RNA–Protein interactions for RNA: ENST00000229328.9

PRKAB1-201, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAB1, Length 2,610 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-201ENST00000229328 H3BUT2 72 aa10.25□□□□□ -0.77
PRKAB1-201ENST00000229328 K7ERJ3 54 aa10.25□□□□□ -0.77
PRKAB1-201ENST00000229328 RPL36AP83881 106 aaKnown RBP10.25□□□□□ -0.77
PRKAB1-201ENST00000229328 CFAP161Q6P656 301 aa10.25□□□□□ -0.77
PRKAB1-201ENST00000229328 NTM-AS1Q6ZSK4 140 aa10.25□□□□□ -0.77
PRKAB1-201ENST00000229328 RPL36ALQ969Q0 106 aaKnown RBP10.25□□□□□ -0.77
PRKAB1-201ENST00000229328 SPANXA1Q9NS26 97 aa10.25□□□□□ -0.77
PRKAB1-201ENST00000229328 IGHV3-64A0A075B6Q5 118 aa10.25□□□□□ -0.77
PRKAB1-201ENST00000229328 TRBV10-1A0A0K0K1A3 114 aa10.25□□□□□ -0.77
PRKAB1-201ENST00000229328 LOC100131303A0A0U1RQF7 123 aa10.25□□□□□ -0.77
PRKAB1-201ENST00000229328 UBE2D3P61077 147 aa10.24□□□□□ -0.77
PRKAB1-201ENST00000229328 UBE2D2P62837 147 aa10.24□□□□□ -0.77
PRKAB1-201ENST00000229328 LINC00694P0DN24 101 aa10.24□□□□□ -0.77
PRKAB1-201ENST00000229328 SCGB1D4Q6XE38 83 aa10.24□□□□□ -0.77
PRKAB1-201ENST00000229328 NHP2Q9NX24 153 aaKnown RBP10.24□□□□□ -0.77
PRKAB1-201ENST00000229328 TAL2Q16559 108 aa10.23□□□□□ -0.77
PRKAB1-201ENST00000229328 J3QQQ9 107 aa10.23□□□□□ -0.77
PRKAB1-201ENST00000229328 SMIM13P0DJ93 91 aa10.23□□□□□ -0.77
PRKAB1-201ENST00000229328 CRYBA4P53673 196 aa10.23□□□□□ -0.77
PRKAB1-201ENST00000229328 MRPS36P82909 103 aaKnown RBP10.23□□□□□ -0.77
PRKAB1-201ENST00000229328 OR5A1Q8NGJ0 315 aa10.23□□□□□ -0.77
PRKAB1-201ENST00000229328 X6R8D5 127 aa10.22□□□□□ -0.77
PRKAB1-201ENST00000229328 RPL24P83731 157 aaKnown RBP10.22□□□□□ -0.77
PRKAB1-201ENST00000229328 FHL2Q14192 279 aa10.21□□□□□ -0.77
PRKAB1-201ENST00000229328 DAZ4Q86SG3 579 aaKnown RBP10.21□□□□□ -0.77
PRKAB1-201ENST00000229328 DAZ3Q9NR90 486 aaKnown RBP10.21□□□□□ -0.77
PRKAB1-201ENST00000229328 SPCS1Q9Y6A9 102 aa10.21□□□□□ -0.77
PRKAB1-201ENST00000229328 TRAV26-1A0A087WT03 109 aa10.21□□□□□ -0.78
PRKAB1-201ENST00000229328 TRGV4A0A0C4DH28 118 aa10.21□□□□□ -0.78
PRKAB1-201ENST00000229328 A0A0J9YY99 117 aa10.21□□□□□ -0.78
PRKAB1-201ENST00000229328 TEX48A0A1B0GUV7 120 aa10.21□□□□□ -0.78
PRKAB1-201ENST00000229328 LEPROTO15243 131 aa10.21□□□□□ -0.78
PRKAB1-201ENST00000229328 DEFB130BP0DP73 79 aa10.21□□□□□ -0.78
PRKAB1-201ENST00000229328 DEFB130AP0DP74 79 aa10.21□□□□□ -0.78
PRKAB1-201ENST00000229328 CKS1BP61024 79 aa10.21□□□□□ -0.78
PRKAB1-201ENST00000229328 TRBV6-4A0A1B0GX49 114 aa10.2□□□□□ -0.78
PRKAB1-201ENST00000229328 LGALS3P17931 250 aaKnown RBP10.2□□□□□ -0.78
PRKAB1-201ENST00000229328 SBSPONQ8IVN8 264 aa10.2□□□□□ -0.78
PRKAB1-201ENST00000229328 A6NJY4 79 aa10.2□□□□□ -0.78
PRKAB1-201ENST00000229328 TRAV8-3A0A0A6YYJ7 113 aa10.19□□□□□ -0.78
PRKAB1-201ENST00000229328 TINCRA0A1B0GVN0 87 aa10.19□□□□□ -0.78
PRKAB1-201ENST00000229328 A0A1W2PPM0 123 aa10.19□□□□□ -0.78
PRKAB1-201ENST00000229328 UBE2D1P51668 147 aa10.19□□□□□ -0.78
PRKAB1-201ENST00000229328 DGAT2L7PQ6IED9 249 aa10.19□□□□□ -0.78
PRKAB1-201ENST00000229328 TIMM21Q9BVV7 248 aa10.19□□□□□ -0.78
PRKAB1-201ENST00000229328 GAGE12HA6NDE8 117 aa10.18□□□□□ -0.78
PRKAB1-201ENST00000229328 C12orf74Q32Q52 190 aa10.18□□□□□ -0.78
PRKAB1-201ENST00000229328 CYSRT1A8MQ03 144 aa10.18□□□□□ -0.78
PRKAB1-201ENST00000229328 IGHV3-30-3P0DP02 117 aa10.18□□□□□ -0.78
PRKAB1-201ENST00000229328 SRSF9Q13242 221 aaKnown RBP eCLIP10.18□□□□□ -0.78
PRKAB1-201ENST00000229328 DEFB135Q30KP9 77 aa10.18□□□□□ -0.78
PRKAB1-201ENST00000229328 WFDC9Q8NEX5 89 aa10.18□□□□□ -0.78
PRKAB1-201ENST00000229328 BAHCC1Q9P281 2608 aa10.17□□□□□ -0.78
PRKAB1-201ENST00000229328 LINC00612Q8N6U2 182 aa10.17□□□□□ -0.78
PRKAB1-201ENST00000229328 KIR2DL5BQ8NHK3 375 aa10.17□□□□□ -0.78
PRKAB1-201ENST00000229328 A8MZ25 164 aa10.17□□□□□ -0.78
PRKAB1-201ENST00000229328 SPINK8P0C7L1 97 aa10.16□□□□□ -0.78
PRKAB1-201ENST00000229328 FABP2P12104 132 aa10.16□□□□□ -0.78
PRKAB1-201ENST00000229328 COX6A2Q02221 97 aa10.16□□□□□ -0.78
PRKAB1-201ENST00000229328 DEFB4AO15263 64 aa10.16□□□□□ -0.78
PRKAB1-201ENST00000229328 SAMD5Q5TGI4 173 aa10.16□□□□□ -0.78
PRKAB1-201ENST00000229328 C10orf126Q8N4M7 172 aa10.16□□□□□ -0.78
PRKAB1-201ENST00000229328 CDKN2A-AS1Q9UH64 79 aa10.16□□□□□ -0.78
PRKAB1-201ENST00000229328 IGHV1-58A0A0C4DH39 117 aa10.15□□□□□ -0.79
PRKAB1-201ENST00000229328 A0A1B0GWB2 263 aa10.15□□□□□ -0.79
PRKAB1-201ENST00000229328 GEMIN7Q9H840 131 aaKnown RBP10.15□□□□□ -0.79
PRKAB1-201ENST00000229328 SMIM9A6NGZ8 99 aa10.14□□□□□ -0.79
PRKAB1-201ENST00000229328 TMEM243Q9BU79 118 aa10.14□□□□□ -0.79
PRKAB1-201ENST00000229328 CDC42SE2Q9NRR3 84 aa10.14□□□□□ -0.79
PRKAB1-201ENST00000229328 CSDC2Q9Y534 153 aaKnown RBP10.14□□□□□ -0.79
PRKAB1-201ENST00000229328 FBN1P35555 2871 aaKnown RBP10.14□□□□□ -0.79
PRKAB1-201ENST00000229328 IGLL5B9A064 214 aa10.14□□□□□ -0.79
PRKAB1-201ENST00000229328 IGHV3-30P01768 117 aa10.14□□□□□ -0.79
PRKAB1-201ENST00000229328 IGHV3-30-5P0DP03 117 aa10.14□□□□□ -0.79
PRKAB1-201ENST00000229328 LINC00242Q5T6M2 205 aa10.14□□□□□ -0.79
PRKAB1-201ENST00000229328 FAM222AQ5U5X8 452 aa10.14□□□□□ -0.79
PRKAB1-201ENST00000229328 VSIG2Q96IQ7 327 aa10.14□□□□□ -0.79
PRKAB1-201ENST00000229328 SPATA25Q9BR10 227 aa10.14□□□□□ -0.79
PRKAB1-201ENST00000229328 SPANXB1Q9NS25 103 aaPredicted RBP10.14□□□□□ -0.79
PRKAB1-201ENST00000229328 TIRAPP58753 221 aa10.13□□□□□ -0.79
PRKAB1-201ENST00000229328 KRTAP24-1Q3LI83 254 aa10.13□□□□□ -0.79
PRKAB1-201ENST00000229328 TRAV13-1A0A0B4J241 112 aa10.12□□□□□ -0.79
PRKAB1-201ENST00000229328 J3QR89 54 aa10.12□□□□□ -0.79
PRKAB1-201ENST00000229328 UBE2L6O14933 153 aa10.12□□□□□ -0.79
PRKAB1-201ENST00000229328 APOC4P55056 127 aa10.12□□□□□ -0.79
PRKAB1-201ENST00000229328 IGLV5-45A0A087WSX0 123 aa10.12□□□□□ -0.79
PRKAB1-201ENST00000229328 A0A0J9YXY3 114 aa10.12□□□□□ -0.79
PRKAB1-201ENST00000229328 WIPF1O43516 503 aa10.12□□□□□ -0.79
PRKAB1-201ENST00000229328 IGHV4-28A0A0C4DH34 117 aa10.11□□□□□ -0.79
PRKAB1-201ENST00000229328 GAGE6Q13070 117 aa10.11□□□□□ -0.79
PRKAB1-201ENST00000229328 TRBV6-8A0A0A6YYG3 113 aa10.11□□□□□ -0.79
PRKAB1-201ENST00000229328 IGHV4-30-4P0DP06 118 aa10.11□□□□□ -0.79
PRKAB1-201ENST00000229328 GYPEP15421 78 aa10.1□□□□□ -0.79
PRKAB1-201ENST00000229328 CMYA5Q8N3K9 4069 aa10.1□□□□□ -0.79
PRKAB1-201ENST00000229328 OXLD1Q5BKU9 147 aa10.1□□□□□ -0.79
PRKAB1-201ENST00000229328 TMEM101Q96IK0 257 aa10.1□□□□□ -0.79
PRKAB1-201ENST00000229328 NDUFA12Q9UI09 145 aa10.1□□□□□ -0.79
PRKAB1-201ENST00000229328 APOMO95445 188 aa10.09□□□□□ -0.79
PRKAB1-201ENST00000229328 HERVK_113P63121 156 aa10.09□□□□□ -0.79
PRKAB1-201ENST00000229328 FAM19A3Q7Z5A8 133 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms