RNA–Protein interactions for RNA: ENST00000254325.8

RFX1-201, Transcript of regulatory factor X1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX1, Length 4,332 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-201ENST00000254325 DAZ3Q9NR90 486 aaKnown RBP11.41□□□□□ -0.58
RFX1-201ENST00000254325 PRO1854Q9UHT4 67 aa11.41□□□□□ -0.58
RFX1-201ENST00000254325 CITED1Q99966 193 aa11.4□□□□□ -0.58
RFX1-201ENST00000254325 PYGO1Q9Y3Y4 419 aa11.4□□□□□ -0.58
RFX1-201ENST00000254325 NFE4Q86UQ8 179 aa11.4□□□□□ -0.58
RFX1-201ENST00000254325 C16orf95Q9H693 158 aa11.4□□□□□ -0.58
RFX1-201ENST00000254325 TRBV10-1A0A0K0K1A3 114 aa11.39□□□□□ -0.59
RFX1-201ENST00000254325 NDUFA11Q86Y39 141 aa11.39□□□□□ -0.59
RFX1-201ENST00000254325 HERVK_113P63121 156 aa11.39□□□□□ -0.59
RFX1-201ENST00000254325 PRIMA1Q86XR5 153 aa11.39□□□□□ -0.59
RFX1-201ENST00000254325 HELZ2Q9BYK8 2649 aaKnown RBP11.39□□□□□ -0.59
RFX1-201ENST00000254325 A4D1N5 150 aa11.39□□□□□ -0.59
RFX1-201ENST00000254325 FHL3Q13643 280 aa11.39□□□□□ -0.59
RFX1-201ENST00000254325 MUSTN1Q8IVN3 82 aa11.38□□□□□ -0.59
RFX1-201ENST00000254325 SLC25A29Q8N8R3 303 aa11.38□□□□□ -0.59
RFX1-201ENST00000254325 C11orf72Q8NBR9 251 aa11.38□□□□□ -0.59
RFX1-201ENST00000254325 CRLF1O75462 422 aa11.38□□□□□ -0.59
RFX1-201ENST00000254325 IGLV1-51P01701 117 aa11.38□□□□□ -0.59
RFX1-201ENST00000254325 Q9UF83 564 aa11.38□□□□□ -0.59
RFX1-201ENST00000254325 COPS9Q8WXC6 57 aa11.37□□□□□ -0.59
RFX1-201ENST00000254325 IGHV1-58A0A0C4DH39 117 aa11.37□□□□□ -0.59
RFX1-201ENST00000254325 TSPEAR-AS2P59090 65 aa11.36□□□□□ -0.59
RFX1-201ENST00000254325 UBE2D4Q9Y2X8 147 aa11.36□□□□□ -0.59
RFX1-201ENST00000254325 CHD6Q8TD26 2715 aa11.36□□□□□ -0.59
RFX1-201ENST00000254325 F8W1H4 67 aa11.36□□□□□ -0.59
RFX1-201ENST00000254325 BEAN1Q3B7T3 259 aa11.36□□□□□ -0.59
RFX1-201ENST00000254325 C9orf66Q5T8R8 295 aa11.36□□□□□ -0.59
RFX1-201ENST00000254325 CRYBA4P53673 196 aa11.36□□□□□ -0.59
RFX1-201ENST00000254325 TINCRA0A1B0GVN0 87 aa11.35□□□□□ -0.59
RFX1-201ENST00000254325 NDUFA7O95182 113 aa11.35□□□□□ -0.59
RFX1-201ENST00000254325 A0A096LPF7 62 aa11.35□□□□□ -0.59
RFX1-201ENST00000254325 CDKN2A-AS1Q9UH64 79 aa11.35□□□□□ -0.59
RFX1-201ENST00000254325 VSIG2Q96IQ7 327 aa11.35□□□□□ -0.59
RFX1-201ENST00000254325 CHCHD7Q9BUK0 85 aa11.34□□□□□ -0.59
RFX1-201ENST00000254325 Q9H8V8 135 aa11.34□□□□□ -0.59
RFX1-201ENST00000254325 SVEP1Q4LDE5 3571 aa11.34□□□□□ -0.59
RFX1-201ENST00000254325 A0A0J9YXY3 114 aa11.34□□□□□ -0.59
RFX1-201ENST00000254325 WFDC2Q14508 124 aa11.34□□□□□ -0.59
RFX1-201ENST00000254325 C10orf126Q8N4M7 172 aa11.34□□□□□ -0.59
RFX1-201ENST00000254325 A8MZ25 164 aa11.33□□□□□ -0.6
RFX1-201ENST00000254325 CELSR2Q9HCU4 2923 aa11.33□□□□□ -0.6
RFX1-201ENST00000254325 TRAV26-1A0A087WT03 109 aa11.33□□□□□ -0.6
RFX1-201ENST00000254325 A8MTW9 85 aa11.33□□□□□ -0.6
RFX1-201ENST00000254325 SPANXB1Q9NS25 103 aaPredicted RBP11.32□□□□□ -0.6
RFX1-201ENST00000254325 TSPAN13O95857 204 aa11.32□□□□□ -0.6
RFX1-201ENST00000254325 CFC1BP0CG36 223 aa11.32□□□□□ -0.6
RFX1-201ENST00000254325 CFC1P0CG37 223 aa11.32□□□□□ -0.6
RFX1-201ENST00000254325 GAGE2BQ13066 116 aa11.32□□□□□ -0.6
RFX1-201ENST00000254325 GAGE2EQ4V326 116 aa11.32□□□□□ -0.6
RFX1-201ENST00000254325 PTH2Q96A98 100 aa11.32□□□□□ -0.6
RFX1-201ENST00000254325 GAGE2DQ9UEU5 116 aa11.32□□□□□ -0.6
RFX1-201ENST00000254325 TEX48A0A1B0GUV7 120 aa11.32□□□□□ -0.6
RFX1-201ENST00000254325 SH2D6Q7Z4S9 175 aa11.32□□□□□ -0.6
RFX1-201ENST00000254325 DAND5Q8N907 189 aa11.32□□□□□ -0.6
RFX1-201ENST00000254325 CELSR1Q9NYQ6 3014 aa11.32□□□□□ -0.6
RFX1-201ENST00000254325 TRBV20-1A0A075B6N2 111 aa11.31□□□□□ -0.6
RFX1-201ENST00000254325 GYPEP15421 78 aa11.31□□□□□ -0.6
RFX1-201ENST00000254325 MRPS36P82909 103 aaKnown RBP11.31□□□□□ -0.6
RFX1-201ENST00000254325 UFSP1Q6NVU6 142 aa11.31□□□□□ -0.6
RFX1-201ENST00000254325 C11orf68Q9H3H3 251 aaKnown RBP11.31□□□□□ -0.6
RFX1-201ENST00000254325 LOC100131303A0A0U1RQF7 123 aa11.31□□□□□ -0.6
RFX1-201ENST00000254325 DEFB4AO15263 64 aa11.31□□□□□ -0.6
RFX1-201ENST00000254325 APOC4P55056 127 aa11.31□□□□□ -0.6
RFX1-201ENST00000254325 IGHV3-30P01768 117 aa11.31□□□□□ -0.6
RFX1-201ENST00000254325 IGHV3-30-5P0DP03 117 aa11.31□□□□□ -0.6
RFX1-201ENST00000254325 DAD1P61803 113 aa11.31□□□□□ -0.6
RFX1-201ENST00000254325 DEFB135Q30KP9 77 aa11.31□□□□□ -0.6
RFX1-201ENST00000254325 GAGE12HA6NDE8 117 aa11.31□□□□□ -0.6
RFX1-201ENST00000254325 LINC00482Q8N8I6 264 aa11.31□□□□□ -0.6
RFX1-201ENST00000254325 LINC00158P58513 81 aa11.3□□□□□ -0.6
RFX1-201ENST00000254325 ZFAND6Q6FIF0 208 aa11.3□□□□□ -0.6
RFX1-201ENST00000254325 AMELXQ99217 191 aa11.3□□□□□ -0.6
RFX1-201ENST00000254325 C9JAW5 83 aa11.3□□□□□ -0.6
RFX1-201ENST00000254325 PAX4O43316 350 aa11.29□□□□□ -0.6
RFX1-201ENST00000254325 INSL3P51460 131 aa11.29□□□□□ -0.6
RFX1-201ENST00000254325 SS18L2Q9UHA2 77 aa11.29□□□□□ -0.6
RFX1-201ENST00000254325 KRTAP1-1Q07627 177 aa11.29□□□□□ -0.6
RFX1-201ENST00000254325 ATP6V0E2Q8NHE4 81 aa11.28□□□□□ -0.6
RFX1-201ENST00000254325 EDA2RQ9HAV5 297 aa11.28□□□□□ -0.6
RFX1-201ENST00000254325 F5H768 121 aa11.28□□□□□ -0.6
RFX1-201ENST00000254325 APCP25054 2843 aa11.28□□□□□ -0.6
RFX1-201ENST00000254325 UBE2D3P61077 147 aa11.28□□□□□ -0.6
RFX1-201ENST00000254325 UBE2D2P62837 147 aa11.28□□□□□ -0.6
RFX1-201ENST00000254325 UBR5O95071 2799 aaPredicted RBP11.27□□□□□ -0.6
RFX1-201ENST00000254325 TRBV6-4A0A1B0GX49 114 aa11.27□□□□□ -0.6
RFX1-201ENST00000254325 UBE2D1P51668 147 aa11.27□□□□□ -0.6
RFX1-201ENST00000254325 ATXN8Q156A1 80 aa11.27□□□□□ -0.6
RFX1-201ENST00000254325 CLPSL2Q6UWE3 100 aa11.27□□□□□ -0.6
RFX1-201ENST00000254325 LINC00694P0DN24 101 aa11.27□□□□□ -0.61
RFX1-201ENST00000254325 C6orf226Q5I0X4 101 aa11.27□□□□□ -0.61
RFX1-201ENST00000254325 SCGB1A1P11684 91 aa11.26□□□□□ -0.61
RFX1-201ENST00000254325 TIRAPP58753 221 aa11.26□□□□□ -0.61
RFX1-201ENST00000254325 SS18Q15532 418 aa11.26□□□□□ -0.61
RFX1-201ENST00000254325 OR13C6PQ8NH95 151 aa11.26□□□□□ -0.61
RFX1-201ENST00000254325 C5orf38Q86SI9 138 aa11.26□□□□□ -0.61
RFX1-201ENST00000254325 FAM110AQ9BQ89 295 aa11.25□□□□□ -0.61
RFX1-201ENST00000254325 UNC79Q9P2D8 2635 aa11.25□□□□□ -0.61
RFX1-201ENST00000254325 FAM222AQ5U5X8 452 aa11.24□□□□□ -0.61
RFX1-201ENST00000254325 MALP21145 153 aa11.24□□□□□ -0.61
RFX1-201ENST00000254325 MIAQ16674 131 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms