RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 GOLGB1Q14789 3259 aaKnown RBP6.04□□□□□ -1.44
LIMD1-201ENST00000273317 SMAD5-AS1Q9Y6J3 95 aa6.04□□□□□ -1.44
LIMD1-201ENST00000273317 REG3AQ06141 175 aa6.04□□□□□ -1.44
LIMD1-201ENST00000273317 FBXL19-AS1Q494R0 122 aa6.04□□□□□ -1.44
LIMD1-201ENST00000273317 Q8N7P7 452 aa6.04□□□□□ -1.44
LIMD1-201ENST00000273317 NANOS2P60321 138 aaKnown RBP6.04□□□□□ -1.44
LIMD1-201ENST00000273317 DHRS4-AS1Q9P1J3 65 aa6.04□□□□□ -1.44
LIMD1-201ENST00000273317 MUC22E2RYF6 1773 aaPredicted RBP6.04□□□□□ -1.44
LIMD1-201ENST00000273317 ZFP36P26651 326 aaKnown RBP6.03□□□□□ -1.44
LIMD1-201ENST00000273317 RETNQ9HD89 108 aa6.03□□□□□ -1.44
LIMD1-201ENST00000273317 USP9YO00507 2555 aaPredicted RBP6.03□□□□□ -1.44
LIMD1-201ENST00000273317 NAV2Q8IVL1 2488 aa6.03□□□□□ -1.44
LIMD1-201ENST00000273317 IGLV2-8P01709 118 aa6.03□□□□□ -1.44
LIMD1-201ENST00000273317 ESM1Q9NQ30 184 aa6.03□□□□□ -1.44
LIMD1-201ENST00000273317 SRCAPQ6ZRS2 3230 aa6.03□□□□□ -1.44
LIMD1-201ENST00000273317 MRPS36P82909 103 aaKnown RBP6.03□□□□□ -1.44
LIMD1-201ENST00000273317 WT1P19544 449 aaPredicted RBP6.03□□□□□ -1.44
LIMD1-201ENST00000273317 MUC7Q8TAX7 377 aa6.03□□□□□ -1.44
LIMD1-201ENST00000273317 TTTY13Q9BZ97 58 aa6.03□□□□□ -1.44
LIMD1-201ENST00000273317 ZNF706Q9Y5V0 76 aaPredicted RBP6.03□□□□□ -1.44
LIMD1-201ENST00000273317 PIEZO2Q9H5I5 2752 aa6.03□□□□□ -1.44
LIMD1-201ENST00000273317 SERP2Q8N6R1 65 aa6.02□□□□□ -1.45
LIMD1-201ENST00000273317 CHCHD10Q8WYQ3 142 aaPredicted RBP6.02□□□□□ -1.45
LIMD1-201ENST00000273317 LINC00308Q8TCZ7 52 aa6.02□□□□□ -1.45
LIMD1-201ENST00000273317 LINC00467Q9BRT7 94 aa6.02□□□□□ -1.45
LIMD1-201ENST00000273317 TNFRSF13BO14836 293 aaPredicted RBP6.02□□□□□ -1.45
LIMD1-201ENST00000273317 PIK3CD-AS1Q5SR53 167 aa6.02□□□□□ -1.45
LIMD1-201ENST00000273317 TRIAP1O43715 76 aa6.01□□□□□ -1.45
LIMD1-201ENST00000273317 HRCT1Q6UXD1 115 aa6.01□□□□□ -1.45
LIMD1-201ENST00000273317 C1orf195Q5TG92 126 aa6.01□□□□□ -1.45
LIMD1-201ENST00000273317 ENHOQ6UWT2 76 aa6.01□□□□□ -1.45
LIMD1-201ENST00000273317 ZNF22P17026 224 aaPredicted RBP6.01□□□□□ -1.45
LIMD1-201ENST00000273317 UNQ9165/PRO28630Q6UXU0 137 aa6.01□□□□□ -1.45
LIMD1-201ENST00000273317 PYGO1Q9Y3Y4 419 aa6.01□□□□□ -1.45
LIMD1-201ENST00000273317 ABCA12Q86UK0 2595 aa6.01□□□□□ -1.45
LIMD1-201ENST00000273317 ADORA2A-AS1P86434 159 aa6.01□□□□□ -1.45
LIMD1-201ENST00000273317 COX17Q14061 63 aa6.01□□□□□ -1.45
LIMD1-201ENST00000273317 RETNLBQ9BQ08 111 aa6.01□□□□□ -1.45
LIMD1-201ENST00000273317 DNAJC9-AS1A6NH13 148 aa6.01□□□□□ -1.45
LIMD1-201ENST00000273317 MBD6Q96DN6 1003 aa6.01□□□□□ -1.45
LIMD1-201ENST00000273317 CRYGDP07320 174 aa6.01□□□□□ -1.45
LIMD1-201ENST00000273317 FAM19A3Q7Z5A8 133 aa6.01□□□□□ -1.45
LIMD1-201ENST00000273317 GDF5OSQ5U4N7 250 aa6.01□□□□□ -1.45
LIMD1-201ENST00000273317 USP24Q9UPU5 2620 aa6.01□□□□□ -1.45
LIMD1-201ENST00000273317 C20orf197Q8N268 126 aa6.01□□□□□ -1.45
LIMD1-201ENST00000273317 POM121L12Q8N7R1 296 aa6.01□□□□□ -1.45
LIMD1-201ENST00000273317 CLUHP3Q96NS8 147 aa6□□□□□ -1.45
LIMD1-201ENST00000273317 PLA2G2AP14555 144 aa6□□□□□ -1.45
LIMD1-201ENST00000273317 LINC00269Q8N2A0 174 aa6□□□□□ -1.45
LIMD1-201ENST00000273317 CHD8Q9HCK8 2581 aa6□□□□□ -1.45
LIMD1-201ENST00000273317 WFDC10BQ8IUB3 73 aa6□□□□□ -1.45
LIMD1-201ENST00000273317 SLPIP03973 132 aa6□□□□□ -1.45
LIMD1-201ENST00000273317 IGF1P05019 195 aa6□□□□□ -1.45
LIMD1-201ENST00000273317 C11orf45Q8TAV5 145 aa6□□□□□ -1.45
LIMD1-201ENST00000273317 IGLV4-3A0A075B6K6 122 aa6□□□□□ -1.45
LIMD1-201ENST00000273317 CCDC179H3BU77 68 aa6□□□□□ -1.45
LIMD1-201ENST00000273317 DEFB4AO15263 64 aa6□□□□□ -1.45
LIMD1-201ENST00000273317 CFAP126Q5VTH2 177 aa6□□□□□ -1.45
LIMD1-201ENST00000273317 M0QY20 66 aa6□□□□□ -1.45
LIMD1-201ENST00000273317 EIF4EBP1Q13541 118 aaPredicted RBP5.99□□□□□ -1.45
LIMD1-201ENST00000273317 FASNP49327 2511 aaKnown RBP5.99□□□□□ -1.45
LIMD1-201ENST00000273317 A6NED7 52 aa5.99□□□□□ -1.45
LIMD1-201ENST00000273317 LRRC75A-AS1Q8N1F1 130 aa5.99□□□□□ -1.45
LIMD1-201ENST00000273317 K7EQG2 157 aa5.99□□□□□ -1.45
LIMD1-201ENST00000273317 A0A096LNI7 61 aa5.98□□□□□ -1.45
LIMD1-201ENST00000273317 E7EUB6 86 aa5.98□□□□□ -1.45
LIMD1-201ENST00000273317 ZNF80P51504 273 aaPredicted RBP5.98□□□□□ -1.45
LIMD1-201ENST00000273317 C20orf173Q96LM9 149 aa5.98□□□□□ -1.45
LIMD1-201ENST00000273317 CDKN2A-AS1Q9UH64 79 aa5.98□□□□□ -1.45
LIMD1-201ENST00000273317 FRMD6-AS1P0C7T7 363 aa5.98□□□□□ -1.45
LIMD1-201ENST00000273317 TRBV6-5A0A0K0K1A5 114 aa5.97□□□□□ -1.45
LIMD1-201ENST00000273317 TRBV27A0A0K0K1C4 114 aa5.97□□□□□ -1.45
LIMD1-201ENST00000273317 MIFP14174 115 aa5.97□□□□□ -1.45
LIMD1-201ENST00000273317 HILS1P60008 231 aa5.97□□□□□ -1.45
LIMD1-201ENST00000273317 Q6ZTI0 123 aa5.97□□□□□ -1.45
LIMD1-201ENST00000273317 FAM19A1Q7Z5A9 133 aa5.97□□□□□ -1.45
LIMD1-201ENST00000273317 LST1O00453 97 aa5.97□□□□□ -1.45
LIMD1-201ENST00000273317 Q6JHZ5 121 aa5.97□□□□□ -1.45
LIMD1-201ENST00000273317 TRBV6-4A0A1B0GX49 114 aa5.97□□□□□ -1.45
LIMD1-201ENST00000273317 YPEL4Q96NS1 127 aa5.97□□□□□ -1.45
LIMD1-201ENST00000273317 M0QXV9 152 aa5.97□□□□□ -1.45
LIMD1-201ENST00000273317 CEMP1Q6PRD7 247 aaPredicted RBP5.97□□□□□ -1.45
LIMD1-201ENST00000273317 RNF185Q96GF1 192 aa5.97□□□□□ -1.45
LIMD1-201ENST00000273317 TRBV6-8A0A0A6YYG3 113 aa5.96□□□□□ -1.45
LIMD1-201ENST00000273317 DEFB1P60022 68 aa5.96□□□□□ -1.45
LIMD1-201ENST00000273317 EBI3Q14213 229 aa5.96□□□□□ -1.45
LIMD1-201ENST00000273317 LINC00322Q6ZN03 302 aaPredicted RBP5.96□□□□□ -1.45
LIMD1-201ENST00000273317 CCKP06307 115 aa5.96□□□□□ -1.45
LIMD1-201ENST00000273317 CD164L2Q6UWJ8 174 aa5.96□□□□□ -1.45
LIMD1-201ENST00000273317 JMJD1CQ15652 2540 aa5.96□□□□□ -1.46
LIMD1-201ENST00000273317 CEP295Q9C0D2 2601 aa5.96□□□□□ -1.46
LIMD1-201ENST00000273317 M0R378 163 aa5.96□□□□□ -1.46
LIMD1-201ENST00000273317 DEFB114Q30KQ6 69 aa5.96□□□□□ -1.46
LIMD1-201ENST00000273317 Q6YL49 198 aa5.96□□□□□ -1.46
LIMD1-201ENST00000273317 ZFAND3Q9H8U3 227 aa5.96□□□□□ -1.46
LIMD1-201ENST00000273317 C7orf33Q8WU49 177 aa5.96□□□□□ -1.46
LIMD1-201ENST00000273317 HIGD2AQ9BW72 106 aa5.96□□□□□ -1.46
LIMD1-201ENST00000273317 A0A087WZ39 114 aa5.95□□□□□ -1.46
LIMD1-201ENST00000273317 IGLV2-11P01706 119 aa5.95□□□□□ -1.46
LIMD1-201ENST00000273317 COX7CP15954 63 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms