RNA–Protein interactions for RNA: ENST00000262327.9

LIG3-201, Transcript of DNA ligase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIG3, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-201ENST00000262327 FAM19A5Q7Z5A7 132 aaPredicted RBP7.36□□□□□ -1.23
LIG3-201ENST00000262327 AKAP9Q99996 3911 aa7.36□□□□□ -1.23
LIG3-201ENST00000262327 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.36□□□□□ -1.23
LIG3-201ENST00000262327 IGKV2-29A2NJV5 120 aaPredicted RBP7.36□□□□□ -1.23
LIG3-201ENST00000262327 SBSPONQ8IVN8 264 aa7.36□□□□□ -1.23
LIG3-201ENST00000262327 LEPROTO15243 131 aa7.35□□□□□ -1.23
LIG3-201ENST00000262327 IGHV3-33P01772 117 aa7.35□□□□□ -1.23
LIG3-201ENST00000262327 NSUN5P1Q3KNT7 163 aa7.35□□□□□ -1.23
LIG3-201ENST00000262327 KHDC1LQ5JSQ8 128 aa7.35□□□□□ -1.23
LIG3-201ENST00000262327 C15orf53Q8NAA6 179 aa7.35□□□□□ -1.23
LIG3-201ENST00000262327 IGHV3-30-3P0DP02 117 aa7.35□□□□□ -1.23
LIG3-201ENST00000262327 DAND5Q8N907 189 aa7.35□□□□□ -1.23
LIG3-201ENST00000262327 ZNF469Q96JG9 3925 aaPredicted RBP7.34□□□□□ -1.23
LIG3-201ENST00000262327 APCP25054 2843 aa7.34□□□□□ -1.23
LIG3-201ENST00000262327 A0A0J9YXY3 114 aa7.34□□□□□ -1.23
LIG3-201ENST00000262327 SLC25A20O43772 301 aa7.34□□□□□ -1.23
LIG3-201ENST00000262327 RHOHQ15669 191 aa7.34□□□□□ -1.23
LIG3-201ENST00000262327 ADAMTSL4-AS1Q5T5F5 129 aa7.34□□□□□ -1.23
LIG3-201ENST00000262327 Q6YL49 198 aa7.34□□□□□ -1.23
LIG3-201ENST00000262327 TMEM263Q8WUH6 116 aaKnown RBP7.34□□□□□ -1.23
LIG3-201ENST00000262327 FAM104AQ969W3 186 aa7.34□□□□□ -1.23
LIG3-201ENST00000262327 ODF3Q96PU9 254 aa7.34□□□□□ -1.23
LIG3-201ENST00000262327 A0A0U1RRA0 63 aa7.33□□□□□ -1.24
LIG3-201ENST00000262327 RBMY1BA6NDE4 496 aaKnown RBP7.33□□□□□ -1.24
LIG3-201ENST00000262327 RBMY1EA6NEQ0 496 aaKnown RBP7.33□□□□□ -1.24
LIG3-201ENST00000262327 RBMY1DP0C7P1 496 aaKnown RBP7.33□□□□□ -1.24
LIG3-201ENST00000262327 LYRM7Q5U5X0 104 aa7.33□□□□□ -1.24
LIG3-201ENST00000262327 TIMM21Q9BVV7 248 aa7.33□□□□□ -1.24
LIG3-201ENST00000262327 IGHV3OR16-12A0A075B7B8 117 aa7.33□□□□□ -1.24
LIG3-201ENST00000262327 KRTAP1-1Q07627 177 aa7.32□□□□□ -1.24
LIG3-201ENST00000262327 NTN5Q8WTR8 489 aaPredicted RBP7.32□□□□□ -1.24
LIG3-201ENST00000262327 TRGV11A0A075B6L2 103 aa7.31□□□□□ -1.24
LIG3-201ENST00000262327 C11orf44Q8N8P7 122 aa7.31□□□□□ -1.24
LIG3-201ENST00000262327 ZNF625Q96I27 306 aaPredicted RBP7.31□□□□□ -1.24
LIG3-201ENST00000262327 TMEM101Q96IK0 257 aa7.31□□□□□ -1.24
LIG3-201ENST00000262327 EDA2RQ9HAV5 297 aa7.31□□□□□ -1.24
LIG3-201ENST00000262327 KLK5Q9Y337 293 aaPredicted RBP7.31□□□□□ -1.24
LIG3-201ENST00000262327 J3KT08 172 aa7.31□□□□□ -1.24
LIG3-201ENST00000262327 M0R2P5 195 aa7.31□□□□□ -1.24
LIG3-201ENST00000262327 TRIAP1O43715 76 aa7.31□□□□□ -1.24
LIG3-201ENST00000262327 TMEM61Q8N0U2 210 aa7.31□□□□□ -1.24
LIG3-201ENST00000262327 TMEM86BQ8N661 226 aa7.31□□□□□ -1.24
LIG3-201ENST00000262327 LINC00467Q9BRT7 94 aa7.31□□□□□ -1.24
LIG3-201ENST00000262327 NDUFA12Q9UI09 145 aa7.31□□□□□ -1.24
LIG3-201ENST00000262327 TEX49A0A1B0GTD5 131 aa7.3□□□□□ -1.24
LIG3-201ENST00000262327 TRAV8-4A0A0B4J246 113 aa7.3□□□□□ -1.24
LIG3-201ENST00000262327 HERVK_113P63121 156 aa7.3□□□□□ -1.24
LIG3-201ENST00000262327 C9orf153Q5TBE3 101 aa7.3□□□□□ -1.24
LIG3-201ENST00000262327 PDZD2O15018 2839 aa7.3□□□□□ -1.24
LIG3-201ENST00000262327 F5H768 121 aa7.29□□□□□ -1.24
LIG3-201ENST00000262327 NDUFA7O95182 113 aa7.29□□□□□ -1.24
LIG3-201ENST00000262327 CLEC2BQ92478 149 aa7.29□□□□□ -1.24
LIG3-201ENST00000262327 LITAFQ99732 161 aa7.29□□□□□ -1.24
LIG3-201ENST00000262327 CITED2Q99967 270 aaPredicted RBP7.29□□□□□ -1.24
LIG3-201ENST00000262327 ZNF702PQ9H963 129 aa7.29□□□□□ -1.24
LIG3-201ENST00000262327 GCN1Q92616 2671 aaKnown RBP7.29□□□□□ -1.24
LIG3-201ENST00000262327 H3BMM0 161 aa7.29□□□□□ -1.24
LIG3-201ENST00000262327 UBE2E2Q96LR5 201 aa7.29□□□□□ -1.24
LIG3-201ENST00000262327 IGHV3-53P01767 116 aa7.29□□□□□ -1.24
LIG3-201ENST00000262327 CHCHD7Q9BUK0 85 aa7.29□□□□□ -1.24
LIG3-201ENST00000262327 XCL2Q9UBD3 114 aa7.29□□□□□ -1.24
LIG3-201ENST00000262327 UNC79Q9P2D8 2635 aa7.28□□□□□ -1.24
LIG3-201ENST00000262327 LINC01620Q4KN68 170 aa7.28□□□□□ -1.24
LIG3-201ENST00000262327 OR13C6PQ8NH95 151 aa7.28□□□□□ -1.24
LIG3-201ENST00000262327 CDKN2A-AS1Q9UH64 79 aa7.28□□□□□ -1.24
LIG3-201ENST00000262327 MTORP42345 2549 aa7.28□□□□□ -1.24
LIG3-201ENST00000262327 A0A0B4J2C4 111 aa7.28□□□□□ -1.24
LIG3-201ENST00000262327 IGHV1-58A0A0C4DH39 117 aa7.28□□□□□ -1.24
LIG3-201ENST00000262327 MRPS36P82909 103 aaKnown RBP7.28□□□□□ -1.24
LIG3-201ENST00000262327 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.28□□□□□ -1.24
LIG3-201ENST00000262327 UBE2D4Q9Y2X8 147 aa7.27□□□□□ -1.25
LIG3-201ENST00000262327 TMEM89A2RUT3 159 aa7.27□□□□□ -1.25
LIG3-201ENST00000262327 ACANP16112 2415 aa7.27□□□□□ -1.25
LIG3-201ENST00000262327 FN1P02751 2386 aaKnown RBP7.27□□□□□ -1.25
LIG3-201ENST00000262327 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.26□□□□□ -1.25
LIG3-201ENST00000262327 A0A1W2PRX2 142 aa7.26□□□□□ -1.25
LIG3-201ENST00000262327 COX6A2Q02221 97 aa7.26□□□□□ -1.25
LIG3-201ENST00000262327 VSIG2Q96IQ7 327 aa7.26□□□□□ -1.25
LIG3-201ENST00000262327 NBPF19A0A087WUL8 3843 aa7.26□□□□□ -1.25
LIG3-201ENST00000262327 ATXN8Q156A1 80 aa7.26□□□□□ -1.25
LIG3-201ENST00000262327 DGAT2L7PQ6IED9 249 aa7.26□□□□□ -1.25
LIG3-201ENST00000262327 ICOSQ9Y6W8 199 aa7.26□□□□□ -1.25
LIG3-201ENST00000262327 Q8N2B8 174 aa7.26□□□□□ -1.25
LIG3-201ENST00000262327 DYNLRB2Q8TF09 96 aa7.26□□□□□ -1.25
LIG3-201ENST00000262327 FAM236AA0A1B0GUQ0 79 aa7.25□□□□□ -1.25
LIG3-201ENST00000262327 FAM236BA0A1B0GV22 79 aa7.25□□□□□ -1.25
LIG3-201ENST00000262327 C3orf22Q8N5N4 141 aa7.25□□□□□ -1.25
LIG3-201ENST00000262327 MAP6D1Q9H9H5 199 aa7.25□□□□□ -1.25
LIG3-201ENST00000262327 PYGO1Q9Y3Y4 419 aa7.25□□□□□ -1.25
LIG3-201ENST00000262327 A0A1B0GX51 115 aa7.25□□□□□ -1.25
LIG3-201ENST00000262327 ZNF415Q09FC8 603 aa7.25□□□□□ -1.25
LIG3-201ENST00000262327 C2orf82Q6UX34 121 aa7.25□□□□□ -1.25
LIG3-201ENST00000262327 TRAV13-1A0A0B4J241 112 aa7.24□□□□□ -1.25
LIG3-201ENST00000262327 RPL13AP40429 203 aaKnown RBP7.24□□□□□ -1.25
LIG3-201ENST00000262327 SETXQ7Z333 2677 aaKnown RBP7.24□□□□□ -1.25
LIG3-201ENST00000262327 ITPR3Q14573 2671 aa7.24□□□□□ -1.25
LIG3-201ENST00000262327 TRGV1A0A0A0MS02 117 aa7.24□□□□□ -1.25
LIG3-201ENST00000262327 TINCRA0A1B0GVN0 87 aa7.24□□□□□ -1.25
LIG3-201ENST00000262327 MIAQ16674 131 aa7.24□□□□□ -1.25
LIG3-201ENST00000262327 H7C423 109 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms