RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 IGKV2-29A2NJV5 120 aaPredicted RBP10.91□□□□□ -0.66
XRCC1-201ENST00000262887 LINC00308Q8TCZ7 52 aa10.91□□□□□ -0.66
XRCC1-201ENST00000262887 CXCL5P42830 114 aa10.9□□□□□ -0.66
XRCC1-201ENST00000262887 DAZ2Q13117 558 aaKnown RBP10.9□□□□□ -0.66
XRCC1-201ENST00000262887 DAZ4Q86SG3 579 aaKnown RBP10.9□□□□□ -0.66
XRCC1-201ENST00000262887 DAZ3Q9NR90 486 aaKnown RBP10.9□□□□□ -0.66
XRCC1-201ENST00000262887 CHCHD7Q9BUK0 85 aa10.9□□□□□ -0.66
XRCC1-201ENST00000262887 CDKN2A-AS1Q9UH64 79 aa10.9□□□□□ -0.66
XRCC1-201ENST00000262887 SDIM1Q6ZPB5 146 aa10.9□□□□□ -0.67
XRCC1-201ENST00000262887 hADV29S1A0JD25 119 aa10.89□□□□□ -0.67
XRCC1-201ENST00000262887 K7EQG2 157 aa10.89□□□□□ -0.67
XRCC1-201ENST00000262887 DPH3Q96FX2 82 aa10.89□□□□□ -0.67
XRCC1-201ENST00000262887 PEMTQ9UBM1 199 aa10.89□□□□□ -0.67
XRCC1-201ENST00000262887 Q9UF83 564 aa10.89□□□□□ -0.67
XRCC1-201ENST00000262887 KNCNA6PVL3 124 aa10.89□□□□□ -0.67
XRCC1-201ENST00000262887 TRACP01848 142 aa10.89□□□□□ -0.67
XRCC1-201ENST00000262887 C5orf38Q86SI9 138 aa10.89□□□□□ -0.67
XRCC1-201ENST00000262887 A6NDX4 124 aa10.88□□□□□ -0.67
XRCC1-201ENST00000262887 IGHV4-38-2P0DP08 117 aa10.88□□□□□ -0.67
XRCC1-201ENST00000262887 A0A0U1RRA0 63 aa10.88□□□□□ -0.67
XRCC1-201ENST00000262887 BAALC-AS2P0C853 105 aa10.88□□□□□ -0.67
XRCC1-201ENST00000262887 LINC00467Q9BRT7 94 aa10.88□□□□□ -0.67
XRCC1-201ENST00000262887 C4orf26Q17RF5 130 aa10.87□□□□□ -0.67
XRCC1-201ENST00000262887 KIR2DL5BQ8NHK3 375 aa10.87□□□□□ -0.67
XRCC1-201ENST00000262887 ZNF625Q96I27 306 aaPredicted RBP10.87□□□□□ -0.67
XRCC1-201ENST00000262887 RBMY1A1P0DJD3 496 aaKnown RBP10.86□□□□□ -0.67
XRCC1-201ENST00000262887 RBMY1CP0DJD4 496 aa10.86□□□□□ -0.67
XRCC1-201ENST00000262887 RBMY1FQ15415 496 aaKnown RBP10.86□□□□□ -0.67
XRCC1-201ENST00000262887 BEAN1Q3B7T3 259 aa10.86□□□□□ -0.67
XRCC1-201ENST00000262887 Q8N2B8 174 aa10.86□□□□□ -0.67
XRCC1-201ENST00000262887 Q9H8V8 135 aa10.86□□□□□ -0.67
XRCC1-201ENST00000262887 IGHV3-38A0A0C4DH36 116 aa10.86□□□□□ -0.67
XRCC1-201ENST00000262887 ATOX1O00244 68 aa10.86□□□□□ -0.67
XRCC1-201ENST00000262887 TIRAPP58753 221 aa10.86□□□□□ -0.67
XRCC1-201ENST00000262887 CFHR3Q02985 330 aa10.86□□□□□ -0.67
XRCC1-201ENST00000262887 ABCA12Q86UK0 2595 aa10.86□□□□□ -0.67
XRCC1-201ENST00000262887 IGLV5-45A0A087WSX0 123 aa10.85□□□□□ -0.67
XRCC1-201ENST00000262887 MRAPQ8TCY5 172 aa10.85□□□□□ -0.67
XRCC1-201ENST00000262887 COPS9Q8WXC6 57 aa10.85□□□□□ -0.67
XRCC1-201ENST00000262887 TMEM258P61165 79 aa10.85□□□□□ -0.67
XRCC1-201ENST00000262887 CYSTM1Q9H1C7 97 aa10.85□□□□□ -0.67
XRCC1-201ENST00000262887 ZANQ9Y493 2812 aa10.85□□□□□ -0.67
XRCC1-201ENST00000262887 HRCT1Q6UXD1 115 aa10.85□□□□□ -0.67
XRCC1-201ENST00000262887 Q6ZSN1 163 aa10.85□□□□□ -0.67
XRCC1-201ENST00000262887 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.85□□□□□ -0.67
XRCC1-201ENST00000262887 HIST1H4AP62805 103 aaKnown RBP10.84□□□□□ -0.67
XRCC1-201ENST00000262887 INAFM2P0DMQ5 153 aa10.84□□□□□ -0.67
XRCC1-201ENST00000262887 DGAT2L7PQ6IED9 249 aa10.84□□□□□ -0.67
XRCC1-201ENST00000262887 SOSTDC1Q6X4U4 206 aa10.84□□□□□ -0.67
XRCC1-201ENST00000262887 C22orf24Q9Y442 160 aa10.84□□□□□ -0.67
XRCC1-201ENST00000262887 OXTP01178 125 aa10.83□□□□□ -0.68
XRCC1-201ENST00000262887 DOPEY2Q9Y3R5 2298 aa10.83□□□□□ -0.68
XRCC1-201ENST00000262887 PRM2P04554 102 aa10.83□□□□□ -0.68
XRCC1-201ENST00000262887 COX6A2Q02221 97 aa10.83□□□□□ -0.68
XRCC1-201ENST00000262887 FAM222AQ5U5X8 452 aa10.83□□□□□ -0.68
XRCC1-201ENST00000262887 ABCA2Q9BZC7 2435 aa10.82□□□□□ -0.68
XRCC1-201ENST00000262887 PSMB8P28062 276 aa10.82□□□□□ -0.68
XRCC1-201ENST00000262887 Q5XG85 94 aa10.82□□□□□ -0.68
XRCC1-201ENST00000262887 IGLV5-39A0A0G2JS06 123 aa10.82□□□□□ -0.68
XRCC1-201ENST00000262887 FAM218AQ96MZ4 157 aa10.82□□□□□ -0.68
XRCC1-201ENST00000262887 SYNJ2BPP57105 145 aa10.81□□□□□ -0.68
XRCC1-201ENST00000262887 RNF152Q8N8N0 203 aa10.81□□□□□ -0.68
XRCC1-201ENST00000262887 NACAE9PAV3 2078 aa10.81□□□□□ -0.68
XRCC1-201ENST00000262887 C10orf99Q6UWK7 81 aa10.81□□□□□ -0.68
XRCC1-201ENST00000262887 IGHV4-61A0A0C4DH41 118 aa10.8□□□□□ -0.68
XRCC1-201ENST00000262887 KLRB1Q12918 225 aa10.8□□□□□ -0.68
XRCC1-201ENST00000262887 DSCR8Q96T75 97 aa10.8□□□□□ -0.68
XRCC1-201ENST00000262887 UCNP55089 124 aa10.8□□□□□ -0.68
XRCC1-201ENST00000262887 PRORYQ9H606 182 aa10.8□□□□□ -0.68
XRCC1-201ENST00000262887 TENM4Q6N022 2769 aa10.8□□□□□ -0.68
XRCC1-201ENST00000262887 FBN2P35556 2912 aa10.79□□□□□ -0.68
XRCC1-201ENST00000262887 IGHV3OR16-12A0A075B7B8 117 aa10.79□□□□□ -0.68
XRCC1-201ENST00000262887 PRB1P04280 392 aa10.79□□□□□ -0.68
XRCC1-201ENST00000262887 ZNF415Q09FC8 603 aa10.79□□□□□ -0.68
XRCC1-201ENST00000262887 PRIMA1Q86XR5 153 aa10.79□□□□□ -0.68
XRCC1-201ENST00000262887 MALP21145 153 aa10.79□□□□□ -0.68
XRCC1-201ENST00000262887 SORL1Q92673 2214 aa10.78□□□□□ -0.68
XRCC1-201ENST00000262887 LINC00242Q5T6M2 205 aa10.78□□□□□ -0.68
XRCC1-201ENST00000262887 Q9HAA7 133 aa10.78□□□□□ -0.68
XRCC1-201ENST00000262887 SMIM1B2RUZ4 78 aa10.77□□□□□ -0.68
XRCC1-201ENST00000262887 IGHV3-53P01767 116 aa10.77□□□□□ -0.68
XRCC1-201ENST00000262887 RPL18AQ02543 176 aaKnown RBP10.77□□□□□ -0.69
XRCC1-201ENST00000262887 PIK3CD-AS1Q5SR53 167 aa10.77□□□□□ -0.69
XRCC1-201ENST00000262887 HIST2H2BCQ6DN03 193 aa10.77□□□□□ -0.69
XRCC1-201ENST00000262887 HIST2H2BDQ6DRA6 164 aa10.77□□□□□ -0.69
XRCC1-201ENST00000262887 PIMREGQ9BSJ6 248 aa10.76□□□□□ -0.69
XRCC1-201ENST00000262887 DEFB131AP59861 70 aa10.76□□□□□ -0.69
XRCC1-201ENST00000262887 UPK3BQ9BT76 320 aa10.76□□□□□ -0.69
XRCC1-201ENST00000262887 ZNF469Q96JG9 3925 aaPredicted RBP10.75□□□□□ -0.69
XRCC1-201ENST00000262887 TRAV13-1A0A0B4J241 112 aa10.75□□□□□ -0.69
XRCC1-201ENST00000262887 DNAL4O96015 105 aa10.75□□□□□ -0.69
XRCC1-201ENST00000262887 SERP2Q8N6R1 65 aa10.75□□□□□ -0.69
XRCC1-201ENST00000262887 HOXD3P31249 432 aaPredicted RBP10.74□□□□□ -0.69
XRCC1-201ENST00000262887 RPL28P46779 137 aaKnown RBP10.74□□□□□ -0.69
XRCC1-201ENST00000262887 TRAV13-2A0A0B4J235 113 aa10.74□□□□□ -0.69
XRCC1-201ENST00000262887 USP9YO00507 2555 aaPredicted RBP10.73□□□□□ -0.69
XRCC1-201ENST00000262887 RBMY1BA6NDE4 496 aaKnown RBP10.73□□□□□ -0.69
XRCC1-201ENST00000262887 RBMY1EA6NEQ0 496 aaKnown RBP10.73□□□□□ -0.69
XRCC1-201ENST00000262887 PF4P02776 101 aa10.73□□□□□ -0.69
XRCC1-201ENST00000262887 RBMY1DP0C7P1 496 aaKnown RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms