RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 APOC4P55056 127 aa21.03■□□□□ 0.96
PABPN1-201ENST00000216727 SBSPONQ8IVN8 264 aa21.03■□□□□ 0.96
PABPN1-201ENST00000216727 C9orf118A6NHY6 69 aa21.02■□□□□ 0.96
PABPN1-201ENST00000216727 DGAT2L7PQ6IED9 249 aa21.02■□□□□ 0.96
PABPN1-201ENST00000216727 PLEKHB2Q96CS7 222 aa21.02■□□□□ 0.96
PABPN1-201ENST00000216727 SMIM13P0DJ93 91 aa21.02■□□□□ 0.96
PABPN1-201ENST00000216727 LGALS3P17931 250 aaKnown RBP21.01■□□□□ 0.95
PABPN1-201ENST00000216727 SMAGPQ0VAQ4 97 aa21■□□□□ 0.95
PABPN1-201ENST00000216727 LINC00694P0DN24 101 aa20.99■□□□□ 0.95
PABPN1-201ENST00000216727 UBE2D1P51668 147 aa20.99■□□□□ 0.95
PABPN1-201ENST00000216727 A0A0J9YY99 117 aa20.99■□□□□ 0.95
PABPN1-201ENST00000216727 LOC100131303A0A0U1RQF7 123 aa20.99■□□□□ 0.95
PABPN1-201ENST00000216727 CCL25O15444 150 aa20.98■□□□□ 0.95
PABPN1-201ENST00000216727 DEFB130BP0DP73 79 aa20.98■□□□□ 0.95
PABPN1-201ENST00000216727 DEFB130AP0DP74 79 aa20.98■□□□□ 0.95
PABPN1-201ENST00000216727 NHP2Q9NX24 153 aaKnown RBP20.96■□□□□ 0.95
PABPN1-201ENST00000216727 AMMECR1LQ6DCA0 310 aa20.95■□□□□ 0.94
PABPN1-201ENST00000216727 TIRAPP58753 221 aa20.95■□□□□ 0.94
PABPN1-201ENST00000216727 RAB37Q96AX2 223 aa20.95■□□□□ 0.94
PABPN1-201ENST00000216727 TMEM243Q9BU79 118 aa20.95■□□□□ 0.94
PABPN1-201ENST00000216727 LYRM9A8MSI8 78 aa20.94■□□□□ 0.94
PABPN1-201ENST00000216727 H7C423 109 aa20.94■□□□□ 0.94
PABPN1-201ENST00000216727 DEFB135Q30KP9 77 aa20.94■□□□□ 0.94
PABPN1-201ENST00000216727 OR5A1Q8NGJ0 315 aa20.94■□□□□ 0.94
PABPN1-201ENST00000216727 SPANXB1Q9NS25 103 aaPredicted RBP20.94■□□□□ 0.94
PABPN1-201ENST00000216727 TRRAPQ9Y4A5 3859 aa20.94■□□□□ 0.94
PABPN1-201ENST00000216727 IGLV5-45A0A087WSX0 123 aa20.92■□□□□ 0.94
PABPN1-201ENST00000216727 IGHV1-58A0A0C4DH39 117 aa20.92■□□□□ 0.94
PABPN1-201ENST00000216727 H3BUT2 72 aa20.92■□□□□ 0.94
PABPN1-201ENST00000216727 IGHV3-30-3P0DP02 117 aa20.92■□□□□ 0.94
PABPN1-201ENST00000216727 KRTAP24-1Q3LI83 254 aa20.92■□□□□ 0.94
PABPN1-201ENST00000216727 FAM19A3Q7Z5A8 133 aa20.92■□□□□ 0.94
PABPN1-201ENST00000216727 GEMIN7Q9H840 131 aaKnown RBP20.92■□□□□ 0.94
PABPN1-201ENST00000216727 IGHV3-64A0A075B6Q5 118 aa20.92■□□□□ 0.94
PABPN1-201ENST00000216727 SRSF9Q13242 221 aaKnown RBP eCLIP20.92■□□□□ 0.948e-30■□□□□ 8.3
PABPN1-201ENST00000216727 CDC42SE2Q9NRR3 84 aa20.91■□□□□ 0.94
PABPN1-201ENST00000216727 A0A1B0GWB2 263 aa20.9■□□□□ 0.94
PABPN1-201ENST00000216727 K7ERJ3 54 aa20.9■□□□□ 0.94
PABPN1-201ENST00000216727 UBE2L6O14933 153 aa20.9■□□□□ 0.94
PABPN1-201ENST00000216727 C12orf74Q32Q52 190 aa20.9■□□□□ 0.94
PABPN1-201ENST00000216727 FAM222AQ5U5X8 452 aa20.89■□□□□ 0.93
PABPN1-201ENST00000216727 VSIG2Q96IQ7 327 aa20.88■□□□□ 0.93
PABPN1-201ENST00000216727 TRBV6-8A0A0A6YYG3 113 aa20.87■□□□□ 0.93
PABPN1-201ENST00000216727 TRAV8-3A0A0A6YYJ7 113 aa20.87■□□□□ 0.93
PABPN1-201ENST00000216727 TMEM238LA0A1B0GVL6 79 aa20.87■□□□□ 0.93
PABPN1-201ENST00000216727 A6NJY4 79 aa20.87■□□□□ 0.93
PABPN1-201ENST00000216727 IGHV4-30-4P0DP06 118 aa20.87■□□□□ 0.93
PABPN1-201ENST00000216727 HERVK_113P63121 156 aa20.87■□□□□ 0.93
PABPN1-201ENST00000216727 TMEM101Q96IK0 257 aa20.87■□□□□ 0.93
PABPN1-201ENST00000216727 A0A1W2PPM0 123 aa20.86■□□□□ 0.93
PABPN1-201ENST00000216727 LINC00242Q5T6M2 205 aa20.86■□□□□ 0.93
PABPN1-201ENST00000216727 NBEAL2Q6ZNJ1 2754 aa20.85■□□□□ 0.93
PABPN1-201ENST00000216727 CDKN2A-AS1Q9UH64 79 aa20.85■□□□□ 0.93
PABPN1-201ENST00000216727 IGHV4-28A0A0C4DH34 117 aa20.85■□□□□ 0.93
PABPN1-201ENST00000216727 MIFP14174 115 aa20.85■□□□□ 0.93
PABPN1-201ENST00000216727 NAA38Q9BRA0 125 aaKnown RBP20.85■□□□□ 0.93
PABPN1-201ENST00000216727 PRO0255Q9UI72 69 aa20.85■□□□□ 0.93
PABPN1-201ENST00000216727 SAMD5Q5TGI4 173 aa20.84■□□□□ 0.93
PABPN1-201ENST00000216727 IGHV3-30P01768 117 aa20.83■□□□□ 0.93
PABPN1-201ENST00000216727 SPINK8P0C7L1 97 aa20.83■□□□□ 0.93
PABPN1-201ENST00000216727 IGHV3-30-5P0DP03 117 aa20.83■□□□□ 0.93
PABPN1-201ENST00000216727 C10orf126Q8N4M7 172 aa20.83■□□□□ 0.93
PABPN1-201ENST00000216727 GAGE10A6NGK3 116 aa20.82■□□□□ 0.92
PABPN1-201ENST00000216727 RNF183Q96D59 192 aa20.82■□□□□ 0.92
PABPN1-201ENST00000216727 GYPEP15421 78 aa20.82■□□□□ 0.92
PABPN1-201ENST00000216727 COX6A2Q02221 97 aa20.82■□□□□ 0.92
PABPN1-201ENST00000216727 Q8NAQ8 132 aa20.82■□□□□ 0.92
PABPN1-201ENST00000216727 GTF2H5Q6ZYL4 71 aa20.81■□□□□ 0.92
PABPN1-201ENST00000216727 A0A0J9YXY3 114 aa20.8■□□□□ 0.92
PABPN1-201ENST00000216727 FABP2P12104 132 aa20.8■□□□□ 0.92
PABPN1-201ENST00000216727 IGLL5B9A064 214 aa20.79■□□□□ 0.92
PABPN1-201ENST00000216727 K7EP34 96 aa20.79■□□□□ 0.92
PABPN1-201ENST00000216727 ATP6V0E2Q8NHE4 81 aa20.79■□□□□ 0.92
PABPN1-201ENST00000216727 TRAV13-1A0A0B4J241 112 aa20.78■□□□□ 0.92
PABPN1-201ENST00000216727 ZFAND6Q6FIF0 208 aa20.78■□□□□ 0.92
PABPN1-201ENST00000216727 NDUFA12Q9UI09 145 aa20.78■□□□□ 0.92
PABPN1-201ENST00000216727 TMEM238C9JI98 176 aa20.78■□□□□ 0.92
PABPN1-201ENST00000216727 DEFB4AO15263 64 aa20.78■□□□□ 0.92
PABPN1-201ENST00000216727 SHISA2Q6UWI4 295 aa20.78■□□□□ 0.92
PABPN1-201ENST00000216727 C3orf56Q8N813 242 aa20.78■□□□□ 0.92
PABPN1-201ENST00000216727 OXLD1Q5BKU9 147 aa20.77■□□□□ 0.92
PABPN1-201ENST00000216727 GAGE6Q13070 117 aa20.77■□□□□ 0.91
PABPN1-201ENST00000216727 IGLV5-39A0A0G2JS06 123 aa20.76■□□□□ 0.91
PABPN1-201ENST00000216727 CHCHD5Q9BSY4 110 aa20.76■□□□□ 0.91
PABPN1-201ENST00000216727 DAD1P61803 113 aa20.75■□□□□ 0.91
PABPN1-201ENST00000216727 SPCS1Q9Y6A9 102 aa20.75■□□□□ 0.91
PABPN1-201ENST00000216727 PAX4O43316 350 aa20.74■□□□□ 0.91
PABPN1-201ENST00000216727 A8MZ25 164 aa20.73■□□□□ 0.91
PABPN1-201ENST00000216727 EGFEM1PQ0D2K5 195 aa20.73■□□□□ 0.91
PABPN1-201ENST00000216727 KRTAP10-11P60412 298 aa20.72■□□□□ 0.91
PABPN1-201ENST00000216727 LITAFQ99732 161 aa20.71■□□□□ 0.91
PABPN1-201ENST00000216727 SPART-AS1P0CW21 52 aa20.71■□□□□ 0.91
PABPN1-201ENST00000216727 CELA1Q9UNI1 258 aa20.71■□□□□ 0.91
PABPN1-201ENST00000216727 IGLV4-60A0A075B6I1 120 aa20.7■□□□□ 0.9
PABPN1-201ENST00000216727 SMIM1B2RUZ4 78 aa20.7■□□□□ 0.9
PABPN1-201ENST00000216727 ATP5G1P05496 136 aa20.7■□□□□ 0.9
PABPN1-201ENST00000216727 FBN1P35555 2871 aaKnown RBP20.69■□□□□ 0.9
PABPN1-201ENST00000216727 F5H768 121 aa20.69■□□□□ 0.9
PABPN1-201ENST00000216727 NDUFA1O15239 70 aa20.69■□□□□ 0.9
PABPN1-201ENST00000216727 RPL24P83731 157 aaKnown RBP20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms