CSDC2Q9Y534 153 aaKnown RBP6.77□□□□□ -1.33
TRIM55-201ENST00000276573 NOTCH3Q9UM47 2321 aa6.76□□□□□ -1.33
TRIM55-201ENST00000276573 ATRQ13535 2644 aa6.76□□□□□ -1.33
TRIM55-201ENST00000276573 LYRM9A8MSI8 78 aa6.76□□□□□ -1.33
TRIM55-201ENST00000276573 FAM222AQ5U5X8 452 aa6.76□□□□□ -1.33
TRIM55-201ENST00000276573 C3orf56Q8N813 242 aa6.76□□□□□ -1.33
TRIM55-201ENST00000276573 PLEKHB2Q96CS7 222 aa6.76□□□□□ -1.33
TRIM55-201ENST00000276573 HIST1H4GQ99525 98 aa6.76□□□□□ -1.33
TRIM55-201ENST00000276573 K7EP13 123 aa6.75□□□□□ -1.33
TRIM55-201ENST00000276573 IGHV4-30-4P0DP06 118 aa6.75□□□□□ -1.33
TRIM55-201ENST00000276573 UBE2D1P51668 147 aa6.75□□□□□ -1.33
TRIM55-201ENST00000276573 SMAGPQ0VAQ4 97 aa6.75□□□□□ -1.33
TRIM55-201ENST00000276573 OXLD1Q5BKU9 147 aa6.75□□□□□ -1.33
TRIM55-201ENST00000276573 TMEM243Q9BU79 118 aa6.75□□□□□ -1.33
TRIM55-201ENST00000276573 IGHV4-28A0A0C4DH34 117 aa6.75□□□□□ -1.33
TRIM55-201ENST00000276573 SMIM13P0DJ93 91 aa6.75□□□□□ -1.33
TRIM55-201ENST00000276573 LGALS3P17931 250 aaKnown RBP6.75□□□□□ -1.33
TRIM55-201ENST00000276573 PTTG1IPP53801 180 aa6.75□□□□□ -1.33
TRIM55-201ENST00000276573 TIRAPP58753 221 aa6.75□□□□□ -1.33
TRIM55-201ENST00000276573 SHISA2Q6UWI4 295 aa6.75□□□□□ -1.33
TRIM55-201ENST00000276573 SCGB1D4Q6XE38 83 aa6.75□□□□□ -1.33
TRIM55-201ENST00000276573 H7C423 109 aa6.74□□□□□ -1.33
TRIM55-201ENST00000276573 RNF183Q96D59 192 aa6.74□□□□□ -1.33
TRIM55-201ENST00000276573 CDC42SE2Q9NRR3 84 aa6.74□□□□□ -1.33
TRIM55-201ENST00000276573 IGHV3-64A0A075B6Q5 118 aa6.73□□□□□ -1.33
TRIM55-201ENST00000276573 A0A0J9YY99 117 aa6.73□□□□□ -1.33
TRIM55-201ENST00000276573 C9orf118A6NHY6 69 aa6.73□□□□□ -1.33
TRIM55-201ENST00000276573 DEFB4AO15263 64 aa6.73□□□□□ -1.33
TRIM55-201ENST00000276573 MIFP14174 115 aa6.73□□□□□ -1.33
TRIM55-201ENST00000276573 KRTAP10-11P60412 298 aa6.73□□□□□ -1.33
TRIM55-201ENST00000276573 FAM19A3Q7Z5A8 133 aa6.73□□□□□ -1.33
TRIM55-201ENST00000276573 PRIMA1Q86XR5 153 aa6.73□□□□□ -1.33
TRIM55-201ENST00000276573 GEMIN7Q9H840 131 aaKnown RBP6.73□□□□□ -1.33
TRIM55-201ENST00000276573 TRBV6-8A0A0A6YYG3 113 aa6.73□□□□□ -1.33
TRIM55-201ENST00000276573 UBE2L6O14933 153 aa6.73□□□□□ -1.33
TRIM55-201ENST00000276573 IGHV3-30-3P0DP02 117 aa6.73□□□□□ -1.33
TRIM55-201ENST00000276573 UBE2V1Q13404 147 aa6.73□□□□□ -1.33
TRIM55-201ENST00000276573 VAMP3Q15836 100 aa6.73□□□□□ -1.33
TRIM55-201ENST00000276573 AMMECR1LQ6DCA0 310 aa6.73□□□□□ -1.33
TRIM55-201ENST00000276573 Q8NAQ8 132 aa6.73□□□□□ -1.33
TRIM55-201ENST00000276573 OR5A1Q8NGJ0 315 aa6.73□□□□□ -1.33
TRIM55-201ENST00000276573 RAB37Q96AX2 223 aa6.73□□□□□ -1.33
TRIM55-201ENST00000276573 PRO0255Q9UI72 69 aa6.73□□□□□ -1.33
TRIM55-201ENST00000276573 IGHV1-58A0A0C4DH39 117 aa6.72□□□□□ -1.33
TRIM55-201ENST00000276573 GYPEP15421 78 aa6.72□□□□□ -1.33
TRIM55-201ENST00000276573 COX6A2Q02221 97 aa6.72□□□□□ -1.33
TRIM55-201ENST00000276573 SRSF9Q13242 221 aaKnown RBP eCLIP6.72□□□□□ -1.33
TRIM55-201ENST00000276573 ATP6V0E2Q8NHE4 81 aa6.72□□□□□ -1.33
TRIM55-201ENST00000276573 TMEM101Q96IK0 257 aa6.72□□□□□ -1.33
TRIM55-201ENST00000276573 NHP2Q9NX24 153 aaKnown RBP6.72□□□□□ -1.33
TRIM55-201ENST00000276573 CDKN2A-AS1Q9UH64 79 aa6.72□□□□□ -1.33
TRIM55-201ENST00000276573 IGLV5-45A0A087WSX0 123 aa6.71□□□□□ -1.33
TRIM55-201ENST00000276573 TRAV8-3A0A0A6YYJ7 113 aa6.71□□□□□ -1.33
TRIM55-201ENST00000276573 DAD1P61803 113 aa6.71□□□□□ -1.33
TRIM55-201ENST00000276573 EGFEM1PQ0D2K5 195 aa6.71□□□□□ -1.33
TRIM55-201ENST00000276573 LINC00242Q5T6M2 205 aa6.71□□□□□ -1.33
TRIM55-201ENST00000276573 VSIG2Q96IQ7 327 aa6.71□□□□□ -1.33
TRIM55-201ENST00000276573 SPANXB1Q9NS25 103 aaPredicted RBP6.71□□□□□ -1.33
TRIM55-201ENST00000276573 CCL25O15444 150 aa6.71□□□□□ -1.34
TRIM55-201ENST00000276573 SPINK8P0C7L1 97 aa6.71□□□□□ -1.34
TRIM55-201ENST00000276573 HERVK_113P63121 156 aa6.71□□□□□ -1.34
TRIM55-201ENST00000276573 GAGE6Q13070 117 aa6.71□□□□□ -1.34
TRIM55-201ENST00000276573 C12orf74Q32Q52 190 aa6.71□□□□□ -1.34
TRIM55-201ENST00000276573 A8MZ25 164 aa6.7□□□□□ -1.34
TRIM55-201ENST00000276573 H3BUT2 72 aa6.7□□□□□ -1.34
TRIM55-201ENST00000276573 PAX4O43316 350 aa6.7□□□□□ -1.34
TRIM55-201ENST00000276573 SPART-AS1P0CW21 52 aa6.7□□□□□ -1.34
TRIM55-201ENST00000276573 CELA1Q9UNI1 258 aa6.7□□□□□ -1.34
TRIM55-201ENST00000276573 TRAV13-1A0A0B4J241 112 aa6.69□□□□□ -1.34
TRIM55-201ENST00000276573 A0A1B0GWB2 263 aa6.69□□□□□ -1.34
TRIM55-201ENST00000276573 CHCHD5Q9BSY4 110 aa6.69□□□□□ -1.34
TRIM55-201ENST00000276573 K7ERJ3 54 aa6.69□□□□□ -1.34
TRIM55-201ENST00000276573 IGHV3-30P01768 117 aa6.69□□□□□ -1.34
TRIM55-201ENST00000276573 IGHV3-30-5P0DP03 117 aa6.69□□□□□ -1.34
TRIM55-201ENST00000276573 C10orf126Q8N4M7 172 aa6.69□□□□□ -1.34
TRIM55-201ENST00000276573 NAA38Q9BRA0 125 aaKnown RBP6.69□□□□□ -1.34
TRIM55-201ENST00000276573 IGLV4-60A0A075B6I1 120 aa6.68□□□□□ -1.34
TRIM55-201ENST00000276573 A0A0J9YXY3 114 aa6.68□□□□□ -1.34
TRIM55-201ENST00000276573 ATP5G1P05496 136 aa6.68□□□□□ -1.34
TRIM55-201ENST00000276573 NDUFA12Q9UI09 145 aa6.68□□□□□ -1.34
TRIM55-201ENST00000276573 NBEAL2Q6ZNJ1 2754 aa6.68□□□□□ -1.34
TRIM55-201ENST00000276573 FBN1P35555 2871 aaKnown RBP6.68□□□□□ -1.34
TRIM55-201ENST00000276573 IGLV5-39A0A0G2JS06 123 aa6.68□□□□□ -1.34
TRIM55-201ENST00000276573 TMEM238LA0A1B0GVL6 79 aa6.68□□□□□ -1.34
TRIM55-201ENST00000276573 A6NJY4 79 aa6.68□□□□□ -1.34
TRIM55-201ENST00000276573 SAMD5Q5TGI4 173 aa6.68□□□□□ -1.34
TRIM55-201ENST00000276573 A0A1W2PPM0 123 aa6.67□□□□□ -1.34
TRIM55-201ENST00000276573 IGLL5B9A064 214 aa6.67□□□□□ -1.34
TRIM55-201ENST00000276573 ZFAND6Q6FIF0 208 aa6.67□□□□□ -1.34
TRIM55-201ENST00000276573 A0A096LPF7 62 aa6.66□□□□□ -1.34
TRIM55-201ENST00000276573 GAGE10A6NGK3 116 aa6.66□□□□□ -1.34
TRIM55-201ENST00000276573 F5H768 121 aa6.66□□□□□ -1.34
TRIM55-201ENST00000276573 A0A1B0GUV1 79 aa6.66□□□□□ -1.34
TRIM55-201ENST00000276573 SMIM1B2RUZ4 78 aa6.66□□□□□ -1.34
TRIM55-201ENST00000276573 TMEM238C9JI98 176 aa6.66□□□□□ -1.34
TRIM55-201ENST00000276573 TRAV26-1A0A087WT03 109 aa6.65□□□□□ -1.34
TRIM55-201ENST00000276573 TMEM262E9PQX1 116 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms