RNA–Protein interactions for RNA: ENST00000217315.9

TM9SF4-201, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2 BASIC

Gene TM9SF4, Length 4,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-201ENST00000217315 HECTD1Q9ULT8 2610 aa9.05□□□□□ -0.96
TM9SF4-201ENST00000217315 XCL1P47992 114 aa9.05□□□□□ -0.96
TM9SF4-201ENST00000217315 TEN1Q86WV5 123 aa9.05□□□□□ -0.96
TM9SF4-201ENST00000217315 FLNAP21333 2647 aaKnown RBP9.05□□□□□ -0.96
TM9SF4-201ENST00000217315 NXPH4O95158 308 aa9.05□□□□□ -0.96
TM9SF4-201ENST00000217315 UFSP1Q6NVU6 142 aa9.05□□□□□ -0.96
TM9SF4-201ENST00000217315 FLNCQ14315 2725 aa9.05□□□□□ -0.96
TM9SF4-201ENST00000217315 IGLV4-69A0A075B6H9 119 aa9.04□□□□□ -0.96
TM9SF4-201ENST00000217315 DAD1P61803 113 aa9.04□□□□□ -0.96
TM9SF4-201ENST00000217315 CARD19Q96LW7 228 aa9.04□□□□□ -0.96
TM9SF4-201ENST00000217315 CFAP46Q8IYW2 2715 aa9.04□□□□□ -0.96
TM9SF4-201ENST00000217315 ZFAND6Q6FIF0 208 aa9.04□□□□□ -0.96
TM9SF4-201ENST00000217315 NFE4Q86UQ8 179 aa9.04□□□□□ -0.96
TM9SF4-201ENST00000217315 FOXI1Q12951 378 aa9.04□□□□□ -0.96
TM9SF4-201ENST00000217315 KLK9Q2XQG4 91 aa9.04□□□□□ -0.96
TM9SF4-201ENST00000217315 ANAPC13Q9BS18 74 aa9.04□□□□□ -0.96
TM9SF4-201ENST00000217315 TRBV10-1A0A0K0K1A3 114 aa9.03□□□□□ -0.96
TM9SF4-201ENST00000217315 ANKRD29Q8N6D5 301 aa9.03□□□□□ -0.96
TM9SF4-201ENST00000217315 GYPEP15421 78 aa9.03□□□□□ -0.96
TM9SF4-201ENST00000217315 LINC00315P59091 139 aa9.03□□□□□ -0.96
TM9SF4-201ENST00000217315 ODF3L2Q3SX64 289 aa9.03□□□□□ -0.96
TM9SF4-201ENST00000217315 LINC01620Q4KN68 170 aa9.03□□□□□ -0.96
TM9SF4-201ENST00000217315 LINC01006Q8NI28 216 aa9.03□□□□□ -0.96
TM9SF4-201ENST00000217315 ZNF580Q9UK33 172 aa9.03□□□□□ -0.96
TM9SF4-201ENST00000217315 TINCRA0A1B0GVN0 87 aa9.03□□□□□ -0.96
TM9SF4-201ENST00000217315 DEFB4AO15263 64 aa9.03□□□□□ -0.96
TM9SF4-201ENST00000217315 SPANXB1Q9NS25 103 aaPredicted RBP9.03□□□□□ -0.96
TM9SF4-201ENST00000217315 IFITM1P13164 125 aa9.02□□□□□ -0.96
TM9SF4-201ENST00000217315 TSPEAR-AS2P59090 65 aa9.02□□□□□ -0.96
TM9SF4-201ENST00000217315 ICOSQ9Y6W8 199 aa9.02□□□□□ -0.96
TM9SF4-201ENST00000217315 CRLF1O75462 422 aa9.02□□□□□ -0.97
TM9SF4-201ENST00000217315 IGHV3-30P01768 117 aa9.02□□□□□ -0.97
TM9SF4-201ENST00000217315 IGHV3-30-5P0DP03 117 aa9.02□□□□□ -0.97
TM9SF4-201ENST00000217315 FAM19A4Q96LR4 140 aa9.02□□□□□ -0.97
TM9SF4-201ENST00000217315 DCHS1Q96JQ0 3298 aa9.02□□□□□ -0.97
TM9SF4-201ENST00000217315 LINC01546A6NGU7 62 aa9.02□□□□□ -0.97
TM9SF4-201ENST00000217315 PYGO1Q9Y3Y4 419 aa9.02□□□□□ -0.97
TM9SF4-201ENST00000217315 FLNBO75369 2602 aaKnown RBP9.02□□□□□ -0.97
TM9SF4-201ENST00000217315 TRAV4A0A0B4J268 109 aa9.02□□□□□ -0.97
TM9SF4-201ENST00000217315 ANGP03950 147 aaKnown RBP9.02□□□□□ -0.97
TM9SF4-201ENST00000217315 MUC4Q99102 2169 aa9.01□□□□□ -0.97
TM9SF4-201ENST00000217315 ATP6V0E2Q8NHE4 81 aa9.01□□□□□ -0.97
TM9SF4-201ENST00000217315 CLEC2BQ92478 149 aa9.01□□□□□ -0.97
TM9SF4-201ENST00000217315 LAMA5O15230 3695 aa9.01□□□□□ -0.97
TM9SF4-201ENST00000217315 ITPR3Q14573 2671 aa9□□□□□ -0.97
TM9SF4-201ENST00000217315 S100A7L2Q5SY68 101 aa9□□□□□ -0.97
TM9SF4-201ENST00000217315 RS1O15537 224 aa9□□□□□ -0.97
TM9SF4-201ENST00000217315 MIAQ16674 131 aa9□□□□□ -0.97
TM9SF4-201ENST00000217315 IGLV10-54A0A075B6I4 117 aa8.99□□□□□ -0.97
TM9SF4-201ENST00000217315 IGHV3-33P01772 117 aa8.99□□□□□ -0.97
TM9SF4-201ENST00000217315 RBMY1FQ15415 496 aaKnown RBP8.99□□□□□ -0.97
TM9SF4-201ENST00000217315 UBE2D4Q9Y2X8 147 aa8.99□□□□□ -0.97
TM9SF4-201ENST00000217315 DEFB135Q30KP9 77 aa8.99□□□□□ -0.97
TM9SF4-201ENST00000217315 CRYBA4P53673 196 aa8.99□□□□□ -0.97
TM9SF4-201ENST00000217315 Q6ZSN1 163 aa8.99□□□□□ -0.97
TM9SF4-201ENST00000217315 HERV-K104P63124 156 aa8.98□□□□□ -0.97
TM9SF4-201ENST00000217315 IGSF10Q6WRI0 2623 aa8.98□□□□□ -0.97
TM9SF4-201ENST00000217315 A0A0B4J2C4 111 aa8.98□□□□□ -0.97
TM9SF4-201ENST00000217315 INSL3P51460 131 aa8.98□□□□□ -0.97
TM9SF4-201ENST00000217315 APOC4P55056 127 aa8.97□□□□□ -0.97
TM9SF4-201ENST00000217315 SND1-IT1Q9HBX3 110 aa8.97□□□□□ -0.97
TM9SF4-201ENST00000217315 ZFHX4Q86UP3 3567 aa8.97□□□□□ -0.97
TM9SF4-201ENST00000217315 NDUFA7O95182 113 aa8.97□□□□□ -0.97
TM9SF4-201ENST00000217315 TRAV13-2A0A0B4J235 113 aa8.97□□□□□ -0.97
TM9SF4-201ENST00000217315 LOC100131303A0A0U1RQF7 123 aa8.97□□□□□ -0.97
TM9SF4-201ENST00000217315 UBE2D1P51668 147 aa8.97□□□□□ -0.97
TM9SF4-201ENST00000217315 MRPS36P82909 103 aaKnown RBP8.97□□□□□ -0.97
TM9SF4-201ENST00000217315 GAGE2AQ6NT46 116 aa8.97□□□□□ -0.97
TM9SF4-201ENST00000217315 COX7B2Q8TF08 81 aa8.97□□□□□ -0.97
TM9SF4-201ENST00000217315 MIR7-3HGQ8N6C7 128 aa8.96□□□□□ -0.97
TM9SF4-201ENST00000217315 Q9UF83 564 aa8.96□□□□□ -0.97
TM9SF4-201ENST00000217315 SCGB1A1P11684 91 aa8.96□□□□□ -0.98
TM9SF4-201ENST00000217315 C1orf158Q8N1D5 194 aa8.96□□□□□ -0.98
TM9SF4-201ENST00000217315 TRIAP1O43715 76 aa8.95□□□□□ -0.98
TM9SF4-201ENST00000217315 ZNF575Q86XF7 245 aa8.95□□□□□ -0.98
TM9SF4-201ENST00000217315 C9orf66Q5T8R8 295 aa8.95□□□□□ -0.98
TM9SF4-201ENST00000217315 TRBV10-2A0A0K0K1G8 114 aa8.94□□□□□ -0.98
TM9SF4-201ENST00000217315 SMR3AQ99954 134 aa8.94□□□□□ -0.98
TM9SF4-201ENST00000217315 TIRAPP58753 221 aa8.94□□□□□ -0.98
TM9SF4-201ENST00000217315 LINC00482Q8N8I6 264 aa8.94□□□□□ -0.98
TM9SF4-201ENST00000217315 C15orf53Q8NAA6 179 aa8.94□□□□□ -0.98
TM9SF4-201ENST00000217315 USP24Q9UPU5 2620 aa8.94□□□□□ -0.98
TM9SF4-201ENST00000217315 BAALC-AS2P0C853 105 aa8.94□□□□□ -0.98
TM9SF4-201ENST00000217315 POM121L12Q8N7R1 296 aa8.94□□□□□ -0.98
TM9SF4-201ENST00000217315 CHCHD7Q9BUK0 85 aa8.94□□□□□ -0.98
TM9SF4-201ENST00000217315 PIK3CD-AS1Q5SR53 167 aa8.93□□□□□ -0.98
TM9SF4-201ENST00000217315 LINC00694P0DN24 101 aa8.92□□□□□ -0.98
TM9SF4-201ENST00000217315 LINC00308Q8TCZ7 52 aa8.92□□□□□ -0.98
TM9SF4-201ENST00000217315 PRO0255Q9UI72 69 aa8.92□□□□□ -0.98
TM9SF4-201ENST00000217315 TEX49A0A1B0GTD5 131 aa8.92□□□□□ -0.98
TM9SF4-201ENST00000217315 FAM222AQ5U5X8 452 aa8.92□□□□□ -0.98
TM9SF4-201ENST00000217315 OVOL2Q9BRP0 275 aa8.92□□□□□ -0.98
TM9SF4-201ENST00000217315 RELNP78509 3460 aa8.92□□□□□ -0.98
TM9SF4-201ENST00000217315 NDUFA1O15239 70 aa8.91□□□□□ -0.98
TM9SF4-201ENST00000217315 C3orf56Q8N813 242 aa8.91□□□□□ -0.98
TM9SF4-201ENST00000217315 AMELXQ99217 191 aa8.91□□□□□ -0.98
TM9SF4-201ENST00000217315 LINC00242Q5T6M2 205 aa8.91□□□□□ -0.98
TM9SF4-201ENST00000217315 TRBV6-8A0A0A6YYG3 113 aa8.9□□□□□ -0.98
TM9SF4-201ENST00000217315 TRBV6-4A0A1B0GX49 114 aa8.9□□□□□ -0.98
TM9SF4-201ENST00000217315 INAFM1C9JVW0 142 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms