RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 Q6ZUT4 128 aa6.65□□□□□ -1.35
SNRNP40-201ENST00000263694 ERASQ7Z444 233 aa6.65□□□□□ -1.35
SNRNP40-201ENST00000263694 SPATA12Q7Z6I5 190 aa6.65□□□□□ -1.35
SNRNP40-201ENST00000263694 OR10D4PQ8NGN7 298 aa6.65□□□□□ -1.35
SNRNP40-201ENST00000263694 IFI27L1Q96BM0 104 aa6.65□□□□□ -1.35
SNRNP40-201ENST00000263694 PACRGQ96M98 296 aaPredicted RBP6.65□□□□□ -1.35
SNRNP40-201ENST00000263694 IGLV4-3A0A075B6K6 122 aa6.64□□□□□ -1.35
SNRNP40-201ENST00000263694 TRAV8-6A0A0B4J262 113 aa6.64□□□□□ -1.35
SNRNP40-201ENST00000263694 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.64□□□□□ -1.35
SNRNP40-201ENST00000263694 IGHV3-30P01768 117 aa6.64□□□□□ -1.35
SNRNP40-201ENST00000263694 IGHV3-33P01772 117 aa6.64□□□□□ -1.35
SNRNP40-201ENST00000263694 C3orf79P0CE67 100 aa6.64□□□□□ -1.35
SNRNP40-201ENST00000263694 IGHV3-30-3P0DP02 117 aa6.64□□□□□ -1.35
SNRNP40-201ENST00000263694 IGHV3-30-5P0DP03 117 aa6.64□□□□□ -1.35
SNRNP40-201ENST00000263694 G0S2P27469 103 aa6.64□□□□□ -1.35
SNRNP40-201ENST00000263694 CCL18P55774 89 aa6.64□□□□□ -1.35
SNRNP40-201ENST00000263694 KRTDAPP60985 99 aa6.64□□□□□ -1.35
SNRNP40-201ENST00000263694 RBX1P62877 108 aa6.64□□□□□ -1.35
SNRNP40-201ENST00000263694 PRSS1P07477 247 aa6.63□□□□□ -1.35
SNRNP40-201ENST00000263694 DGAT2L7PQ6IED9 249 aa6.63□□□□□ -1.35
SNRNP40-201ENST00000263694 MRPL52Q86TS9 123 aaKnown RBP6.63□□□□□ -1.35
SNRNP40-201ENST00000263694 BAALCQ8WXS3 180 aa6.63□□□□□ -1.35
SNRNP40-201ENST00000263694 SPANXA1Q9NS26 97 aa6.63□□□□□ -1.35
SNRNP40-201ENST00000263694 HSPB8Q9UJY1 196 aa6.63□□□□□ -1.35
SNRNP40-201ENST00000263694 MRPS16Q9Y3D3 137 aaKnown RBP6.63□□□□□ -1.35
SNRNP40-201ENST00000263694 PYGO1Q9Y3Y4 419 aa6.63□□□□□ -1.35
SNRNP40-201ENST00000263694 IGKV3OR2-268A0A0C4DH90 116 aa6.62□□□□□ -1.35
SNRNP40-201ENST00000263694 PRSS29PA6NIE9 313 aa6.62□□□□□ -1.35
SNRNP40-201ENST00000263694 H7C423 109 aa6.62□□□□□ -1.35
SNRNP40-201ENST00000263694 ATP5LO75964 103 aa6.62□□□□□ -1.35
SNRNP40-201ENST00000263694 CASC10Q5T4H9 136 aa6.62□□□□□ -1.35
SNRNP40-201ENST00000263694 CLPSL2Q6UWE3 100 aa6.62□□□□□ -1.35
SNRNP40-201ENST00000263694 Q6ZN92 141 aa6.62□□□□□ -1.35
SNRNP40-201ENST00000263694 UBE2DNLQ8IWF7 75 aa6.62□□□□□ -1.35
SNRNP40-201ENST00000263694 ZNF664Q8N3J9 261 aa6.62□□□□□ -1.35
SNRNP40-201ENST00000263694 OR5A1Q8NGJ0 315 aa6.62□□□□□ -1.35
SNRNP40-201ENST00000263694 TIMM17AQ99595 171 aa6.62□□□□□ -1.35
SNRNP40-201ENST00000263694 PMCHL2Q9BQD1 86 aa6.62□□□□□ -1.35
SNRNP40-201ENST00000263694 TIMM21Q9BVV7 248 aa6.62□□□□□ -1.35
SNRNP40-201ENST00000263694 CDC42SE2Q9NRR3 84 aa6.62□□□□□ -1.35
SNRNP40-201ENST00000263694 A0A087WX48 190 aa6.61□□□□□ -1.35
SNRNP40-201ENST00000263694 AKR1D1P51857 326 aa6.61□□□□□ -1.35
SNRNP40-201ENST00000263694 TMEM141Q96I45 108 aa6.61□□□□□ -1.35
SNRNP40-201ENST00000263694 TMEM101Q96IK0 257 aa6.61□□□□□ -1.35
SNRNP40-201ENST00000263694 MAP1LC3CQ9BXW4 147 aa6.61□□□□□ -1.35
SNRNP40-201ENST00000263694 A0A1B0GUV1 79 aa6.61□□□□□ -1.35
SNRNP40-201ENST00000263694 SYS1-DBNDD2H3BUS1 97 aa6.61□□□□□ -1.35
SNRNP40-201ENST00000263694 ANGP03950 147 aaKnown RBP6.61□□□□□ -1.35
SNRNP40-201ENST00000263694 VCX2Q9H322 139 aa6.61□□□□□ -1.35
SNRNP40-201ENST00000263694 CST9LQ9H4G1 147 aa6.61□□□□□ -1.35
SNRNP40-201ENST00000263694 KLK12Q9UKR0 248 aa6.61□□□□□ -1.35
SNRNP40-201ENST00000263694 CSDC2Q9Y534 153 aaKnown RBP6.61□□□□□ -1.35
SNRNP40-201ENST00000263694 LINC01549A6NIU2 74 aa6.6□□□□□ -1.35
SNRNP40-201ENST00000263694 SIVA1O15304 175 aa6.6□□□□□ -1.35
SNRNP40-201ENST00000263694 ZNF25P17030 456 aaPredicted RBP6.6□□□□□ -1.35
SNRNP40-201ENST00000263694 TCTAP57738 103 aa6.6□□□□□ -1.35
SNRNP40-201ENST00000263694 MRPS36P82909 103 aaKnown RBP6.6□□□□□ -1.35
SNRNP40-201ENST00000263694 LINC00269Q8N2A0 174 aa6.6□□□□□ -1.35
SNRNP40-201ENST00000263694 AMELXQ99217 191 aa6.6□□□□□ -1.35
SNRNP40-201ENST00000263694 Q9H8V8 135 aa6.6□□□□□ -1.35
SNRNP40-201ENST00000263694 TRAV13-1A0A0B4J241 112 aa6.59□□□□□ -1.35
SNRNP40-201ENST00000263694 PMVKQ15126 192 aa6.59□□□□□ -1.35
SNRNP40-201ENST00000263694 TEX43Q6ZNM6 134 aa6.59□□□□□ -1.35
SNRNP40-201ENST00000263694 UPK3BQ9BT76 320 aa6.59□□□□□ -1.35
SNRNP40-201ENST00000263694 C3orf84H3BNL1 204 aa6.58□□□□□ -1.36
SNRNP40-201ENST00000263694 DNAH10OSP0CZ25 163 aa6.58□□□□□ -1.36
SNRNP40-201ENST00000263694 SMAGPQ0VAQ4 97 aa6.58□□□□□ -1.36
SNRNP40-201ENST00000263694 ODF1Q14990 250 aa6.58□□□□□ -1.36
SNRNP40-201ENST00000263694 LINC01556Q5JQF7 62 aa6.58□□□□□ -1.36
SNRNP40-201ENST00000263694 ATOH7Q8N100 152 aa6.58□□□□□ -1.36
SNRNP40-201ENST00000263694 MRPL35Q9NZE8 188 aaKnown RBP6.58□□□□□ -1.36
SNRNP40-201ENST00000263694 IGLV10-54A0A075B6I4 117 aa6.57□□□□□ -1.36
SNRNP40-201ENST00000263694 A0A0J9YXV3 536 aa6.57□□□□□ -1.36
SNRNP40-201ENST00000263694 SCGB1D1O95968 90 aa6.57□□□□□ -1.36
SNRNP40-201ENST00000263694 REG3AQ06141 175 aa6.57□□□□□ -1.36
SNRNP40-201ENST00000263694 PET117Q6UWS5 81 aa6.57□□□□□ -1.36
SNRNP40-201ENST00000263694 ENHOQ6UWT2 76 aa6.57□□□□□ -1.36
SNRNP40-201ENST00000263694 CHTOPQ9Y3Y2 248 aaKnown RBP6.57□□□□□ -1.36
SNRNP40-201ENST00000263694 IGLV4-69A0A075B6H9 119 aa6.57□□□□□ -1.36
SNRNP40-201ENST00000263694 TRAV12-1A0A0B4J245 112 aa6.57□□□□□ -1.36
SNRNP40-201ENST00000263694 NPSP0C0P6 89 aa6.57□□□□□ -1.36
SNRNP40-201ENST00000263694 UBE2D1P51668 147 aa6.57□□□□□ -1.36
SNRNP40-201ENST00000263694 PKIAP61925 76 aa6.57□□□□□ -1.36
SNRNP40-201ENST00000263694 COX6A2Q02221 97 aa6.57□□□□□ -1.36
SNRNP40-201ENST00000263694 PYY3Q5JQD4 70 aa6.57□□□□□ -1.36
SNRNP40-201ENST00000263694 PAPPA-AS1Q5QFB9 102 aa6.57□□□□□ -1.36
SNRNP40-201ENST00000263694 LINC01545Q5VT33 79 aa6.57□□□□□ -1.36
SNRNP40-201ENST00000263694 CDPF1Q6NVV7 123 aa6.57□□□□□ -1.36
SNRNP40-201ENST00000263694 UBE2WQ96B02 151 aa6.57□□□□□ -1.36
SNRNP40-201ENST00000263694 KRTAP1-5Q9BYS1 174 aa6.57□□□□□ -1.36
SNRNP40-201ENST00000263694 DNAH1Q9P2D7 4330 aa6.57□□□□□ -1.36
SNRNP40-201ENST00000263694 VPS13DQ5THJ4 4388 aa6.56□□□□□ -1.36
SNRNP40-201ENST00000263694 LINC00959A0A1B0GUT2 108 aa6.56□□□□□ -1.36
SNRNP40-201ENST00000263694 LGALS9CQ6DKI2 356 aa6.56□□□□□ -1.36
SNRNP40-201ENST00000263694 C2orf88Q9BSF0 95 aa6.56□□□□□ -1.36
SNRNP40-201ENST00000263694 C11orf86A6NJI1 115 aa6.55□□□□□ -1.36
SNRNP40-201ENST00000263694 LY6G6CO95867 125 aa6.55□□□□□ -1.36
SNRNP40-201ENST00000263694 JOSD1Q15040 202 aaPredicted RBP6.55□□□□□ -1.36
SNRNP40-201ENST00000263694 LINC00242Q5T6M2 205 aa6.55□□□□□ -1.36
SNRNP40-201ENST00000263694 Q9HAA7 133 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms