RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 C20orf203Q8NBC4 194 aa13.37□□□□□ -0.27
TRIM47-201ENST00000254816 RETNQ9HD89 108 aa13.37□□□□□ -0.27
TRIM47-201ENST00000254816 PRB2P02812 416 aaPredicted RBP13.36□□□□□ -0.27
TRIM47-201ENST00000254816 ZNF815PA8K554 130 aa13.36□□□□□ -0.27
TRIM47-201ENST00000254816 RPL36AP83881 106 aaKnown RBP13.36□□□□□ -0.27
TRIM47-201ENST00000254816 GTF2H5Q6ZYL4 71 aa13.36□□□□□ -0.27
TRIM47-201ENST00000254816 RPL36ALQ969Q0 106 aaKnown RBP13.36□□□□□ -0.27
TRIM47-201ENST00000254816 TRBV10-1A0A0K0K1A3 114 aa13.35□□□□□ -0.27
TRIM47-201ENST00000254816 MIFP14174 115 aa13.35□□□□□ -0.27
TRIM47-201ENST00000254816 PLEKHB2Q96CS7 222 aa13.35□□□□□ -0.27
TRIM47-201ENST00000254816 CELA1Q9UNI1 258 aa13.35□□□□□ -0.27
TRIM47-201ENST00000254816 LINC01549A6NIU2 74 aa13.34□□□□□ -0.27
TRIM47-201ENST00000254816 A8MZ25 164 aa13.34□□□□□ -0.27
TRIM47-201ENST00000254816 CHCHD7Q9BUK0 85 aa13.34□□□□□ -0.27
TRIM47-201ENST00000254816 SPCS1Q9Y6A9 102 aa13.34□□□□□ -0.27
TRIM47-201ENST00000254816 TRBV6-4A0A1B0GX49 114 aa13.33□□□□□ -0.28
TRIM47-201ENST00000254816 LYRM9A8MSI8 78 aa13.33□□□□□ -0.28
TRIM47-201ENST00000254816 CIDEAO60543 219 aa13.33□□□□□ -0.28
TRIM47-201ENST00000254816 COTL1Q14019 142 aa13.33□□□□□ -0.28
TRIM47-201ENST00000254816 TAL2Q16559 108 aa13.33□□□□□ -0.28
TRIM47-201ENST00000254816 TMEM170BQ5T4T1 132 aa13.33□□□□□ -0.28
TRIM47-201ENST00000254816 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.32□□□□□ -0.28
TRIM47-201ENST00000254816 IGKV2-29A2NJV5 120 aaPredicted RBP13.32□□□□□ -0.28
TRIM47-201ENST00000254816 FABP2P12104 132 aa13.32□□□□□ -0.28
TRIM47-201ENST00000254816 UBE2D3P61077 147 aa13.32□□□□□ -0.28
TRIM47-201ENST00000254816 UBE2D2P62837 147 aa13.32□□□□□ -0.28
TRIM47-201ENST00000254816 RBX1P62877 108 aa13.32□□□□□ -0.28
TRIM47-201ENST00000254816 NOTCH1P46531 2555 aa13.32□□□□□ -0.28
TRIM47-201ENST00000254816 CEMP1Q6PRD7 247 aaPredicted RBP13.32□□□□□ -0.28
TRIM47-201ENST00000254816 SCGB1D4Q6XE38 83 aa13.32□□□□□ -0.28
TRIM47-201ENST00000254816 C12orf74Q32Q52 190 aa13.31□□□□□ -0.28
TRIM47-201ENST00000254816 TSPEAR-AS2P59090 65 aa13.3□□□□□ -0.28
TRIM47-201ENST00000254816 PAPPA-AS1Q5QFB9 102 aa13.3□□□□□ -0.28
TRIM47-201ENST00000254816 HERVK_113P61574 105 aa13.3□□□□□ -0.28
TRIM47-201ENST00000254816 RNF151Q2KHN1 245 aa13.3□□□□□ -0.28
TRIM47-201ENST00000254816 DAD1P61803 113 aa13.29□□□□□ -0.28
TRIM47-201ENST00000254816 OCIAD2Q56VL3 154 aa13.29□□□□□ -0.28
TRIM47-201ENST00000254816 NTM-AS1Q6ZSK4 140 aa13.29□□□□□ -0.28
TRIM47-201ENST00000254816 DAZ4Q86SG3 579 aaKnown RBP13.29□□□□□ -0.28
TRIM47-201ENST00000254816 DAZ3Q9NR90 486 aaKnown RBP13.29□□□□□ -0.28
TRIM47-201ENST00000254816 IGLL5B9A064 214 aa13.28□□□□□ -0.28
TRIM47-201ENST00000254816 IGLV4-3A0A075B6K6 122 aa13.27□□□□□ -0.28
TRIM47-201ENST00000254816 SPART-AS1P0CW21 52 aa13.27□□□□□ -0.29
TRIM47-201ENST00000254816 CRYBA4P53673 196 aa13.27□□□□□ -0.29
TRIM47-201ENST00000254816 RNASE13Q5GAN3 156 aaKnown RBP13.27□□□□□ -0.29
TRIM47-201ENST00000254816 FAM104AQ969W3 186 aa13.27□□□□□ -0.29
TRIM47-201ENST00000254816 UBE2D4Q9Y2X8 147 aa13.26□□□□□ -0.29
TRIM47-201ENST00000254816 NBEAL1Q6ZS30 2694 aa13.26□□□□□ -0.29
TRIM47-201ENST00000254816 IGHV3-64A0A075B6Q5 118 aa13.25□□□□□ -0.29
TRIM47-201ENST00000254816 SRSF9Q13242 221 aaKnown RBP eCLIP13.25□□□□□ -0.297e-6■□□□□ 8.2
TRIM47-201ENST00000254816 OR5A1Q8NGJ0 315 aa13.25□□□□□ -0.29
TRIM47-201ENST00000254816 CBY1Q9Y3M2 126 aa13.25□□□□□ -0.29
TRIM47-201ENST00000254816 GYPEP15421 78 aa13.25□□□□□ -0.29
TRIM47-201ENST00000254816 NFE4Q86UQ8 179 aa13.25□□□□□ -0.29
TRIM47-201ENST00000254816 A0A0J9YXV3 536 aa13.24□□□□□ -0.29
TRIM47-201ENST00000254816 LINC00694P0DN24 101 aa13.24□□□□□ -0.29
TRIM47-201ENST00000254816 VCX2Q9H322 139 aa13.24□□□□□ -0.29
TRIM47-201ENST00000254816 PRO0255Q9UI72 69 aa13.24□□□□□ -0.29
TRIM47-201ENST00000254816 PYGO1Q9Y3Y4 419 aa13.24□□□□□ -0.29
TRIM47-201ENST00000254816 A0A0J9YY99 117 aa13.24□□□□□ -0.29
TRIM47-201ENST00000254816 K7EIL1 84 aa13.23□□□□□ -0.29
TRIM47-201ENST00000254816 HTN3P15516 51 aa13.23□□□□□ -0.29
TRIM47-201ENST00000254816 SBSPONQ8IVN8 264 aa13.23□□□□□ -0.29
TRIM47-201ENST00000254816 J3QQQ9 107 aa13.23□□□□□ -0.29
TRIM47-201ENST00000254816 A0A096LPF7 62 aa13.22□□□□□ -0.29
TRIM47-201ENST00000254816 A0A1B0GWB2 263 aa13.22□□□□□ -0.29
TRIM47-201ENST00000254816 ZNF22P17026 224 aaPredicted RBP13.22□□□□□ -0.29
TRIM47-201ENST00000254816 AMELXQ99217 191 aa13.22□□□□□ -0.29
TRIM47-201ENST00000254816 TMEM223A0PJW6 202 aa13.22□□□□□ -0.29
TRIM47-201ENST00000254816 PAX4O43316 350 aa13.22□□□□□ -0.29
TRIM47-201ENST00000254816 ATP5G1P05496 136 aa13.22□□□□□ -0.29
TRIM47-201ENST00000254816 Q6ZUT4 128 aa13.22□□□□□ -0.29
TRIM47-201ENST00000254816 TENM3Q9P273 2699 aa13.21□□□□□ -0.29
TRIM47-201ENST00000254816 F5H768 121 aa13.21□□□□□ -0.29
TRIM47-201ENST00000254816 LGALS3P17931 250 aaKnown RBP13.21□□□□□ -0.29
TRIM47-201ENST00000254816 DEFB121Q5J5C9 76 aa13.21□□□□□ -0.29
TRIM47-201ENST00000254816 VSIG2Q96IQ7 327 aa13.21□□□□□ -0.29
TRIM47-201ENST00000254816 SPANXA1Q9NS26 97 aa13.21□□□□□ -0.29
TRIM47-201ENST00000254816 GTSF1LQ9H1H1 148 aa13.2□□□□□ -0.3
TRIM47-201ENST00000254816 MRAPQ8TCY5 172 aa13.19□□□□□ -0.3
TRIM47-201ENST00000254816 MGAM2Q2M2H8 2515 aa13.19□□□□□ -0.3
TRIM47-201ENST00000254816 TRAV26-1A0A087WT03 109 aa13.19□□□□□ -0.3
TRIM47-201ENST00000254816 DGAT2L7PQ6IED9 249 aa13.18□□□□□ -0.3
TRIM47-201ENST00000254816 ATP6V0E2Q8NHE4 81 aa13.18□□□□□ -0.3
TRIM47-201ENST00000254816 TMEM243Q9BU79 118 aa13.18□□□□□ -0.3
TRIM47-201ENST00000254816 PGPEP1Q9NXJ5 209 aa13.18□□□□□ -0.3
TRIM47-201ENST00000254816 LEPROTO15243 131 aa13.18□□□□□ -0.3
TRIM47-201ENST00000254816 TRBV6-8A0A0A6YYG3 113 aa13.17□□□□□ -0.3
TRIM47-201ENST00000254816 A0A0J9YWU9 116 aa13.17□□□□□ -0.3
TRIM47-201ENST00000254816 TMEM238LA0A1B0GVL6 79 aa13.17□□□□□ -0.3
TRIM47-201ENST00000254816 A6NJY4 79 aa13.17□□□□□ -0.3
TRIM47-201ENST00000254816 K7ERU9 68 aa13.17□□□□□ -0.3
TRIM47-201ENST00000254816 APOMO95445 188 aa13.17□□□□□ -0.3
TRIM47-201ENST00000254816 KPRPQ5T749 579 aaPredicted RBP13.17□□□□□ -0.3
TRIM47-201ENST00000254816 VPS25Q9BRG1 176 aa13.17□□□□□ -0.3
TRIM47-201ENST00000254816 H3BMG7 143 aa13.16□□□□□ -0.3
TRIM47-201ENST00000254816 UBE2L6O14933 153 aa13.16□□□□□ -0.3
TRIM47-201ENST00000254816 UBE2D1P51668 147 aa13.16□□□□□ -0.3
TRIM47-201ENST00000254816 SFTA2Q6UW10 78 aa13.16□□□□□ -0.3
TRIM47-201ENST00000254816 IGHV3-30P01768 117 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 153 ms