RNA–Protein interactions for RNA: ENST00000264346.11

HERC6-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERC6, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-201ENST00000264346 ITPR2Q14571 2701 aa9.24□□□□□ -0.93
HERC6-201ENST00000264346 CELSR1Q9NYQ6 3014 aa9.24□□□□□ -0.93
HERC6-201ENST00000264346 IGHV3-30-3P0DP02 117 aa9.23□□□□□ -0.93
HERC6-201ENST00000264346 NXPH4O95158 308 aa9.23□□□□□ -0.93
HERC6-201ENST00000264346 MALP21145 153 aa9.23□□□□□ -0.93
HERC6-201ENST00000264346 PPDPFLQ8WWR9 84 aa9.23□□□□□ -0.93
HERC6-201ENST00000264346 MAST4O15021 2626 aa9.23□□□□□ -0.93
HERC6-201ENST00000264346 F5H768 121 aa9.23□□□□□ -0.93
HERC6-201ENST00000264346 CITED1Q99966 193 aa9.23□□□□□ -0.93
HERC6-201ENST00000264346 MGAM2Q2M2H8 2515 aa9.23□□□□□ -0.93
HERC6-201ENST00000264346 IGLV4-3A0A075B6K6 122 aa9.22□□□□□ -0.93
HERC6-201ENST00000264346 RS1O15537 224 aa9.22□□□□□ -0.93
HERC6-201ENST00000264346 TCL1BO95988 128 aa9.22□□□□□ -0.93
HERC6-201ENST00000264346 C2orf82Q6UX34 121 aa9.22□□□□□ -0.93
HERC6-201ENST00000264346 CDIP1Q9H305 208 aa9.22□□□□□ -0.93
HERC6-201ENST00000264346 UBR5O95071 2799 aaPredicted RBP9.22□□□□□ -0.93
HERC6-201ENST00000264346 TRBV7-3A0A075B6L6 115 aa9.22□□□□□ -0.93
HERC6-201ENST00000264346 TRAV4A0A0B4J268 109 aa9.22□□□□□ -0.93
HERC6-201ENST00000264346 LEPROTO15243 131 aa9.22□□□□□ -0.93
HERC6-201ENST00000264346 TM2D2Q9BX73 214 aa9.22□□□□□ -0.93
HERC6-201ENST00000264346 TRBV27A0A0K0K1C4 114 aa9.22□□□□□ -0.93
HERC6-201ENST00000264346 XCL1P47992 114 aa9.22□□□□□ -0.93
HERC6-201ENST00000264346 FHL3Q13643 280 aa9.22□□□□□ -0.93
HERC6-201ENST00000264346 ZNF580Q9UK33 172 aa9.22□□□□□ -0.93
HERC6-201ENST00000264346 CELSR2Q9HCU4 2923 aa9.21□□□□□ -0.93
HERC6-201ENST00000264346 CMC4P56277 68 aaPredicted RBP9.21□□□□□ -0.93
HERC6-201ENST00000264346 LINC01006Q8NI28 216 aa9.21□□□□□ -0.93
HERC6-201ENST00000264346 IGLV10-54A0A075B6I4 117 aa9.21□□□□□ -0.94
HERC6-201ENST00000264346 TSHBP01222 138 aa9.21□□□□□ -0.94
HERC6-201ENST00000264346 CFC1BP0CG36 223 aa9.21□□□□□ -0.94
HERC6-201ENST00000264346 CFC1P0CG37 223 aa9.21□□□□□ -0.94
HERC6-201ENST00000264346 MRPL23Q16540 153 aaKnown RBP9.21□□□□□ -0.94
HERC6-201ENST00000264346 CFAP126Q5VTH2 177 aa9.21□□□□□ -0.94
HERC6-201ENST00000264346 Q9UF83 564 aa9.21□□□□□ -0.94
HERC6-201ENST00000264346 CDKN2A-AS1Q9UH64 79 aa9.21□□□□□ -0.94
HERC6-201ENST00000264346 C9orf85Q96MD7 179 aa9.21□□□□□ -0.94
HERC6-201ENST00000264346 CRLF1O75462 422 aa9.2□□□□□ -0.94
HERC6-201ENST00000264346 TSPAN13O95857 204 aa9.2□□□□□ -0.94
HERC6-201ENST00000264346 ZNF22P17026 224 aaPredicted RBP9.2□□□□□ -0.94
HERC6-201ENST00000264346 FBN2P35556 2912 aa9.2□□□□□ -0.94
HERC6-201ENST00000264346 SLC25A20O43772 301 aa9.2□□□□□ -0.94
HERC6-201ENST00000264346 SMCPP49901 116 aaPredicted RBP9.2□□□□□ -0.94
HERC6-201ENST00000264346 DEFB135Q30KP9 77 aa9.2□□□□□ -0.94
HERC6-201ENST00000264346 CFAP161Q6P656 301 aa9.2□□□□□ -0.94
HERC6-201ENST00000264346 K7EQD1 137 aa9.2□□□□□ -0.94
HERC6-201ENST00000264346 NDUFA7O95182 113 aa9.19□□□□□ -0.94
HERC6-201ENST00000264346 ODF3L2Q3SX64 289 aa9.19□□□□□ -0.94
HERC6-201ENST00000264346 SPANXA1Q9NS26 97 aa9.19□□□□□ -0.94
HERC6-201ENST00000264346 TEN1Q86WV5 123 aa9.19□□□□□ -0.94
HERC6-201ENST00000264346 LINC00482Q8N8I6 264 aa9.19□□□□□ -0.94
HERC6-201ENST00000264346 ODF3Q96PU9 254 aa9.19□□□□□ -0.94
HERC6-201ENST00000264346 LOC100131303A0A0U1RQF7 123 aa9.18□□□□□ -0.94
HERC6-201ENST00000264346 TEX49A0A1B0GTD5 131 aa9.18□□□□□ -0.94
HERC6-201ENST00000264346 PLA2G2AP14555 144 aa9.18□□□□□ -0.94
HERC6-201ENST00000264346 GYPEP15421 78 aa9.18□□□□□ -0.94
HERC6-201ENST00000264346 ATXN8Q156A1 80 aa9.18□□□□□ -0.94
HERC6-201ENST00000264346 C10orf126Q8N4M7 172 aa9.18□□□□□ -0.94
HERC6-201ENST00000264346 C15orf53Q8NAA6 179 aa9.18□□□□□ -0.94
HERC6-201ENST00000264346 IGIPA6NJ69 53 aa9.18□□□□□ -0.94
HERC6-201ENST00000264346 DAD1P61803 113 aa9.18□□□□□ -0.94
HERC6-201ENST00000264346 COPS9Q8WXC6 57 aa9.18□□□□□ -0.94
HERC6-201ENST00000264346 CARD19Q96LW7 228 aa9.18□□□□□ -0.94
HERC6-201ENST00000264346 SETXQ7Z333 2677 aaKnown RBP9.18□□□□□ -0.94
HERC6-201ENST00000264346 RBMY1A1P0DJD3 496 aaKnown RBP9.18□□□□□ -0.94
HERC6-201ENST00000264346 RBMY1CP0DJD4 496 aa9.18□□□□□ -0.94
HERC6-201ENST00000264346 RBMY1FQ15415 496 aaKnown RBP9.18□□□□□ -0.94
HERC6-201ENST00000264346 INAFM1C9JVW0 142 aa9.17□□□□□ -0.94
HERC6-201ENST00000264346 CRPP02741 224 aa9.17□□□□□ -0.94
HERC6-201ENST00000264346 IFITM1P13164 125 aa9.17□□□□□ -0.94
HERC6-201ENST00000264346 HERVK_113P63121 156 aa9.17□□□□□ -0.94
HERC6-201ENST00000264346 Q6ZSN1 163 aa9.17□□□□□ -0.94
HERC6-201ENST00000264346 UNC79Q9P2D8 2635 aa9.17□□□□□ -0.94
HERC6-201ENST00000264346 NDUFA11Q86Y39 141 aa9.17□□□□□ -0.94
HERC6-201ENST00000264346 TRAV8-4A0A0B4J246 113 aa9.17□□□□□ -0.94
HERC6-201ENST00000264346 LRRC75A-AS1Q8N1F1 130 aa9.17□□□□□ -0.94
HERC6-201ENST00000264346 SLC25A29Q8N8R3 303 aa9.17□□□□□ -0.94
HERC6-201ENST00000264346 RBMY1BA6NDE4 496 aaKnown RBP9.16□□□□□ -0.94
HERC6-201ENST00000264346 RBMY1EA6NEQ0 496 aaKnown RBP9.16□□□□□ -0.94
HERC6-201ENST00000264346 ANGP03950 147 aaKnown RBP9.16□□□□□ -0.94
HERC6-201ENST00000264346 RBMY1DP0C7P1 496 aaKnown RBP9.16□□□□□ -0.94
HERC6-201ENST00000264346 TSPEAR-AS2P59090 65 aa9.16□□□□□ -0.94
HERC6-201ENST00000264346 TMEM263Q8WUH6 116 aaKnown RBP9.16□□□□□ -0.94
HERC6-201ENST00000264346 ZMAT4Q9H898 229 aa9.16□□□□□ -0.94
HERC6-201ENST00000264346 A0A0J9YXY3 114 aa9.16□□□□□ -0.94
HERC6-201ENST00000264346 VSIG2Q96IQ7 327 aa9.15□□□□□ -0.94
HERC6-201ENST00000264346 RPL32P62910 135 aaKnown RBP9.15□□□□□ -0.94
HERC6-201ENST00000264346 PRO0461Q9UI25 63 aa9.15□□□□□ -0.94
HERC6-201ENST00000264346 KIF25-AS1Q9Y6Z4 181 aa9.15□□□□□ -0.94
HERC6-201ENST00000264346 IGHV1-58A0A0C4DH39 117 aa9.15□□□□□ -0.95
HERC6-201ENST00000264346 TRBV6-5A0A0K0K1A5 114 aa9.15□□□□□ -0.95
HERC6-201ENST00000264346 CLEC2BQ92478 149 aa9.15□□□□□ -0.95
HERC6-201ENST00000264346 NDUFV3P56181 108 aaKnown RBP9.14□□□□□ -0.95
HERC6-201ENST00000264346 RNF152Q8N8N0 203 aa9.14□□□□□ -0.95
HERC6-201ENST00000264346 LINC00315P59091 139 aa9.14□□□□□ -0.95
HERC6-201ENST00000264346 C16orf74Q96GX8 76 aa9.14□□□□□ -0.95
HERC6-201ENST00000264346 IGLV4-69A0A075B6H9 119 aa9.14□□□□□ -0.95
HERC6-201ENST00000264346 TMEM223A0PJW6 202 aa9.14□□□□□ -0.95
HERC6-201ENST00000264346 SS18Q15532 418 aa9.14□□□□□ -0.95
HERC6-201ENST00000264346 DNAJC30Q96LL9 226 aa9.14□□□□□ -0.95
HERC6-201ENST00000264346 TRAV25A0A0B4J276 109 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms