RNA–Protein interactions for RNA: ENST00000268099.13

SCAMP2-201, Transcript of secretory carrier membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP2, Length 2,453 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-201ENST00000268099 FAM218AQ96MZ4 157 aa11.14□□□□□ -0.63
SCAMP2-201ENST00000268099 PTPRQQ9UMZ3 2332 aa11.14□□□□□ -0.63
SCAMP2-201ENST00000268099 J3KT08 172 aa11.14□□□□□ -0.63
SCAMP2-201ENST00000268099 LRRC75A-AS1Q8N1F1 130 aa11.14□□□□□ -0.63
SCAMP2-201ENST00000268099 C2orf48Q96LS8 159 aa11.13□□□□□ -0.63
SCAMP2-201ENST00000268099 A0A1B0GX51 115 aa11.13□□□□□ -0.63
SCAMP2-201ENST00000268099 HIST1H4AP62805 103 aaKnown RBP11.13□□□□□ -0.63
SCAMP2-201ENST00000268099 DGAT2L7PQ6IED9 249 aa11.13□□□□□ -0.63
SCAMP2-201ENST00000268099 PRORYQ9H606 182 aa11.13□□□□□ -0.63
SCAMP2-201ENST00000268099 IGHV3OR16-12A0A075B7B8 117 aa11.12□□□□□ -0.63
SCAMP2-201ENST00000268099 PRM2P04554 102 aa11.12□□□□□ -0.63
SCAMP2-201ENST00000268099 CACNA1AO00555 2505 aa11.12□□□□□ -0.63
SCAMP2-201ENST00000268099 CRYGAP11844 174 aa11.12□□□□□ -0.63
SCAMP2-201ENST00000268099 LINC00242Q5T6M2 205 aa11.12□□□□□ -0.63
SCAMP2-201ENST00000268099 ATOX1O00244 68 aa11.11□□□□□ -0.63
SCAMP2-201ENST00000268099 PSMB8P28062 276 aa11.11□□□□□ -0.63
SCAMP2-201ENST00000268099 PRIMA1Q86XR5 153 aa11.11□□□□□ -0.63
SCAMP2-201ENST00000268099 SMIM1B2RUZ4 78 aa11.1□□□□□ -0.63
SCAMP2-201ENST00000268099 IGHV3-53P01767 116 aa11.1□□□□□ -0.63
SCAMP2-201ENST00000268099 MALP21145 153 aa11.1□□□□□ -0.63
SCAMP2-201ENST00000268099 PIK3CD-AS1Q5SR53 167 aa11.1□□□□□ -0.63
SCAMP2-201ENST00000268099 Q9HAA7 133 aa11.1□□□□□ -0.63
SCAMP2-201ENST00000268099 ZNF415Q09FC8 603 aa11.09□□□□□ -0.63
SCAMP2-201ENST00000268099 SYNJ2BPP57105 145 aa11.09□□□□□ -0.63
SCAMP2-201ENST00000268099 C10orf99Q6UWK7 81 aa11.09□□□□□ -0.63
SCAMP2-201ENST00000268099 FAM19A5Q7Z5A7 132 aaPredicted RBP11.09□□□□□ -0.63
SCAMP2-201ENST00000268099 COL12A1Q99715 3063 aa11.08□□□□□ -0.64
SCAMP2-201ENST00000268099 VPS13CQ709C8 3753 aa11.08□□□□□ -0.64
SCAMP2-201ENST00000268099 C5orf47Q569G3 176 aa11.08□□□□□ -0.64
SCAMP2-201ENST00000268099 HIST2H2BCQ6DN03 193 aa11.08□□□□□ -0.64
SCAMP2-201ENST00000268099 HIST2H2BDQ6DRA6 164 aa11.08□□□□□ -0.64
SCAMP2-201ENST00000268099 hADV29S1A0JD25 119 aa11.07□□□□□ -0.64
SCAMP2-201ENST00000268099 HOXD3P31249 432 aaPredicted RBP11.07□□□□□ -0.64
SCAMP2-201ENST00000268099 RPL28P46779 137 aaKnown RBP11.06□□□□□ -0.64
SCAMP2-201ENST00000268099 FAM19A3Q7Z5A8 133 aa11.06□□□□□ -0.64
SCAMP2-201ENST00000268099 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.06□□□□□ -0.642e-6■■■□□ 16.1
SCAMP2-201ENST00000268099 IGHV4-61A0A0C4DH41 118 aa11.06□□□□□ -0.64
SCAMP2-201ENST00000268099 SMIM9A6NGZ8 99 aa11.06□□□□□ -0.64
SCAMP2-201ENST00000268099 DNAL4O96015 105 aa11.06□□□□□ -0.64
SCAMP2-201ENST00000268099 RPS28P62857 69 aaKnown RBP11.06□□□□□ -0.64
SCAMP2-201ENST00000268099 TRAV13-1A0A0B4J241 112 aa11.05□□□□□ -0.64
SCAMP2-201ENST00000268099 RPL18AQ02543 176 aaKnown RBP11.05□□□□□ -0.64
SCAMP2-201ENST00000268099 PIMREGQ9BSJ6 248 aa11.05□□□□□ -0.64
SCAMP2-201ENST00000268099 TRAV13-2A0A0B4J235 113 aa11.04□□□□□ -0.64
SCAMP2-201ENST00000268099 RBMY1BA6NDE4 496 aaKnown RBP11.04□□□□□ -0.64
SCAMP2-201ENST00000268099 RBMY1EA6NEQ0 496 aaKnown RBP11.04□□□□□ -0.64
SCAMP2-201ENST00000268099 RBMY1DP0C7P1 496 aaKnown RBP11.04□□□□□ -0.64
SCAMP2-201ENST00000268099 KLRB1Q12918 225 aa11.04□□□□□ -0.64
SCAMP2-201ENST00000268099 CYSTM1Q9H1C7 97 aa11.04□□□□□ -0.64
SCAMP2-201ENST00000268099 PF4P02776 101 aa11.04□□□□□ -0.64
SCAMP2-201ENST00000268099 F5H768 121 aa11.03□□□□□ -0.64
SCAMP2-201ENST00000268099 CRPP02741 224 aa11.03□□□□□ -0.64
SCAMP2-201ENST00000268099 DEFB131AP59861 70 aa11.03□□□□□ -0.64
SCAMP2-201ENST00000268099 C11orf72Q8NBR9 251 aa11.03□□□□□ -0.64
SCAMP2-201ENST00000268099 A8MTW9 85 aa11.02□□□□□ -0.64
SCAMP2-201ENST00000268099 RS1O15537 224 aa11.02□□□□□ -0.64
SCAMP2-201ENST00000268099 ATP5J2P56134 94 aa11.02□□□□□ -0.64
SCAMP2-201ENST00000268099 OVOL2Q9BRP0 275 aa11.02□□□□□ -0.64
SCAMP2-201ENST00000268099 C14orf132Q9NPU4 83 aa11.02□□□□□ -0.64
SCAMP2-201ENST00000268099 C9orf129Q5T035 196 aaKnown RBP11.02□□□□□ -0.65
SCAMP2-201ENST00000268099 LINC00337Q8N6G1 96 aa11.02□□□□□ -0.65
SCAMP2-201ENST00000268099 IGKV3D-7A0A0C4DH55 119 aa11.01□□□□□ -0.65
SCAMP2-201ENST00000268099 Q6JHZ5 121 aa11.01□□□□□ -0.65
SCAMP2-201ENST00000268099 CRYBG3Q68DQ2 2970 aa11.01□□□□□ -0.65
SCAMP2-201ENST00000268099 ITPR1Q14643 2758 aa11.01□□□□□ -0.65
SCAMP2-201ENST00000268099 ATRXP46100 2492 aa11.01□□□□□ -0.65
SCAMP2-201ENST00000268099 A0A087WYN8 130 aa11.01□□□□□ -0.65
SCAMP2-201ENST00000268099 TMEM89A2RUT3 159 aa11.01□□□□□ -0.65
SCAMP2-201ENST00000268099 HIVEP3Q5T1R4 2406 aa11□□□□□ -0.65
SCAMP2-201ENST00000268099 SERP2Q8N6R1 65 aa11□□□□□ -0.65
SCAMP2-201ENST00000268099 OR13C6PQ8NH95 151 aa11□□□□□ -0.65
SCAMP2-201ENST00000268099 LINC00846Q9NV44 126 aa11□□□□□ -0.65
SCAMP2-201ENST00000268099 IGKV2-28A0A075B6P5 120 aa10.99□□□□□ -0.65
SCAMP2-201ENST00000268099 IGKV2D-28P01615 120 aa10.99□□□□□ -0.65
SCAMP2-201ENST00000268099 TMEM258P61165 79 aa10.99□□□□□ -0.65
SCAMP2-201ENST00000268099 OBSCN-AS1Q96MR7 158 aa10.99□□□□□ -0.65
SCAMP2-201ENST00000268099 SMIM11BQ8TCY0 68 aa10.98□□□□□ -0.65
SCAMP2-201ENST00000268099 SND1-IT1Q9HBX3 110 aa10.98□□□□□ -0.65
SCAMP2-201ENST00000268099 ACACBO00763 2458 aa10.98□□□□□ -0.65
SCAMP2-201ENST00000268099 MIR7-3HGQ8N6C7 128 aa10.98□□□□□ -0.65
SCAMP2-201ENST00000268099 Q96MF0 132 aa10.98□□□□□ -0.65
SCAMP2-201ENST00000268099 UPK3BQ9BT76 320 aa10.98□□□□□ -0.65
SCAMP2-201ENST00000268099 A0A087WVE0 104 aa10.97□□□□□ -0.65
SCAMP2-201ENST00000268099 KIR2DL5BQ8NHK3 375 aa10.97□□□□□ -0.65
SCAMP2-201ENST00000268099 CDC42SE2Q9NRR3 84 aa10.97□□□□□ -0.65
SCAMP2-201ENST00000268099 DPH3Q96FX2 82 aa10.97□□□□□ -0.65
SCAMP2-201ENST00000268099 CREBBPQ92793 2442 aa10.97□□□□□ -0.65
SCAMP2-201ENST00000268099 IGHV4-59P01825 116 aa10.96□□□□□ -0.65
SCAMP2-201ENST00000268099 NTM-AS1Q6ZSK4 140 aa10.96□□□□□ -0.65
SCAMP2-201ENST00000268099 AVPP01185 164 aa10.96□□□□□ -0.66
SCAMP2-201ENST00000268099 LINC01561Q8N1V8 128 aa10.96□□□□□ -0.66
SCAMP2-201ENST00000268099 H0YGX0 51 aa10.95□□□□□ -0.66
SCAMP2-201ENST00000268099 MSMBP08118 114 aa10.95□□□□□ -0.66
SCAMP2-201ENST00000268099 C10orf105Q8TEF2 133 aa10.95□□□□□ -0.66
SCAMP2-201ENST00000268099 USP17L23D6RBM5 183 aa10.95□□□□□ -0.66
SCAMP2-201ENST00000268099 C19orf84I3L1E1 186 aa10.95□□□□□ -0.66
SCAMP2-201ENST00000268099 INSP01308 110 aa10.94□□□□□ -0.66
SCAMP2-201ENST00000268099 RPL36AP83881 106 aaKnown RBP10.94□□□□□ -0.66
SCAMP2-201ENST00000268099 RPL36ALQ969Q0 106 aaKnown RBP10.94□□□□□ -0.66
SCAMP2-201ENST00000268099 COX7B2Q8TF08 81 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms