RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 TRBV6-5A0A0K0K1A5 114 aa10.35□□□□□ -0.75
CDH3-201ENST00000264012 NRACQ8N912 160 aa10.35□□□□□ -0.75
CDH3-201ENST00000264012 TRBV6-4A0A1B0GX49 114 aa10.35□□□□□ -0.75
CDH3-201ENST00000264012 IGKV2D-26A0A0A0MRZ7 120 aa10.35□□□□□ -0.75
CDH3-201ENST00000264012 FUSP35637 526 aaKnown RBP eCLIP10.34□□□□□ -0.75
CDH3-201ENST00000264012 WFDC10AQ9H1F0 79 aa10.34□□□□□ -0.75
CDH3-201ENST00000264012 MRPS12O15235 138 aaKnown RBP10.34□□□□□ -0.75
CDH3-201ENST00000264012 SPANXB1Q9NS25 103 aaPredicted RBP10.34□□□□□ -0.75
CDH3-201ENST00000264012 H7C423 109 aa10.33□□□□□ -0.76
CDH3-201ENST00000264012 LINC00310P59036 64 aa10.33□□□□□ -0.76
CDH3-201ENST00000264012 CPAMD8Q8IZJ3 1885 aa10.33□□□□□ -0.76
CDH3-201ENST00000264012 ZNF462Q96JM2 2506 aa10.33□□□□□ -0.76
CDH3-201ENST00000264012 TRBV6-8A0A0A6YYG3 113 aa10.33□□□□□ -0.76
CDH3-201ENST00000264012 TMEM223A0PJW6 202 aa10.33□□□□□ -0.76
CDH3-201ENST00000264012 MIFP14174 115 aa10.33□□□□□ -0.76
CDH3-201ENST00000264012 HIGD2BQ4VC39 106 aa10.33□□□□□ -0.76
CDH3-201ENST00000264012 SHISA2Q6UWI4 295 aa10.33□□□□□ -0.76
CDH3-201ENST00000264012 CHCHD10Q8WYQ3 142 aaPredicted RBP10.33□□□□□ -0.76
CDH3-201ENST00000264012 DIRC1Q969H9 104 aa10.33□□□□□ -0.76
CDH3-201ENST00000264012 PLA2G2AP14555 144 aa10.32□□□□□ -0.76
CDH3-201ENST00000264012 A0A0B4J2C4 111 aa10.32□□□□□ -0.76
CDH3-201ENST00000264012 MAPKAPK5-AS1Q8N8E1 139 aa10.32□□□□□ -0.76
CDH3-201ENST00000264012 GAS8-AS1O95177 125 aa10.32□□□□□ -0.76
CDH3-201ENST00000264012 PRM2P04554 102 aa10.32□□□□□ -0.76
CDH3-201ENST00000264012 C9orf85Q96MD7 179 aa10.32□□□□□ -0.76
CDH3-201ENST00000264012 FAM110AQ9BQ89 295 aa10.32□□□□□ -0.76
CDH3-201ENST00000264012 Q8N976 141 aa10.31□□□□□ -0.76
CDH3-201ENST00000264012 MTORP42345 2549 aa10.31□□□□□ -0.76
CDH3-201ENST00000264012 DEFB131BA0A096LNP1 70 aa10.31□□□□□ -0.76
CDH3-201ENST00000264012 CRYGDP07320 174 aa10.31□□□□□ -0.76
CDH3-201ENST00000264012 C2orf91Q6ZV80 131 aa10.31□□□□□ -0.76
CDH3-201ENST00000264012 SMIM20Q8N5G0 67 aa10.31□□□□□ -0.76
CDH3-201ENST00000264012 CNFNQ9BYD5 112 aa10.31□□□□□ -0.76
CDH3-201ENST00000264012 PTH2Q96A98 100 aa10.31□□□□□ -0.76
CDH3-201ENST00000264012 TSHBP01222 138 aa10.3□□□□□ -0.76
CDH3-201ENST00000264012 CRIP2P52943 208 aaPredicted RBP10.3□□□□□ -0.76
CDH3-201ENST00000264012 PYGO1Q9Y3Y4 419 aa10.3□□□□□ -0.76
CDH3-201ENST00000264012 UFSP1Q6NVU6 142 aa10.3□□□□□ -0.76
CDH3-201ENST00000264012 ATOX1O00244 68 aa10.3□□□□□ -0.76
CDH3-201ENST00000264012 EDN2P20800 178 aa10.3□□□□□ -0.76
CDH3-201ENST00000264012 POLR2KP53803 58 aaKnown RBP10.3□□□□□ -0.76
CDH3-201ENST00000264012 EXPH5Q8NEV8 1989 aa10.3□□□□□ -0.76
CDH3-201ENST00000264012 FASNP49327 2511 aaKnown RBP10.3□□□□□ -0.76
CDH3-201ENST00000264012 PKD1L2Q7Z442 2459 aa10.3□□□□□ -0.76
CDH3-201ENST00000264012 JMJD7-PLA2G4BH0Y9G9 81 aa10.29□□□□□ -0.76
CDH3-201ENST00000264012 TCL1BO95988 128 aa10.29□□□□□ -0.76
CDH3-201ENST00000264012 BBC3Q96PG8 261 aaPredicted RBP10.29□□□□□ -0.76
CDH3-201ENST00000264012 H3BQ85 93 aa10.29□□□□□ -0.76
CDH3-201ENST00000264012 IGHV4-28A0A0C4DH34 117 aa10.28□□□□□ -0.76
CDH3-201ENST00000264012 C4orf48Q5BLP8 95 aa10.28□□□□□ -0.76
CDH3-201ENST00000264012 EML5Q05BV3 1969 aa10.27□□□□□ -0.76
CDH3-201ENST00000264012 IGKV3D-7A0A0C4DH55 119 aa10.27□□□□□ -0.77
CDH3-201ENST00000264012 FAM236AA0A1B0GUQ0 79 aa10.27□□□□□ -0.77
CDH3-201ENST00000264012 FAM236BA0A1B0GV22 79 aa10.27□□□□□ -0.77
CDH3-201ENST00000264012 SPATA25Q9BR10 227 aa10.27□□□□□ -0.77
CDH3-201ENST00000264012 DNAH12Q6ZR08 3092 aa10.27□□□□□ -0.77
CDH3-201ENST00000264012 UBE2AP49459 152 aa10.26□□□□□ -0.77
CDH3-201ENST00000264012 RNF183Q96D59 192 aa10.26□□□□□ -0.77
CDH3-201ENST00000264012 ODF3L2Q3SX64 289 aa10.26□□□□□ -0.77
CDH3-201ENST00000264012 LINC00308Q8TCZ7 52 aa10.26□□□□□ -0.77
CDH3-201ENST00000264012 SMR3AQ99954 134 aa10.26□□□□□ -0.77
CDH3-201ENST00000264012 IBA57-AS1B1ANH7 110 aa10.25□□□□□ -0.77
CDH3-201ENST00000264012 TMEM256-PLSCR3K7ERE1 68 aa10.25□□□□□ -0.77
CDH3-201ENST00000264012 RBM3P98179 157 aaKnown RBP10.25□□□□□ -0.77
CDH3-201ENST00000264012 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.25□□□□□ -0.77
CDH3-201ENST00000264012 RAI1Q7Z5J4 1906 aaPredicted RBP10.25□□□□□ -0.77
CDH3-201ENST00000264012 COX7BP24311 80 aa10.25□□□□□ -0.77
CDH3-201ENST00000264012 POLQO75417 2590 aa10.25□□□□□ -0.77
CDH3-201ENST00000264012 LOC100131303A0A0U1RQF7 123 aa10.25□□□□□ -0.77
CDH3-201ENST00000264012 NREPQ16612 68 aa10.25□□□□□ -0.77
CDH3-201ENST00000264012 IGKV2-24A0A0C4DH68 120 aa10.24□□□□□ -0.77
CDH3-201ENST00000264012 PIK3CD-AS1Q5SR53 167 aa10.24□□□□□ -0.77
CDH3-201ENST00000264012 A8MZ25 164 aa10.24□□□□□ -0.77
CDH3-201ENST00000264012 MT-ATP8P03928 68 aa10.24□□□□□ -0.77
CDH3-201ENST00000264012 LINC00643Q86TS7 51 aa10.24□□□□□ -0.77
CDH3-201ENST00000264012 KIR2DL5BQ8NHK3 375 aa10.24□□□□□ -0.77
CDH3-201ENST00000264012 UBE2D4Q9Y2X8 147 aa10.23□□□□□ -0.77
CDH3-201ENST00000264012 NDUFA7O95182 113 aa10.23□□□□□ -0.77
CDH3-201ENST00000264012 BRI3O95415 125 aa10.23□□□□□ -0.77
CDH3-201ENST00000264012 UTRNP46939 3433 aa10.22□□□□□ -0.77
CDH3-201ENST00000264012 J3KT08 172 aa10.22□□□□□ -0.77
CDH3-201ENST00000264012 NDUFV3P56181 108 aaKnown RBP10.22□□□□□ -0.77
CDH3-201ENST00000264012 CEP350Q5VT06 3117 aa10.21□□□□□ -0.77
CDH3-201ENST00000264012 TMEM258P61165 79 aa10.21□□□□□ -0.77
CDH3-201ENST00000264012 C14orf177Q52M58 125 aa10.21□□□□□ -0.77
CDH3-201ENST00000264012 A0A1B0GX51 115 aa10.21□□□□□ -0.77
CDH3-201ENST00000264012 MRGPRG-AS1Q2M3A8 158 aa10.21□□□□□ -0.77
CDH3-201ENST00000264012 NDUFS5O43920 106 aa10.21□□□□□ -0.78
CDH3-201ENST00000264012 URB1-AS1Q96HZ7 61 aa10.21□□□□□ -0.78
CDH3-201ENST00000264012 C14orf132Q9NPU4 83 aa10.21□□□□□ -0.78
CDH3-201ENST00000264012 ZNF580Q9UK33 172 aa10.21□□□□□ -0.78
CDH3-201ENST00000264012 XAGE1AQ9HD64 81 aa10.2□□□□□ -0.78
CDH3-201ENST00000264012 MRPS36P82909 103 aaKnown RBP10.2□□□□□ -0.78
CDH3-201ENST00000264012 EPG5Q9HCE0 2579 aa10.19□□□□□ -0.78
CDH3-201ENST00000264012 TRIAP1O43715 76 aa10.19□□□□□ -0.78
CDH3-201ENST00000264012 KPRPQ5T749 579 aaPredicted RBP10.19□□□□□ -0.78
CDH3-201ENST00000264012 CD164L2Q6UWJ8 174 aa10.19□□□□□ -0.78
CDH3-201ENST00000264012 COX8CQ7Z4L0 72 aa10.19□□□□□ -0.78
CDH3-201ENST00000264012 UBE2D3P61077 147 aa10.18□□□□□ -0.78
CDH3-201ENST00000264012 UBE2D2P62837 147 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms