RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 MAP6D1Q9H9H5 199 aa8.22□□□□□ -1.09
COPA-201ENST00000241704 LOC107984640A0A0U1RRK4 108 aa8.22□□□□□ -1.09
COPA-201ENST00000241704 C11orf45Q8TAV5 145 aa8.22□□□□□ -1.09
COPA-201ENST00000241704 IGHV3-30-3P0DP02 117 aa8.21□□□□□ -1.09
COPA-201ENST00000241704 RPL39P62891 51 aaKnown RBP8.21□□□□□ -1.09
COPA-201ENST00000241704 TMEM263Q8WUH6 116 aaKnown RBP8.21□□□□□ -1.09
COPA-201ENST00000241704 hADV29S1A0JD25 119 aa8.21□□□□□ -1.1
COPA-201ENST00000241704 ODF3Q96PU9 254 aa8.21□□□□□ -1.1
COPA-201ENST00000241704 HECTD1Q9ULT8 2610 aa8.21□□□□□ -1.1
COPA-201ENST00000241704 RS1O15537 224 aa8.21□□□□□ -1.1
COPA-201ENST00000241704 TMEM258P61165 79 aa8.21□□□□□ -1.1
COPA-201ENST00000241704 SUMO4Q6EEV6 95 aa8.21□□□□□ -1.1
COPA-201ENST00000241704 RANBP2P49792 3224 aaKnown RBP8.2□□□□□ -1.1
COPA-201ENST00000241704 UBE2BP63146 152 aa8.2□□□□□ -1.1
COPA-201ENST00000241704 RNASE13Q5GAN3 156 aaKnown RBP8.2□□□□□ -1.1
COPA-201ENST00000241704 C10orf99Q6UWK7 81 aa8.2□□□□□ -1.1
COPA-201ENST00000241704 IGLV2-18A0A075B6J9 118 aa8.2□□□□□ -1.1
COPA-201ENST00000241704 DEFB114Q30KQ6 69 aa8.2□□□□□ -1.1
COPA-201ENST00000241704 LAMTOR3Q9UHA4 124 aa8.2□□□□□ -1.1
COPA-201ENST00000241704 K7EQD1 137 aa8.19□□□□□ -1.1
COPA-201ENST00000241704 A0A0J9YXV3 536 aa8.19□□□□□ -1.1
COPA-201ENST00000241704 H7C423 109 aa8.19□□□□□ -1.1
COPA-201ENST00000241704 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.19□□□□□ -1.1
COPA-201ENST00000241704 IGKV2-29A2NJV5 120 aaPredicted RBP8.19□□□□□ -1.1
COPA-201ENST00000241704 TNRC6BQ9UPQ9 1833 aaKnown RBP8.19□□□□□ -1.1
COPA-201ENST00000241704 IGLV10-54A0A075B6I4 117 aa8.19□□□□□ -1.1
COPA-201ENST00000241704 PSMG3-AS1Q96PY0 264 aa8.19□□□□□ -1.1
COPA-201ENST00000241704 K7EQG2 157 aa8.18□□□□□ -1.1
COPA-201ENST00000241704 CDK2AP2O75956 126 aa8.18□□□□□ -1.1
COPA-201ENST00000241704 A0A0J9YXY3 114 aa8.18□□□□□ -1.1
COPA-201ENST00000241704 TRBV7-7A0A0K0K1E9 115 aa8.18□□□□□ -1.1
COPA-201ENST00000241704 SOCS3O14543 225 aa8.18□□□□□ -1.1
COPA-201ENST00000241704 PSMB8P28062 276 aa8.18□□□□□ -1.1
COPA-201ENST00000241704 COX8CQ7Z4L0 72 aa8.18□□□□□ -1.1
COPA-201ENST00000241704 AVPP01185 164 aa8.17□□□□□ -1.1
COPA-201ENST00000241704 RBMY1FQ15415 496 aaKnown RBP8.17□□□□□ -1.1
COPA-201ENST00000241704 PRO0255Q9UI72 69 aa8.17□□□□□ -1.1
COPA-201ENST00000241704 C5orf38Q86SI9 138 aa8.17□□□□□ -1.1
COPA-201ENST00000241704 ZNF702PQ9H963 129 aa8.17□□□□□ -1.1
COPA-201ENST00000241704 IGKV3D-7A0A0C4DH55 119 aa8.17□□□□□ -1.1
COPA-201ENST00000241704 HIST2H2BDQ6DRA6 164 aa8.17□□□□□ -1.1
COPA-201ENST00000241704 LINC00482Q8N8I6 264 aa8.17□□□□□ -1.1
COPA-201ENST00000241704 CXCL5P42830 114 aa8.17□□□□□ -1.1
COPA-201ENST00000241704 PKIGQ9Y2B9 76 aa8.17□□□□□ -1.1
COPA-201ENST00000241704 LST1O00453 97 aa8.16□□□□□ -1.1
COPA-201ENST00000241704 DAZ2Q13117 558 aaKnown RBP8.16□□□□□ -1.1
COPA-201ENST00000241704 DAZ4Q86SG3 579 aaKnown RBP8.16□□□□□ -1.1
COPA-201ENST00000241704 DAZ3Q9NR90 486 aaKnown RBP8.16□□□□□ -1.1
COPA-201ENST00000241704 TMEM223A0PJW6 202 aa8.15□□□□□ -1.1
COPA-201ENST00000241704 IGLV1-40P01703 118 aa8.15□□□□□ -1.1
COPA-201ENST00000241704 MIAQ16674 131 aa8.15□□□□□ -1.1
COPA-201ENST00000241704 CAMK2N2Q96S95 79 aa8.15□□□□□ -1.1
COPA-201ENST00000241704 ZNF22P17026 224 aaPredicted RBP8.15□□□□□ -1.1
COPA-201ENST00000241704 C20orf173Q96LM9 149 aa8.15□□□□□ -1.1
COPA-201ENST00000241704 ANKRD17O75179 2603 aaKnown RBP8.15□□□□□ -1.11
COPA-201ENST00000241704 PRRC2CQ9Y520 2896 aaKnown RBP8.15□□□□□ -1.11
COPA-201ENST00000241704 FAM222AQ5U5X8 452 aa8.14□□□□□ -1.11
COPA-201ENST00000241704 IGHV4-4A0A075B6R2 117 aa8.14□□□□□ -1.11
COPA-201ENST00000241704 C5orf42Q9H799 3197 aa8.14□□□□□ -1.11
COPA-201ENST00000241704 HRCT1Q6UXD1 115 aa8.14□□□□□ -1.11
COPA-201ENST00000241704 KLK12Q9UKR0 248 aa8.14□□□□□ -1.11
COPA-201ENST00000241704 SERP2Q8N6R1 65 aa8.13□□□□□ -1.11
COPA-201ENST00000241704 VSIG2Q96IQ7 327 aa8.13□□□□□ -1.11
COPA-201ENST00000241704 DEFB131BA0A096LNP1 70 aa8.13□□□□□ -1.11
COPA-201ENST00000241704 RPL18AQ02543 176 aaKnown RBP8.13□□□□□ -1.11
COPA-201ENST00000241704 C11orf21Q9P2W6 132 aa8.13□□□□□ -1.11
COPA-201ENST00000241704 COX7A2LO14548 114 aa8.13□□□□□ -1.11
COPA-201ENST00000241704 RPS28P62857 69 aaKnown RBP8.13□□□□□ -1.11
COPA-201ENST00000241704 ZFAND2AQ8N6M9 145 aa8.13□□□□□ -1.11
COPA-201ENST00000241704 OXLD1Q5BKU9 147 aa8.12□□□□□ -1.11
COPA-201ENST00000241704 OPRPNQ99935 248 aaPredicted RBP8.12□□□□□ -1.11
COPA-201ENST00000241704 TSPEAR-AS2P59090 65 aa8.12□□□□□ -1.11
COPA-201ENST00000241704 IGLV4-69A0A075B6H9 119 aa8.12□□□□□ -1.11
COPA-201ENST00000241704 IGHV1-58A0A0C4DH39 117 aa8.12□□□□□ -1.11
COPA-201ENST00000241704 PRB2P02812 416 aaPredicted RBP8.12□□□□□ -1.11
COPA-201ENST00000241704 SDIM1Q6ZPB5 146 aa8.12□□□□□ -1.11
COPA-201ENST00000241704 PCSK5Q92824 1860 aa8.11□□□□□ -1.11
COPA-201ENST00000241704 TRAV13-2A0A0B4J235 113 aa8.11□□□□□ -1.11
COPA-201ENST00000241704 Q6ZTI0 123 aa8.11□□□□□ -1.11
COPA-201ENST00000241704 DAND5Q8N907 189 aa8.11□□□□□ -1.11
COPA-201ENST00000241704 TRANK1O15050 2925 aa8.1□□□□□ -1.11
COPA-201ENST00000241704 LYRM9A8MSI8 78 aa8.1□□□□□ -1.11
COPA-201ENST00000241704 MIFP14174 115 aa8.1□□□□□ -1.11
COPA-201ENST00000241704 C20orf203Q8NBC4 194 aa8.1□□□□□ -1.11
COPA-201ENST00000241704 DSCR8Q96T75 97 aa8.1□□□□□ -1.11
COPA-201ENST00000241704 IGIPA6NJ69 53 aa8.09□□□□□ -1.11
COPA-201ENST00000241704 UBL5Q9BZL1 73 aa8.09□□□□□ -1.11
COPA-201ENST00000241704 MKI67P46013 3256 aaKnown RBP8.09□□□□□ -1.11
COPA-201ENST00000241704 RAI1Q7Z5J4 1906 aaPredicted RBP8.09□□□□□ -1.11
COPA-201ENST00000241704 TRBV10-1A0A0K0K1A3 114 aa8.09□□□□□ -1.11
COPA-201ENST00000241704 BRI3O95415 125 aa8.09□□□□□ -1.11
COPA-201ENST00000241704 Q9H8V8 135 aa8.09□□□□□ -1.11
COPA-201ENST00000241704 TINCRA0A1B0GVN0 87 aa8.09□□□□□ -1.12
COPA-201ENST00000241704 PTPRBP23467 1997 aa8.08□□□□□ -1.12
COPA-201ENST00000241704 RBM3P98179 157 aaKnown RBP8.08□□□□□ -1.12
COPA-201ENST00000241704 C18orf65Q6ZTR6 163 aa8.08□□□□□ -1.12
COPA-201ENST00000241704 NDUFC2O95298 119 aa8.08□□□□□ -1.12
COPA-201ENST00000241704 CRYGAP11844 174 aa8.08□□□□□ -1.12
COPA-201ENST00000241704 TIRAPP58753 221 aa8.08□□□□□ -1.12
COPA-201ENST00000241704 FAM236DA0A1B0GTK5 79 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 112.7 ms