RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 DIRC1Q969H9 104 aa8.58□□□□□ -1.04
NOD1-201ENST00000222823 A0A0B4J2C4 111 aa8.58□□□□□ -1.04
NOD1-201ENST00000222823 IGKV3D-7A0A0C4DH55 119 aa8.58□□□□□ -1.04
NOD1-201ENST00000222823 M0QY20 66 aa8.58□□□□□ -1.04
NOD1-201ENST00000222823 NFE4Q86UQ8 179 aa8.58□□□□□ -1.04
NOD1-201ENST00000222823 LINC00269Q8N2A0 174 aa8.58□□□□□ -1.04
NOD1-201ENST00000222823 PTH2Q96A98 100 aa8.58□□□□□ -1.04
NOD1-201ENST00000222823 CDSNQ15517 529 aa8.58□□□□□ -1.04
NOD1-201ENST00000222823 Q8N976 141 aa8.58□□□□□ -1.04
NOD1-201ENST00000222823 IGLV4-3A0A075B6K6 122 aa8.57□□□□□ -1.04
NOD1-201ENST00000222823 NREPQ16612 68 aa8.57□□□□□ -1.04
NOD1-201ENST00000222823 C11orf45Q8TAV5 145 aa8.57□□□□□ -1.04
NOD1-201ENST00000222823 PSMG3-AS1Q96PY0 264 aa8.57□□□□□ -1.04
NOD1-201ENST00000222823 LYRM9A8MSI8 78 aa8.56□□□□□ -1.04
NOD1-201ENST00000222823 B5MCH6 92 aa8.56□□□□□ -1.04
NOD1-201ENST00000222823 ZNF22P17026 224 aaPredicted RBP8.56□□□□□ -1.04
NOD1-201ENST00000222823 RNF185Q96GF1 192 aa8.56□□□□□ -1.04
NOD1-201ENST00000222823 SPANXCQ9NY87 97 aa8.56□□□□□ -1.04
NOD1-201ENST00000222823 REG3AQ06141 175 aa8.56□□□□□ -1.04
NOD1-201ENST00000222823 H3BQ85 93 aa8.56□□□□□ -1.04
NOD1-201ENST00000222823 U3KQK5 164 aa8.55□□□□□ -1.04
NOD1-201ENST00000222823 NDUFS5O43920 106 aa8.55□□□□□ -1.04
NOD1-201ENST00000222823 MRGPRG-AS1Q2M3A8 158 aa8.55□□□□□ -1.04
NOD1-201ENST00000222823 CFAP126Q5VTH2 177 aa8.55□□□□□ -1.04
NOD1-201ENST00000222823 Q6ZS46 218 aa8.55□□□□□ -1.04
NOD1-201ENST00000222823 TRBV27A0A0K0K1C4 114 aa8.55□□□□□ -1.04
NOD1-201ENST00000222823 RBM3P98179 157 aaKnown RBP8.55□□□□□ -1.04
NOD1-201ENST00000222823 HIST2H2BDQ6DRA6 164 aa8.55□□□□□ -1.04
NOD1-201ENST00000222823 TP73-AS1Q9UF72 201 aa8.55□□□□□ -1.04
NOD1-201ENST00000222823 IGKV2D-26A0A0A0MRZ7 120 aa8.54□□□□□ -1.04
NOD1-201ENST00000222823 HIGD2BQ4VC39 106 aa8.54□□□□□ -1.04
NOD1-201ENST00000222823 UFSP1Q6NVU6 142 aa8.54□□□□□ -1.04
NOD1-201ENST00000222823 LINC00482Q8N8I6 264 aa8.54□□□□□ -1.04
NOD1-201ENST00000222823 LINC01006Q8NI28 216 aa8.54□□□□□ -1.04
NOD1-201ENST00000222823 ZNF702PQ9H963 129 aa8.54□□□□□ -1.04
NOD1-201ENST00000222823 C11orf21Q9P2W6 132 aa8.54□□□□□ -1.04
NOD1-201ENST00000222823 KLK5Q9Y337 293 aaPredicted RBP8.54□□□□□ -1.04
NOD1-201ENST00000222823 MRPS12O15235 138 aaKnown RBP8.54□□□□□ -1.04
NOD1-201ENST00000222823 RNASE3P12724 160 aaKnown RBP8.54□□□□□ -1.04
NOD1-201ENST00000222823 PROK1P58294 105 aa8.54□□□□□ -1.04
NOD1-201ENST00000222823 TMEM256-PLSCR3K7ERE1 68 aa8.54□□□□□ -1.04
NOD1-201ENST00000222823 UBE2AP49459 152 aa8.54□□□□□ -1.04
NOD1-201ENST00000222823 URB1-AS1Q96HZ7 61 aa8.53□□□□□ -1.04
NOD1-201ENST00000222823 TCL1BO95988 128 aa8.53□□□□□ -1.04
NOD1-201ENST00000222823 CHCHD10Q8WYQ3 142 aaPredicted RBP8.53□□□□□ -1.04
NOD1-201ENST00000222823 EPG5Q9HCE0 2579 aa8.53□□□□□ -1.04
NOD1-201ENST00000222823 TRBV6-5A0A0K0K1A5 114 aa8.53□□□□□ -1.04
NOD1-201ENST00000222823 FAM236AA0A1B0GUQ0 79 aa8.53□□□□□ -1.04
NOD1-201ENST00000222823 FAM236BA0A1B0GV22 79 aa8.53□□□□□ -1.04
NOD1-201ENST00000222823 TRBV6-4A0A1B0GX49 114 aa8.53□□□□□ -1.04
NOD1-201ENST00000222823 A0A1B0GX51 115 aa8.53□□□□□ -1.04
NOD1-201ENST00000222823 TRBV6-8A0A0A6YYG3 113 aa8.52□□□□□ -1.04
NOD1-201ENST00000222823 NDUFB1O75438 58 aa8.52□□□□□ -1.05
NOD1-201ENST00000222823 IGLV1-40P01703 118 aa8.52□□□□□ -1.05
NOD1-201ENST00000222823 PRR9Q5T870 116 aa8.52□□□□□ -1.05
NOD1-201ENST00000222823 MAPKAPK5-AS1Q8N8E1 139 aa8.52□□□□□ -1.05
NOD1-201ENST00000222823 ACANP16112 2415 aa8.52□□□□□ -1.05
NOD1-201ENST00000222823 KLLNB2CW77 178 aa8.52□□□□□ -1.05
NOD1-201ENST00000222823 DEFB131BA0A096LNP1 70 aa8.51□□□□□ -1.05
NOD1-201ENST00000222823 TMEM223A0PJW6 202 aa8.51□□□□□ -1.05
NOD1-201ENST00000222823 ATOX1O00244 68 aa8.51□□□□□ -1.05
NOD1-201ENST00000222823 VCANP13611 3396 aa8.51□□□□□ -1.05
NOD1-201ENST00000222823 H7C423 109 aa8.51□□□□□ -1.05
NOD1-201ENST00000222823 IGKV2-24A0A0C4DH68 120 aa8.51□□□□□ -1.05
NOD1-201ENST00000222823 AVPP01185 164 aa8.51□□□□□ -1.05
NOD1-201ENST00000222823 MIFP14174 115 aa8.51□□□□□ -1.05
NOD1-201ENST00000222823 COX7BP24311 80 aa8.51□□□□□ -1.05
NOD1-201ENST00000222823 NRACQ8N912 160 aa8.5□□□□□ -1.05
NOD1-201ENST00000222823 PYGO1Q9Y3Y4 419 aa8.5□□□□□ -1.05
NOD1-201ENST00000222823 G3V4G9 280 aa8.5□□□□□ -1.05
NOD1-201ENST00000222823 SZT2Q5T011 3432 aa8.49□□□□□ -1.05
NOD1-201ENST00000222823 IBA57-AS1B1ANH7 110 aa8.49□□□□□ -1.05
NOD1-201ENST00000222823 PDE6GP18545 87 aa8.49□□□□□ -1.05
NOD1-201ENST00000222823 DCANP1Q8TF63 244 aa8.49□□□□□ -1.05
NOD1-201ENST00000222823 SPEGQ15772 3267 aa8.49□□□□□ -1.05
NOD1-201ENST00000222823 POLR2KP53803 58 aaKnown RBP8.49□□□□□ -1.05
NOD1-201ENST00000222823 C18orf65Q6ZTR6 163 aa8.49□□□□□ -1.05
NOD1-201ENST00000222823 LINC00308Q8TCZ7 52 aa8.49□□□□□ -1.05
NOD1-201ENST00000222823 C14orf132Q9NPU4 83 aa8.49□□□□□ -1.05
NOD1-201ENST00000222823 CRYGDP07320 174 aa8.48□□□□□ -1.05
NOD1-201ENST00000222823 CFAP54Q96N23 3096 aa8.48□□□□□ -1.05
NOD1-201ENST00000222823 LY6G6DO95868 133 aa8.48□□□□□ -1.05
NOD1-201ENST00000222823 RBX1P62877 108 aa8.48□□□□□ -1.05
NOD1-201ENST00000222823 PIK3CD-AS1Q5SR53 167 aa8.48□□□□□ -1.05
NOD1-201ENST00000222823 SHISA2Q6UWI4 295 aa8.48□□□□□ -1.05
NOD1-201ENST00000222823 FAM110AQ9BQ89 295 aa8.48□□□□□ -1.05
NOD1-201ENST00000222823 SPANXB1Q9NS25 103 aaPredicted RBP8.48□□□□□ -1.05
NOD1-201ENST00000222823 CNFNQ9BYD5 112 aa8.48□□□□□ -1.05
NOD1-201ENST00000222823 WFDC10AQ9H1F0 79 aa8.48□□□□□ -1.05
NOD1-201ENST00000222823 COX8CQ7Z4L0 72 aa8.48□□□□□ -1.05
NOD1-201ENST00000222823 BBC3Q96PG8 261 aaPredicted RBP8.48□□□□□ -1.05
NOD1-201ENST00000222823 PRM2P04554 102 aa8.47□□□□□ -1.05
NOD1-201ENST00000222823 GAS8-AS1O95177 125 aa8.47□□□□□ -1.05
NOD1-201ENST00000222823 HILS1P60008 231 aa8.47□□□□□ -1.05
NOD1-201ENST00000222823 LINC00643Q86TS7 51 aa8.47□□□□□ -1.05
NOD1-201ENST00000222823 HIGD2AQ9BW72 106 aa8.47□□□□□ -1.05
NOD1-201ENST00000222823 TSHBP01222 138 aa8.47□□□□□ -1.05
NOD1-201ENST00000222823 XAGE1AQ9HD64 81 aa8.47□□□□□ -1.05
NOD1-201ENST00000222823 MP68P56378 58 aa8.46□□□□□ -1.05
NOD1-201ENST00000222823 TMEM258P61165 79 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms