RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 XCL1P47992 114 aa14.61□□□□□ -0.07
CSPG5-201ENST00000264723 CRLF1O75462 422 aa14.61□□□□□ -0.07
CSPG5-201ENST00000264723 MT-ATP8P03928 68 aa14.61□□□□□ -0.07
CSPG5-201ENST00000264723 UBE2WQ96B02 151 aa14.61□□□□□ -0.07
CSPG5-201ENST00000264723 TRBV27A0A0K0K1C4 114 aa14.61□□□□□ -0.07
CSPG5-201ENST00000264723 LINC01006Q8NI28 216 aa14.6□□□□□ -0.07
CSPG5-201ENST00000264723 A0A0J9YXY3 114 aa14.6□□□□□ -0.07
CSPG5-201ENST00000264723 ANGP03950 147 aaKnown RBP14.6□□□□□ -0.07
CSPG5-201ENST00000264723 SS18Q15532 418 aa14.59□□□□□ -0.07
CSPG5-201ENST00000264723 LINC00467Q9BRT7 94 aa14.59□□□□□ -0.07
CSPG5-201ENST00000264723 TSHBP01222 138 aa14.59□□□□□ -0.07
CSPG5-201ENST00000264723 TMEM86BQ8N661 226 aa14.59□□□□□ -0.07
CSPG5-201ENST00000264723 CDKN2A-AS1Q9UH64 79 aa14.59□□□□□ -0.07
CSPG5-201ENST00000264723 IGLV10-54A0A075B6I4 117 aa14.58□□□□□ -0.07
CSPG5-201ENST00000264723 GYPEP15421 78 aa14.58□□□□□ -0.07
CSPG5-201ENST00000264723 LINC01620Q4KN68 170 aa14.58□□□□□ -0.07
CSPG5-201ENST00000264723 IGLV4-69A0A075B6H9 119 aa14.58□□□□□ -0.08
CSPG5-201ENST00000264723 NFE4Q86UQ8 179 aa14.57□□□□□ -0.08
CSPG5-201ENST00000264723 CSMD1Q96PZ7 3565 aa14.57□□□□□ -0.08
CSPG5-201ENST00000264723 RS1O15537 224 aa14.57□□□□□ -0.08
CSPG5-201ENST00000264723 IGHV3-30P01768 117 aa14.57□□□□□ -0.08
CSPG5-201ENST00000264723 IGHV3-30-5P0DP03 117 aa14.57□□□□□ -0.08
CSPG5-201ENST00000264723 K7EQD1 137 aa14.56□□□□□ -0.08
CSPG5-201ENST00000264723 PRSS47A8MTI9 375 aa14.56□□□□□ -0.08
CSPG5-201ENST00000264723 TMEM223A0PJW6 202 aa14.56□□□□□ -0.08
CSPG5-201ENST00000264723 RBMY1BA6NDE4 496 aaKnown RBP14.55□□□□□ -0.08
CSPG5-201ENST00000264723 RBMY1EA6NEQ0 496 aaKnown RBP14.55□□□□□ -0.08
CSPG5-201ENST00000264723 RBMY1DP0C7P1 496 aaKnown RBP14.55□□□□□ -0.08
CSPG5-201ENST00000264723 RBMY1A1P0DJD3 496 aaKnown RBP14.55□□□□□ -0.08
CSPG5-201ENST00000264723 RBMY1CP0DJD4 496 aa14.55□□□□□ -0.08
CSPG5-201ENST00000264723 SPANXA1Q9NS26 97 aa14.55□□□□□ -0.08
CSPG5-201ENST00000264723 IGSF10Q6WRI0 2623 aa14.55□□□□□ -0.08
CSPG5-201ENST00000264723 DPH3Q96FX2 82 aa14.55□□□□□ -0.08
CSPG5-201ENST00000264723 Q9UF83 564 aa14.55□□□□□ -0.08
CSPG5-201ENST00000264723 MUC4Q99102 2169 aa14.55□□□□□ -0.08
CSPG5-201ENST00000264723 TRAV25A0A0B4J276 109 aa14.55□□□□□ -0.08
CSPG5-201ENST00000264723 HERVK_113P63121 156 aa14.55□□□□□ -0.08
CSPG5-201ENST00000264723 TEX49A0A1B0GTD5 131 aa14.54□□□□□ -0.08
CSPG5-201ENST00000264723 LINC00482Q8N8I6 264 aa14.54□□□□□ -0.08
CSPG5-201ENST00000264723 RNF152Q8N8N0 203 aa14.54□□□□□ -0.08
CSPG5-201ENST00000264723 ICOSQ9Y6W8 199 aa14.54□□□□□ -0.08
CSPG5-201ENST00000264723 APOC4P55056 127 aa14.54□□□□□ -0.08
CSPG5-201ENST00000264723 C15orf53Q8NAA6 179 aa14.54□□□□□ -0.08
CSPG5-201ENST00000264723 IGHV1-58A0A0C4DH39 117 aa14.54□□□□□ -0.08
CSPG5-201ENST00000264723 C16orf74Q96GX8 76 aa14.54□□□□□ -0.08
CSPG5-201ENST00000264723 MRAPQ8TCY5 172 aa14.53□□□□□ -0.08
CSPG5-201ENST00000264723 S100A7L2Q5SY68 101 aa14.53□□□□□ -0.08
CSPG5-201ENST00000264723 NDUFA7O95182 113 aa14.53□□□□□ -0.08
CSPG5-201ENST00000264723 CRIP2P52943 208 aaPredicted RBP14.53□□□□□ -0.08
CSPG5-201ENST00000264723 C9orf85Q96MD7 179 aa14.53□□□□□ -0.08
CSPG5-201ENST00000264723 IGHV3-33P01772 117 aa14.52□□□□□ -0.08
CSPG5-201ENST00000264723 CFAP126Q5VTH2 177 aa14.52□□□□□ -0.08
CSPG5-201ENST00000264723 MGAM2Q2M2H8 2515 aa14.52□□□□□ -0.09
CSPG5-201ENST00000264723 GAGE2AQ6NT46 116 aa14.51□□□□□ -0.09
CSPG5-201ENST00000264723 ZNF575Q86XF7 245 aa14.51□□□□□ -0.09
CSPG5-201ENST00000264723 TMEM263Q8WUH6 116 aaKnown RBP14.51□□□□□ -0.09
CSPG5-201ENST00000264723 ODF3Q96PU9 254 aa14.51□□□□□ -0.09
CSPG5-201ENST00000264723 ATP6V0E2Q8NHE4 81 aa14.51□□□□□ -0.09
CSPG5-201ENST00000264723 KIF25-AS1Q9Y6Z4 181 aa14.51□□□□□ -0.09
CSPG5-201ENST00000264723 ITPR1Q14643 2758 aa14.5□□□□□ -0.09
CSPG5-201ENST00000264723 C9orf66Q5T8R8 295 aa14.5□□□□□ -0.09
CSPG5-201ENST00000264723 LINC00315P59091 139 aa14.5□□□□□ -0.09
CSPG5-201ENST00000264723 VSIG2Q96IQ7 327 aa14.5□□□□□ -0.09
CSPG5-201ENST00000264723 TRIAP1O43715 76 aa14.49□□□□□ -0.09
CSPG5-201ENST00000264723 TRAV26-1A0A087WT03 109 aa14.49□□□□□ -0.09
CSPG5-201ENST00000264723 TRBV6-5A0A0K0K1A5 114 aa14.49□□□□□ -0.09
CSPG5-201ENST00000264723 LY6G6DO95868 133 aa14.49□□□□□ -0.09
CSPG5-201ENST00000264723 DNAJC30Q96LL9 226 aa14.49□□□□□ -0.09
CSPG5-201ENST00000264723 B5MCH6 92 aa14.48□□□□□ -0.09
CSPG5-201ENST00000264723 TEP1Q99973 2627 aaKnown RBP14.48□□□□□ -0.09
CSPG5-201ENST00000264723 UBE2D1P51668 147 aa14.48□□□□□ -0.09
CSPG5-201ENST00000264723 Q6ZSN1 163 aa14.48□□□□□ -0.09
CSPG5-201ENST00000264723 CRYBA4P53673 196 aa14.47□□□□□ -0.09
CSPG5-201ENST00000264723 CHD6Q8TD26 2715 aa14.47□□□□□ -0.09
CSPG5-201ENST00000264723 DAZ2Q13117 558 aaKnown RBP14.47□□□□□ -0.09
CSPG5-201ENST00000264723 DAZ4Q86SG3 579 aaKnown RBP14.47□□□□□ -0.09
CSPG5-201ENST00000264723 DAZ3Q9NR90 486 aaKnown RBP14.47□□□□□ -0.09
CSPG5-201ENST00000264723 PLA2G2AP14555 144 aa14.46□□□□□ -0.09
CSPG5-201ENST00000264723 ODF3L2Q3SX64 289 aa14.46□□□□□ -0.09
CSPG5-201ENST00000264723 XGP55808 180 aa14.46□□□□□ -0.1
CSPG5-201ENST00000264723 SCGB1A1P11684 91 aa14.45□□□□□ -0.1
CSPG5-201ENST00000264723 POM121L12Q8N7R1 296 aa14.44□□□□□ -0.1
CSPG5-201ENST00000264723 MAST4O15021 2626 aa14.44□□□□□ -0.1
CSPG5-201ENST00000264723 LINC01546A6NGU7 62 aa14.43□□□□□ -0.1
CSPG5-201ENST00000264723 PIK3CD-AS1Q5SR53 167 aa14.43□□□□□ -0.1
CSPG5-201ENST00000264723 SVEP1Q4LDE5 3571 aa14.43□□□□□ -0.1
CSPG5-201ENST00000264723 RBMY1FQ15415 496 aaKnown RBP14.43□□□□□ -0.1
CSPG5-201ENST00000264723 ADAMTSL4-AS1Q5T5F5 129 aa14.42□□□□□ -0.1
CSPG5-201ENST00000264723 SS18L2Q9UHA2 77 aa14.42□□□□□ -0.1
CSPG5-201ENST00000264723 MIAQ16674 131 aa14.42□□□□□ -0.1
CSPG5-201ENST00000264723 Q9HAA7 133 aa14.42□□□□□ -0.1
CSPG5-201ENST00000264723 DCHS2Q6V1P9 2916 aa14.42□□□□□ -0.1
CSPG5-201ENST00000264723 RNF183Q96D59 192 aa14.41□□□□□ -0.1
CSPG5-201ENST00000264723 LOC100131303A0A0U1RQF7 123 aa14.41□□□□□ -0.1
CSPG5-201ENST00000264723 BAALC-AS2P0C853 105 aa14.41□□□□□ -0.1
CSPG5-201ENST00000264723 TRBV10-2A0A0K0K1G8 114 aa14.41□□□□□ -0.1
CSPG5-201ENST00000264723 FAM222AQ5U5X8 452 aa14.41□□□□□ -0.1
CSPG5-201ENST00000264723 ZANQ9Y493 2812 aa14.4□□□□□ -0.1
CSPG5-201ENST00000264723 ATP5G1P05496 136 aa14.4□□□□□ -0.1
CSPG5-201ENST00000264723 RPL32P62910 135 aaKnown RBP14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 119.7 ms