RNA–Protein interactions for RNA: ENST00000233573.6

ITGA4-201, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best)

Gene ITGA4, Length 2,070 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-201ENST00000233573 FHL2Q14192 279 aa11.31□□□□□ -0.6
ITGA4-201ENST00000233573 CEND1Q8N111 149 aa11.31□□□□□ -0.6
ITGA4-201ENST00000233573 KIR2DL5BQ8NHK3 375 aa11.31□□□□□ -0.6
ITGA4-201ENST00000233573 DNAH3Q8TD57 4116 aa11.3□□□□□ -0.6
ITGA4-201ENST00000233573 GAGE12JA6NER3 117 aa11.3□□□□□ -0.6
ITGA4-201ENST00000233573 ZNF815PA8K554 130 aa11.3□□□□□ -0.6
ITGA4-201ENST00000233573 GCSHP23434 173 aa11.3□□□□□ -0.6
ITGA4-201ENST00000233573 GAGE4Q13068 117 aa11.3□□□□□ -0.6
ITGA4-201ENST00000233573 GAGE5Q13069 117 aa11.3□□□□□ -0.6
ITGA4-201ENST00000233573 GAGE13Q4V321 117 aa11.3□□□□□ -0.6
ITGA4-201ENST00000233573 RNASE13Q5GAN3 156 aaKnown RBP11.3□□□□□ -0.6
ITGA4-201ENST00000233573 Q6ZUT4 128 aa11.3□□□□□ -0.6
ITGA4-201ENST00000233573 SBSPONQ8IVN8 264 aa11.3□□□□□ -0.6
ITGA4-201ENST00000233573 SMIM9A6NGZ8 99 aa11.29□□□□□ -0.6
ITGA4-201ENST00000233573 H3BRM9 83 aa11.29□□□□□ -0.6
ITGA4-201ENST00000233573 KRTAP10-11P60412 298 aa11.29□□□□□ -0.6
ITGA4-201ENST00000233573 PLEKHB2Q96CS7 222 aa11.29□□□□□ -0.6
ITGA4-201ENST00000233573 LOC100131303A0A0U1RQF7 123 aa11.28□□□□□ -0.6
ITGA4-201ENST00000233573 LINC00694P0DN24 101 aa11.28□□□□□ -0.6
ITGA4-201ENST00000233573 GTSF1LQ9H1H1 148 aa11.28□□□□□ -0.6
ITGA4-201ENST00000233573 TRGV4A0A0C4DH28 118 aa11.27□□□□□ -0.61
ITGA4-201ENST00000233573 J3QQQ9 107 aa11.27□□□□□ -0.61
ITGA4-201ENST00000233573 LEPROTO15243 131 aa11.27□□□□□ -0.61
ITGA4-201ENST00000233573 CSDC2Q9Y534 153 aaKnown RBP11.27□□□□□ -0.61
ITGA4-201ENST00000233573 TINCRA0A1B0GVN0 87 aa11.26□□□□□ -0.61
ITGA4-201ENST00000233573 IGHV4-30-4P0DP06 118 aa11.26□□□□□ -0.61
ITGA4-201ENST00000233573 HIST1H4GQ99525 98 aa11.26□□□□□ -0.61
ITGA4-201ENST00000233573 A0A0J9YY99 117 aa11.25□□□□□ -0.61
ITGA4-201ENST00000233573 C9orf118A6NHY6 69 aa11.25□□□□□ -0.61
ITGA4-201ENST00000233573 UBE2D1P51668 147 aa11.25□□□□□ -0.61
ITGA4-201ENST00000233573 DEFB135Q30KP9 77 aa11.25□□□□□ -0.61
ITGA4-201ENST00000233573 G3V4G9 280 aa11.24□□□□□ -0.61
ITGA4-201ENST00000233573 APOC4P55056 127 aa11.24□□□□□ -0.61
ITGA4-201ENST00000233573 OR5A1Q8NGJ0 315 aa11.24□□□□□ -0.61
ITGA4-201ENST00000233573 DEFB130BP0DP73 79 aa11.24□□□□□ -0.61
ITGA4-201ENST00000233573 DEFB130AP0DP74 79 aa11.24□□□□□ -0.61
ITGA4-201ENST00000233573 VAMP3Q15836 100 aa11.24□□□□□ -0.61
ITGA4-201ENST00000233573 SCGB1D4Q6XE38 83 aa11.24□□□□□ -0.61
ITGA4-201ENST00000233573 SMIM13P0DJ93 91 aa11.23□□□□□ -0.61
ITGA4-201ENST00000233573 IGLV5-45A0A087WSX0 123 aa11.23□□□□□ -0.61
ITGA4-201ENST00000233573 LGALS3P17931 250 aaKnown RBP11.23□□□□□ -0.61
ITGA4-201ENST00000233573 FAM19A3Q7Z5A8 133 aa11.23□□□□□ -0.61
ITGA4-201ENST00000233573 NOTCH1P46531 2555 aa11.22□□□□□ -0.61
ITGA4-201ENST00000233573 K7ERJ3 54 aa11.22□□□□□ -0.61
ITGA4-201ENST00000233573 AMMECR1LQ6DCA0 310 aa11.22□□□□□ -0.61
ITGA4-201ENST00000233573 DGAT2L7PQ6IED9 249 aa11.22□□□□□ -0.61
ITGA4-201ENST00000233573 MDFIQ99750 246 aa11.22□□□□□ -0.61
ITGA4-201ENST00000233573 SPANXB1Q9NS25 103 aaPredicted RBP11.22□□□□□ -0.61
ITGA4-201ENST00000233573 IGHV3-64A0A075B6Q5 118 aa11.21□□□□□ -0.61
ITGA4-201ENST00000233573 IGHV3-30-3P0DP02 117 aa11.21□□□□□ -0.61
ITGA4-201ENST00000233573 TIRAPP58753 221 aa11.21□□□□□ -0.61
ITGA4-201ENST00000233573 EGFEM1PQ0D2K5 195 aa11.21□□□□□ -0.61
ITGA4-201ENST00000233573 RAB37Q96AX2 223 aa11.21□□□□□ -0.61
ITGA4-201ENST00000233573 TMEM243Q9BU79 118 aa11.21□□□□□ -0.61
ITGA4-201ENST00000233573 NHP2Q9NX24 153 aaKnown RBP11.21□□□□□ -0.61
ITGA4-201ENST00000233573 A0A1B0GWB2 263 aa11.21□□□□□ -0.62
ITGA4-201ENST00000233573 LYRM9A8MSI8 78 aa11.21□□□□□ -0.62
ITGA4-201ENST00000233573 CDC42SE2Q9NRR3 84 aa11.21□□□□□ -0.62
ITGA4-201ENST00000233573 TRAV8-3A0A0A6YYJ7 113 aa11.2□□□□□ -0.62
ITGA4-201ENST00000233573 IGHV1-58A0A0C4DH39 117 aa11.2□□□□□ -0.62
ITGA4-201ENST00000233573 H3BUT2 72 aa11.2□□□□□ -0.62
ITGA4-201ENST00000233573 H7C423 109 aa11.2□□□□□ -0.62
ITGA4-201ENST00000233573 FAM222AQ5U5X8 452 aa11.2□□□□□ -0.62
ITGA4-201ENST00000233573 C12orf74Q32Q52 190 aa11.2□□□□□ -0.62
ITGA4-201ENST00000233573 DEFB4AO15263 64 aa11.19□□□□□ -0.62
ITGA4-201ENST00000233573 LINC00242Q5T6M2 205 aa11.19□□□□□ -0.62
ITGA4-201ENST00000233573 VSIG2Q96IQ7 327 aa11.19□□□□□ -0.62
ITGA4-201ENST00000233573 NAA38Q9BRA0 125 aaKnown RBP11.19□□□□□ -0.62
ITGA4-201ENST00000233573 IGHV4-28A0A0C4DH34 117 aa11.18□□□□□ -0.62
ITGA4-201ENST00000233573 COX6A2Q02221 97 aa11.18□□□□□ -0.62
ITGA4-201ENST00000233573 SMAGPQ0VAQ4 97 aa11.18□□□□□ -0.62
ITGA4-201ENST00000233573 C10orf126Q8N4M7 172 aa11.18□□□□□ -0.62
ITGA4-201ENST00000233573 Q8NAQ8 132 aa11.18□□□□□ -0.62
ITGA4-201ENST00000233573 CDKN2A-AS1Q9UH64 79 aa11.18□□□□□ -0.62
ITGA4-201ENST00000233573 TRBV6-8A0A0A6YYG3 113 aa11.18□□□□□ -0.62
ITGA4-201ENST00000233573 SRSF9Q13242 221 aaKnown RBP eCLIP11.18□□□□□ -0.62
ITGA4-201ENST00000233573 GEMIN7Q9H840 131 aaKnown RBP11.18□□□□□ -0.62
ITGA4-201ENST00000233573 NBEAL1Q6ZS30 2694 aa11.18□□□□□ -0.62
ITGA4-201ENST00000233573 IGHV3-30P01768 117 aa11.17□□□□□ -0.62
ITGA4-201ENST00000233573 SPINK8P0C7L1 97 aa11.17□□□□□ -0.62
ITGA4-201ENST00000233573 IGHV3-30-5P0DP03 117 aa11.17□□□□□ -0.62
ITGA4-201ENST00000233573 A0A1W2PPM0 123 aa11.16□□□□□ -0.62
ITGA4-201ENST00000233573 RNF183Q96D59 192 aa11.16□□□□□ -0.62
ITGA4-201ENST00000233573 UBE2L6O14933 153 aa11.16□□□□□ -0.62
ITGA4-201ENST00000233573 MIFP14174 115 aa11.16□□□□□ -0.62
ITGA4-201ENST00000233573 HERVK_113P63121 156 aa11.16□□□□□ -0.62
ITGA4-201ENST00000233573 PRO0255Q9UI72 69 aa11.16□□□□□ -0.62
ITGA4-201ENST00000233573 GYPEP15421 78 aa11.15□□□□□ -0.62
ITGA4-201ENST00000233573 OCIAD2Q56VL3 154 aa11.15□□□□□ -0.62
ITGA4-201ENST00000233573 A0A0J9YXY3 114 aa11.15□□□□□ -0.63
ITGA4-201ENST00000233573 A8MZ25 164 aa11.15□□□□□ -0.63
ITGA4-201ENST00000233573 PRB2P02812 416 aaPredicted RBP11.15□□□□□ -0.63
ITGA4-201ENST00000233573 SAMD5Q5TGI4 173 aa11.15□□□□□ -0.63
ITGA4-201ENST00000233573 IGLL5B9A064 214 aa11.14□□□□□ -0.63
ITGA4-201ENST00000233573 RNF151Q2KHN1 245 aa11.14□□□□□ -0.63
ITGA4-201ENST00000233573 TMEM101Q96IK0 257 aa11.14□□□□□ -0.63
ITGA4-201ENST00000233573 TRAV13-1A0A0B4J241 112 aa11.13□□□□□ -0.63
ITGA4-201ENST00000233573 IGLV5-39A0A0G2JS06 123 aa11.13□□□□□ -0.63
ITGA4-201ENST00000233573 GAGE6Q13070 117 aa11.13□□□□□ -0.63
ITGA4-201ENST00000233573 ZFAND6Q6FIF0 208 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms