RNA–Protein interactions for RNA: ENST00000269217.10

LAMA3-201, Transcript of laminin subunit alpha 3, humanhuman

TSL 1 (best) BASIC

Gene LAMA3, Length 5,671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-201ENST00000269217 PRR9Q5T870 116 aa7.57□□□□□ -1.2
LAMA3-201ENST00000269217 PLXNB1O43157 2135 aa7.56□□□□□ -1.2
LAMA3-201ENST00000269217 H0Y9J4 135 aa7.56□□□□□ -1.2
LAMA3-201ENST00000269217 MIFP14174 115 aa7.56□□□□□ -1.2
LAMA3-201ENST00000269217 CEP192Q8TEP8 1941 aa7.56□□□□□ -1.2
LAMA3-201ENST00000269217 SDIM1Q6ZPB5 146 aa7.56□□□□□ -1.2
LAMA3-201ENST00000269217 POLR2KP53803 58 aaKnown RBP7.56□□□□□ -1.2
LAMA3-201ENST00000269217 ATRXP46100 2492 aa7.56□□□□□ -1.2
LAMA3-201ENST00000269217 C9orf85Q96MD7 179 aa7.56□□□□□ -1.2
LAMA3-201ENST00000269217 ZNF702PQ9H963 129 aa7.56□□□□□ -1.2
LAMA3-201ENST00000269217 C4orf48Q5BLP8 95 aa7.55□□□□□ -1.2
LAMA3-201ENST00000269217 CNFNQ9BYD5 112 aa7.55□□□□□ -1.2
LAMA3-201ENST00000269217 CSPG4Q6UVK1 2322 aa7.55□□□□□ -1.2
LAMA3-201ENST00000269217 IGKV2-24A0A0C4DH68 120 aa7.55□□□□□ -1.2
LAMA3-201ENST00000269217 SLPIP03973 132 aa7.55□□□□□ -1.2
LAMA3-201ENST00000269217 CRYGDP07320 174 aa7.55□□□□□ -1.2
LAMA3-201ENST00000269217 HIGD2AQ9BW72 106 aa7.54□□□□□ -1.2
LAMA3-201ENST00000269217 ATG2AQ2TAZ0 1938 aa7.54□□□□□ -1.2
LAMA3-201ENST00000269217 IGLV1-40P01703 118 aa7.54□□□□□ -1.2
LAMA3-201ENST00000269217 IL17DQ8TAD2 202 aa7.54□□□□□ -1.2
LAMA3-201ENST00000269217 DEFB131BA0A096LNP1 70 aa7.54□□□□□ -1.2
LAMA3-201ENST00000269217 MRPS36P82909 103 aaKnown RBP7.54□□□□□ -1.2
LAMA3-201ENST00000269217 SPATA25Q9BR10 227 aa7.54□□□□□ -1.2
LAMA3-201ENST00000269217 Q8N976 141 aa7.54□□□□□ -1.2
LAMA3-201ENST00000269217 CUL9Q8IWT3 2517 aa7.54□□□□□ -1.2
LAMA3-201ENST00000269217 UBE2D4Q9Y2X8 147 aa7.54□□□□□ -1.2
LAMA3-201ENST00000269217 TANC2Q9HCD6 1990 aa7.53□□□□□ -1.2
LAMA3-201ENST00000269217 C20orf197Q8N268 126 aa7.53□□□□□ -1.2
LAMA3-201ENST00000269217 MRPS12O15235 138 aaKnown RBP7.53□□□□□ -1.2
LAMA3-201ENST00000269217 RBX1P62877 108 aa7.53□□□□□ -1.2
LAMA3-201ENST00000269217 C6orf99Q4VX62 202 aa7.53□□□□□ -1.2
LAMA3-201ENST00000269217 DCANP1Q8TF63 244 aa7.52□□□□□ -1.2
LAMA3-201ENST00000269217 A8MZ25 164 aa7.52□□□□□ -1.21
LAMA3-201ENST00000269217 HILS1P60008 231 aa7.52□□□□□ -1.21
LAMA3-201ENST00000269217 LST1O00453 97 aa7.52□□□□□ -1.21
LAMA3-201ENST00000269217 CD164L2Q6UWJ8 174 aa7.52□□□□□ -1.21
LAMA3-201ENST00000269217 ENHOQ6UWT2 76 aa7.52□□□□□ -1.21
LAMA3-201ENST00000269217 LINC00482Q8N8I6 264 aa7.52□□□□□ -1.21
LAMA3-201ENST00000269217 GAS8-AS1O95177 125 aa7.52□□□□□ -1.21
LAMA3-201ENST00000269217 C3orf22Q8N5N4 141 aa7.52□□□□□ -1.21
LAMA3-201ENST00000269217 BBC3Q96PG8 261 aaPredicted RBP7.52□□□□□ -1.21
LAMA3-201ENST00000269217 XAGE1AQ9HD64 81 aa7.52□□□□□ -1.21
LAMA3-201ENST00000269217 FAM19A1Q7Z5A9 133 aa7.51□□□□□ -1.21
LAMA3-201ENST00000269217 OTOGLQ3ZCN5 2332 aa7.51□□□□□ -1.21
LAMA3-201ENST00000269217 UBE2D1P51668 147 aa7.51□□□□□ -1.21
LAMA3-201ENST00000269217 LINC00310P59036 64 aa7.51□□□□□ -1.21
LAMA3-201ENST00000269217 SYCNQ0VAF6 134 aa7.51□□□□□ -1.21
LAMA3-201ENST00000269217 IMUPQ9GZP8 106 aa7.5□□□□□ -1.21
LAMA3-201ENST00000269217 FAM236DA0A1B0GTK5 79 aa7.5□□□□□ -1.21
LAMA3-201ENST00000269217 FAM236CP0DP71 79 aa7.5□□□□□ -1.21
LAMA3-201ENST00000269217 NOTCH2Q04721 2471 aa7.5□□□□□ -1.21
LAMA3-201ENST00000269217 LRP4O75096 1905 aa7.5□□□□□ -1.21
LAMA3-201ENST00000269217 INAFM1C9JVW0 142 aa7.49□□□□□ -1.21
LAMA3-201ENST00000269217 Q6ZS46 218 aa7.49□□□□□ -1.21
LAMA3-201ENST00000269217 MRGPRG-AS1Q2M3A8 158 aa7.49□□□□□ -1.21
LAMA3-201ENST00000269217 LINC00959A0A1B0GUT2 108 aa7.49□□□□□ -1.21
LAMA3-201ENST00000269217 SCXQ7RTU7 201 aa7.49□□□□□ -1.21
LAMA3-201ENST00000269217 LINC01006Q8NI28 216 aa7.49□□□□□ -1.21
LAMA3-201ENST00000269217 IGIPA6NJ69 53 aa7.48□□□□□ -1.21
LAMA3-201ENST00000269217 IGKV4-1P06312 121 aa7.48□□□□□ -1.21
LAMA3-201ENST00000269217 KIR2DL5BQ8NHK3 375 aa7.48□□□□□ -1.21
LAMA3-201ENST00000269217 URB1-AS1Q96HZ7 61 aa7.48□□□□□ -1.21
LAMA3-201ENST00000269217 SORL1Q92673 2214 aa7.48□□□□□ -1.21
LAMA3-201ENST00000269217 CCKP06307 115 aa7.48□□□□□ -1.21
LAMA3-201ENST00000269217 LELP1Q5T871 98 aa7.48□□□□□ -1.21
LAMA3-201ENST00000269217 C18orf65Q6ZTR6 163 aa7.47□□□□□ -1.21
LAMA3-201ENST00000269217 LOC100131303A0A0U1RQF7 123 aa7.47□□□□□ -1.21
LAMA3-201ENST00000269217 SHISA2Q6UWI4 295 aa7.47□□□□□ -1.21
LAMA3-201ENST00000269217 FAM19A5Q7Z5A7 132 aaPredicted RBP7.47□□□□□ -1.21
LAMA3-201ENST00000269217 UBE2D3P61077 147 aa7.47□□□□□ -1.21
LAMA3-201ENST00000269217 UBE2D2P62837 147 aa7.47□□□□□ -1.21
LAMA3-201ENST00000269217 ZNF843Q8N446 348 aa7.47□□□□□ -1.21
LAMA3-201ENST00000269217 SMIM11BQ8TCY0 68 aa7.47□□□□□ -1.21
LAMA3-201ENST00000269217 M0R378 163 aa7.47□□□□□ -1.21
LAMA3-201ENST00000269217 COX17Q14061 63 aa7.47□□□□□ -1.21
LAMA3-201ENST00000269217 A0A087WZ39 114 aa7.46□□□□□ -1.21
LAMA3-201ENST00000269217 Q6ZQY7 126 aa7.46□□□□□ -1.21
LAMA3-201ENST00000269217 BRK1Q8WUW1 75 aa7.46□□□□□ -1.21
LAMA3-201ENST00000269217 MUC7Q8TAX7 377 aa7.46□□□□□ -1.22
LAMA3-201ENST00000269217 TRAV10A0A0B4J240 114 aa7.46□□□□□ -1.22
LAMA3-201ENST00000269217 CDC42SE2Q9NRR3 84 aa7.46□□□□□ -1.22
LAMA3-201ENST00000269217 WFDC10AQ9H1F0 79 aa7.46□□□□□ -1.22
LAMA3-201ENST00000269217 NAV3Q8IVL0 2385 aa7.46□□□□□ -1.22
LAMA3-201ENST00000269217 PTPN13Q12923 2485 aa7.45□□□□□ -1.22
LAMA3-201ENST00000269217 CACNA1AO00555 2505 aa7.45□□□□□ -1.22
LAMA3-201ENST00000269217 SERP2Q8N6R1 65 aa7.45□□□□□ -1.22
LAMA3-201ENST00000269217 POM121L12Q8N7R1 296 aa7.45□□□□□ -1.22
LAMA3-201ENST00000269217 A0A096LNI7 61 aa7.45□□□□□ -1.22
LAMA3-201ENST00000269217 CRIP2P52943 208 aaPredicted RBP7.45□□□□□ -1.22
LAMA3-201ENST00000269217 SEC61GP60059 68 aa7.45□□□□□ -1.22
LAMA3-201ENST00000269217 Q8IZM0 81 aa7.45□□□□□ -1.22
LAMA3-201ENST00000269217 PRM2P04554 102 aa7.45□□□□□ -1.22
LAMA3-201ENST00000269217 C1orf158Q8N1D5 194 aa7.45□□□□□ -1.22
LAMA3-201ENST00000269217 DHRS4-AS1Q9P1J3 65 aa7.45□□□□□ -1.22
LAMA3-201ENST00000269217 SONP18583 2426 aaKnown RBP7.45□□□□□ -1.22
LAMA3-201ENST00000269217 IGLV4-69A0A075B6H9 119 aa7.45□□□□□ -1.22
LAMA3-201ENST00000269217 USP17L23D6RBM5 183 aa7.44□□□□□ -1.22
LAMA3-201ENST00000269217 KPRPQ5T749 579 aaPredicted RBP7.44□□□□□ -1.22
LAMA3-201ENST00000269217 COX8CQ7Z4L0 72 aa7.44□□□□□ -1.22
LAMA3-201ENST00000269217 PTPRSQ13332 1948 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms