RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 UBE2D3P61077 147 aa11.55□□□□□ -0.56
UBE3D-201ENST00000237186 UBE2D2P62837 147 aa11.55□□□□□ -0.56
UBE3D-201ENST00000237186 RNF151Q2KHN1 245 aa11.55□□□□□ -0.56
UBE3D-201ENST00000237186 FAM19A3Q7Z5A8 133 aa11.55□□□□□ -0.56
UBE3D-201ENST00000237186 NOP10Q9NPE3 64 aaKnown RBP11.55□□□□□ -0.56
UBE3D-201ENST00000237186 H3BMG7 143 aa11.55□□□□□ -0.56
UBE3D-201ENST00000237186 APOMO95445 188 aa11.55□□□□□ -0.56
UBE3D-201ENST00000237186 WFDC10AQ9H1F0 79 aa11.55□□□□□ -0.56
UBE3D-201ENST00000237186 SETD2Q9BYW2 2564 aaPredicted RBP11.54□□□□□ -0.56
UBE3D-201ENST00000237186 TRAV8-3A0A0A6YYJ7 113 aa11.53□□□□□ -0.56
UBE3D-201ENST00000237186 RPL35AP18077 110 aaKnown RBP11.53□□□□□ -0.56
UBE3D-201ENST00000237186 DGAT2L7PQ6IED9 249 aa11.53□□□□□ -0.56
UBE3D-201ENST00000237186 SBSPONQ8IVN8 264 aa11.53□□□□□ -0.56
UBE3D-201ENST00000237186 PRO0461Q9UI25 63 aa11.53□□□□□ -0.56
UBE3D-201ENST00000237186 INAFM1C9JVW0 142 aa11.53□□□□□ -0.56
UBE3D-201ENST00000237186 KRTAP10-3P60369 221 aa11.53□□□□□ -0.56
UBE3D-201ENST00000237186 RPL24P83731 157 aaKnown RBP11.53□□□□□ -0.56
UBE3D-201ENST00000237186 GAGE13Q4V321 117 aa11.53□□□□□ -0.56
UBE3D-201ENST00000237186 NTM-AS1Q6ZSK4 140 aa11.53□□□□□ -0.56
UBE3D-201ENST00000237186 LITAFQ99732 161 aa11.53□□□□□ -0.56
UBE3D-201ENST00000237186 GEMIN7Q9H840 131 aaKnown RBP11.53□□□□□ -0.56
UBE3D-201ENST00000237186 PRO1854Q9UHT4 67 aa11.53□□□□□ -0.56
UBE3D-201ENST00000237186 LYRM7Q5U5X0 104 aa11.52□□□□□ -0.57
UBE3D-201ENST00000237186 GTSF1LQ9H1H1 148 aa11.52□□□□□ -0.57
UBE3D-201ENST00000237186 A0A0B4J2C4 111 aa11.51□□□□□ -0.57
UBE3D-201ENST00000237186 TRBV6-4A0A1B0GX49 114 aa11.51□□□□□ -0.57
UBE3D-201ENST00000237186 A4D1N5 150 aa11.51□□□□□ -0.57
UBE3D-201ENST00000237186 SMAGPQ0VAQ4 97 aa11.51□□□□□ -0.57
UBE3D-201ENST00000237186 MUSTN1Q8IVN3 82 aa11.51□□□□□ -0.57
UBE3D-201ENST00000237186 VPS25Q9BRG1 176 aa11.51□□□□□ -0.57
UBE3D-201ENST00000237186 NDUFA12Q9UI09 145 aa11.51□□□□□ -0.57
UBE3D-201ENST00000237186 WFDC2Q14508 124 aa11.51□□□□□ -0.57
UBE3D-201ENST00000237186 ZFAND6Q6FIF0 208 aa11.51□□□□□ -0.57
UBE3D-201ENST00000237186 LINC00482Q8N8I6 264 aa11.51□□□□□ -0.57
UBE3D-201ENST00000237186 SPINK8P0C7L1 97 aa11.5□□□□□ -0.57
UBE3D-201ENST00000237186 LINC00694P0DN24 101 aa11.5□□□□□ -0.57
UBE3D-201ENST00000237186 HERVK_113P63121 156 aa11.5□□□□□ -0.57
UBE3D-201ENST00000237186 SPANXDQ9BXN6 97 aa11.5□□□□□ -0.57
UBE3D-201ENST00000237186 SPANXCQ9NY87 97 aa11.5□□□□□ -0.57
UBE3D-201ENST00000237186 CDKN2A-AS1Q9UH64 79 aa11.5□□□□□ -0.57
UBE3D-201ENST00000237186 SETXQ7Z333 2677 aaKnown RBP11.49□□□□□ -0.57
UBE3D-201ENST00000237186 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.49□□□□□ -0.57
UBE3D-201ENST00000237186 NIPBLQ6KC79 2804 aaeCLIP11.49□□□□□ -0.57
UBE3D-201ENST00000237186 TRGV2A0A075B6R0 118 aa11.49□□□□□ -0.57
UBE3D-201ENST00000237186 TEX48A0A1B0GUV7 120 aa11.49□□□□□ -0.57
UBE3D-201ENST00000237186 GAGE12JA6NER3 117 aa11.49□□□□□ -0.57
UBE3D-201ENST00000237186 EIF4EBP3O60516 100 aaPredicted RBP11.49□□□□□ -0.57
UBE3D-201ENST00000237186 GAGE4Q13068 117 aa11.49□□□□□ -0.57
UBE3D-201ENST00000237186 GAGE5Q13069 117 aa11.49□□□□□ -0.57
UBE3D-201ENST00000237186 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.49□□□□□ -0.57
UBE3D-201ENST00000237186 TRBV20-1A0A075B6N2 111 aa11.48□□□□□ -0.57
UBE3D-201ENST00000237186 IGLV5-39A0A0G2JS06 123 aa11.48□□□□□ -0.57
UBE3D-201ENST00000237186 H7C423 109 aa11.48□□□□□ -0.57
UBE3D-201ENST00000237186 TIMM17BO60830 172 aa11.48□□□□□ -0.57
UBE3D-201ENST00000237186 GAGE7O76087 117 aa11.48□□□□□ -0.57
UBE3D-201ENST00000237186 IGHV3-33P01772 117 aa11.48□□□□□ -0.57
UBE3D-201ENST00000237186 GAGE12FP0CL80 117 aa11.48□□□□□ -0.57
UBE3D-201ENST00000237186 GAGE12GP0CL81 117 aa11.48□□□□□ -0.57
UBE3D-201ENST00000237186 GAGE12IP0CL82 117 aa11.48□□□□□ -0.57
UBE3D-201ENST00000237186 LINC00242Q5T6M2 205 aa11.48□□□□□ -0.57
UBE3D-201ENST00000237186 RNF183Q96D59 192 aa11.48□□□□□ -0.57
UBE3D-201ENST00000237186 CDC42SE2Q9NRR3 84 aa11.48□□□□□ -0.57
UBE3D-201ENST00000237186 LOC107984156A0A0G2JMH3 177 aa11.47□□□□□ -0.57
UBE3D-201ENST00000237186 COX6A2Q02221 97 aa11.47□□□□□ -0.57
UBE3D-201ENST00000237186 ARL17AQ8IVW1 177 aa11.47□□□□□ -0.57
UBE3D-201ENST00000237186 JMJD1CQ15652 2540 aa11.47□□□□□ -0.57
UBE3D-201ENST00000237186 PF4P02776 101 aa11.46□□□□□ -0.57
UBE3D-201ENST00000237186 TMEM101Q96IK0 257 aa11.46□□□□□ -0.57
UBE3D-201ENST00000237186 ADAMTSL4-AS1Q5T5F5 129 aa11.46□□□□□ -0.58
UBE3D-201ENST00000237186 HIVEP1P15822 2718 aa11.46□□□□□ -0.58
UBE3D-201ENST00000237186 A8MZ25 164 aa11.45□□□□□ -0.58
UBE3D-201ENST00000237186 NDUFA1O15239 70 aa11.45□□□□□ -0.58
UBE3D-201ENST00000237186 INSL3P51460 131 aa11.45□□□□□ -0.58
UBE3D-201ENST00000237186 FHL2Q14192 279 aa11.45□□□□□ -0.58
UBE3D-201ENST00000237186 MIAQ16674 131 aa11.45□□□□□ -0.58
UBE3D-201ENST00000237186 TMEM243Q9BU79 118 aa11.45□□□□□ -0.58
UBE3D-201ENST00000237186 NSD1Q96L73 2696 aaPredicted RBP11.45□□□□□ -0.58
UBE3D-201ENST00000237186 PCP4P48539 62 aa11.44□□□□□ -0.58
UBE3D-201ENST00000237186 PSMB2P49721 201 aa11.44□□□□□ -0.58
UBE3D-201ENST00000237186 ERG28Q9UKR5 140 aa11.44□□□□□ -0.58
UBE3D-201ENST00000237186 ETDBQ3ZM63 59 aa11.44□□□□□ -0.58
UBE3D-201ENST00000237186 LINC00612Q8N6U2 182 aa11.44□□□□□ -0.58
UBE3D-201ENST00000237186 TCL1BO95988 128 aa11.43□□□□□ -0.58
UBE3D-201ENST00000237186 IFITM1P13164 125 aa11.43□□□□□ -0.58
UBE3D-201ENST00000237186 KIR2DL5BQ8NHK3 375 aa11.43□□□□□ -0.58
UBE3D-201ENST00000237186 FN1P02751 2386 aaKnown RBP11.43□□□□□ -0.58
UBE3D-201ENST00000237186 TRGV4A0A0C4DH28 118 aa11.42□□□□□ -0.58
UBE3D-201ENST00000237186 CRLF1O75462 422 aa11.42□□□□□ -0.58
UBE3D-201ENST00000237186 SMCPP49901 116 aaPredicted RBP11.42□□□□□ -0.58
UBE3D-201ENST00000237186 SFTA2Q6UW10 78 aa11.42□□□□□ -0.58
UBE3D-201ENST00000237186 SH2D6Q7Z4S9 175 aa11.42□□□□□ -0.58
UBE3D-201ENST00000237186 J3QR89 54 aa11.42□□□□□ -0.58
UBE3D-201ENST00000237186 PRSS2P07478 247 aa11.42□□□□□ -0.58
UBE3D-201ENST00000237186 ATP6V0E2Q8NHE4 81 aa11.42□□□□□ -0.58
UBE3D-201ENST00000237186 LOC100131303A0A0U1RQF7 123 aa11.41□□□□□ -0.58
UBE3D-201ENST00000237186 SMIM1B2RUZ4 78 aa11.41□□□□□ -0.58
UBE3D-201ENST00000237186 UBE2L6O14933 153 aa11.41□□□□□ -0.58
UBE3D-201ENST00000237186 FLNBO75369 2602 aaKnown RBP11.4□□□□□ -0.58
UBE3D-201ENST00000237186 TRAV13-1A0A0B4J241 112 aa11.4□□□□□ -0.58
UBE3D-201ENST00000237186 SMIM9A6NGZ8 99 aa11.4□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms