RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 LOC100131303A0A0U1RQF7 123 aa10.15□□□□□ -0.78
SIX4-201ENST00000216513 PLXNB1O43157 2135 aa10.15□□□□□ -0.78
SIX4-201ENST00000216513 C11orf86A6NJI1 115 aa10.14□□□□□ -0.79
SIX4-201ENST00000216513 C1orf134Q5TEV5 83 aa10.14□□□□□ -0.79
SIX4-201ENST00000216513 CFAP126Q5VTH2 177 aa10.14□□□□□ -0.79
SIX4-201ENST00000216513 WFDC2Q14508 124 aa10.14□□□□□ -0.79
SIX4-201ENST00000216513 FAM19A1Q7Z5A9 133 aa10.14□□□□□ -0.79
SIX4-201ENST00000216513 PRSS47A8MTI9 375 aa10.13□□□□□ -0.79
SIX4-201ENST00000216513 ZFAND2AQ8N6M9 145 aa10.13□□□□□ -0.79
SIX4-201ENST00000216513 DOPEY1Q5JWR5 2465 aa10.13□□□□□ -0.79
SIX4-201ENST00000216513 IGLV5-52A0A0A0MRZ9 124 aa10.13□□□□□ -0.79
SIX4-201ENST00000216513 Q8N976 141 aa10.13□□□□□ -0.79
SIX4-201ENST00000216513 CXCL5P42830 114 aa10.13□□□□□ -0.79
SIX4-201ENST00000216513 DCANP1Q8TF63 244 aa10.12□□□□□ -0.79
SIX4-201ENST00000216513 TLN2Q9Y4G6 2542 aa10.12□□□□□ -0.79
SIX4-201ENST00000216513 SS18L2Q9UHA2 77 aa10.12□□□□□ -0.79
SIX4-201ENST00000216513 ODF3L2Q3SX64 289 aa10.11□□□□□ -0.79
SIX4-201ENST00000216513 SLPIP03973 132 aa10.11□□□□□ -0.79
SIX4-201ENST00000216513 FUSP35637 526 aaKnown RBP eCLIP10.11□□□□□ -0.79
SIX4-201ENST00000216513 IGKV2D-26A0A0A0MRZ7 120 aa10.11□□□□□ -0.79
SIX4-201ENST00000216513 TRBV6-8A0A0A6YYG3 113 aa10.11□□□□□ -0.79
SIX4-201ENST00000216513 MIR7-3HGQ8N6C7 128 aa10.11□□□□□ -0.79
SIX4-201ENST00000216513 TRBV6-4A0A1B0GX49 114 aa10.1□□□□□ -0.79
SIX4-201ENST00000216513 NEXN-AS1Q8NBZ9 246 aa10.1□□□□□ -0.79
SIX4-201ENST00000216513 C5orf42Q9H799 3197 aa10.1□□□□□ -0.79
SIX4-201ENST00000216513 EPG5Q9HCE0 2579 aa10.09□□□□□ -0.79
SIX4-201ENST00000216513 FOXI1Q12951 378 aa10.09□□□□□ -0.79
SIX4-201ENST00000216513 FSHBP01225 129 aa10.09□□□□□ -0.79
SIX4-201ENST00000216513 LINC00467Q9BRT7 94 aa10.09□□□□□ -0.79
SIX4-201ENST00000216513 CHKB-CPT1BH3BT56 60 aa10.08□□□□□ -0.8
SIX4-201ENST00000216513 C14orf132Q9NPU4 83 aa10.08□□□□□ -0.8
SIX4-201ENST00000216513 UBE2D4Q9Y2X8 147 aa10.08□□□□□ -0.8
SIX4-201ENST00000216513 IGHV1-58A0A0C4DH39 117 aa10.08□□□□□ -0.8
SIX4-201ENST00000216513 IGLV2-8P01709 118 aa10.08□□□□□ -0.8
SIX4-201ENST00000216513 SYCNQ0VAF6 134 aa10.08□□□□□ -0.8
SIX4-201ENST00000216513 GAS8-AS1O95177 125 aa10.08□□□□□ -0.8
SIX4-201ENST00000216513 P0C879 139 aa10.08□□□□□ -0.8
SIX4-201ENST00000216513 LELP1Q5T871 98 aa10.08□□□□□ -0.8
SIX4-201ENST00000216513 WFDC9Q8NEX5 89 aa10.08□□□□□ -0.8
SIX4-201ENST00000216513 B5MCH6 92 aa10.07□□□□□ -0.8
SIX4-201ENST00000216513 MIAQ16674 131 aa10.07□□□□□ -0.8
SIX4-201ENST00000216513 SCXQ7RTU7 201 aa10.07□□□□□ -0.8
SIX4-201ENST00000216513 TOMM6Q96B49 74 aa10.07□□□□□ -0.8
SIX4-201ENST00000216513 EIF4EBP1Q13541 118 aaPredicted RBP10.07□□□□□ -0.8
SIX4-201ENST00000216513 NREPQ16612 68 aa10.06□□□□□ -0.8
SIX4-201ENST00000216513 MYO9AB2RTY4 2548 aa10.06□□□□□ -0.8
SIX4-201ENST00000216513 PTPRBP23467 1997 aa10.06□□□□□ -0.8
SIX4-201ENST00000216513 CRIP1P50238 77 aa10.06□□□□□ -0.8
SIX4-201ENST00000216513 CTRLP40313 264 aa10.06□□□□□ -0.8
SIX4-201ENST00000216513 FHL3Q13643 280 aa10.05□□□□□ -0.8
SIX4-201ENST00000216513 C11orf1Q9H5F2 150 aa10.05□□□□□ -0.8
SIX4-201ENST00000216513 C20orf203Q8NBC4 194 aa10.05□□□□□ -0.8
SIX4-201ENST00000216513 EXPH5Q8NEV8 1989 aa10.05□□□□□ -0.8
SIX4-201ENST00000216513 POLQO75417 2590 aa10.05□□□□□ -0.8
SIX4-201ENST00000216513 DIRC1Q969H9 104 aa10.05□□□□□ -0.8
SIX4-201ENST00000216513 XAGE1AQ9HD64 81 aa10.05□□□□□ -0.8
SIX4-201ENST00000216513 FN1P02751 2386 aaKnown RBP10.05□□□□□ -0.8
SIX4-201ENST00000216513 MRGPRG-AS1Q2M3A8 158 aa10.05□□□□□ -0.8
SIX4-201ENST00000216513 LINC01545Q5VT33 79 aa10.05□□□□□ -0.8
SIX4-201ENST00000216513 COL4A2P08572 1712 aa10.05□□□□□ -0.8
SIX4-201ENST00000216513 PIK3CD-AS1Q5SR53 167 aa10.04□□□□□ -0.8
SIX4-201ENST00000216513 PKD1L2Q7Z442 2459 aa10.04□□□□□ -0.8
SIX4-201ENST00000216513 ODF1Q14990 250 aa10.04□□□□□ -0.8
SIX4-201ENST00000216513 UFSP1Q6NVU6 142 aa10.04□□□□□ -0.8
SIX4-201ENST00000216513 H0Y9J4 135 aa10.04□□□□□ -0.8
SIX4-201ENST00000216513 HRCT1Q6UXD1 115 aa10.04□□□□□ -0.8
SIX4-201ENST00000216513 IGLV2-11P01706 119 aa10.03□□□□□ -0.8
SIX4-201ENST00000216513 RBX1P62877 108 aa10.03□□□□□ -0.8
SIX4-201ENST00000216513 RNASE8Q8TDE3 154 aaKnown RBP10.03□□□□□ -0.8
SIX4-201ENST00000216513 NDUFB1O75438 58 aa10.03□□□□□ -0.8
SIX4-201ENST00000216513 PRR9Q5T870 116 aa10.03□□□□□ -0.8
SIX4-201ENST00000216513 A0A1B0GX51 115 aa10.02□□□□□ -0.81
SIX4-201ENST00000216513 C19orf71A6NCJ1 209 aa10.02□□□□□ -0.81
SIX4-201ENST00000216513 UBE2D3P61077 147 aa10.01□□□□□ -0.81
SIX4-201ENST00000216513 TAX1BP3O14907 124 aa10.01□□□□□ -0.81
SIX4-201ENST00000216513 PPDPFQ9H3Y8 114 aa10.01□□□□□ -0.81
SIX4-201ENST00000216513 LINC01620Q4KN68 170 aa10.01□□□□□ -0.81
SIX4-201ENST00000216513 MDFIQ99750 246 aa10.01□□□□□ -0.81
SIX4-201ENST00000216513 FAM236AA0A1B0GUQ0 79 aa10□□□□□ -0.81
SIX4-201ENST00000216513 FAM236BA0A1B0GV22 79 aa10□□□□□ -0.81
SIX4-201ENST00000216513 USP9XQ93008 2570 aaPredicted RBP10□□□□□ -0.81
SIX4-201ENST00000216513 H0YGX0 51 aa10□□□□□ -0.81
SIX4-201ENST00000216513 H7C423 109 aa9.99□□□□□ -0.81
SIX4-201ENST00000216513 SBSPONQ8IVN8 264 aa9.99□□□□□ -0.81
SIX4-201ENST00000216513 MAPKAPK5-AS1Q8N8E1 139 aa9.99□□□□□ -0.81
SIX4-201ENST00000216513 IGKV2-28A0A075B6P5 120 aa9.99□□□□□ -0.81
SIX4-201ENST00000216513 IGKV2D-28P01615 120 aa9.99□□□□□ -0.81
SIX4-201ENST00000216513 SPATA12Q7Z6I5 190 aa9.98□□□□□ -0.81
SIX4-201ENST00000216513 C2CD3Q4AC94 2353 aa9.98□□□□□ -0.81
SIX4-201ENST00000216513 A0A0B4J2C4 111 aa9.98□□□□□ -0.81
SIX4-201ENST00000216513 LOC107984640A0A0U1RRK4 108 aa9.98□□□□□ -0.81
SIX4-201ENST00000216513 COX7BP24311 80 aa9.98□□□□□ -0.81
SIX4-201ENST00000216513 WWC2-AS2Q96NR7 200 aa9.98□□□□□ -0.81
SIX4-201ENST00000216513 CDKN2A-AS1Q9UH64 79 aa9.98□□□□□ -0.81
SIX4-201ENST00000216513 HCFC1P51610 2035 aa9.97□□□□□ -0.81
SIX4-201ENST00000216513 TMEM258P61165 79 aa9.97□□□□□ -0.81
SIX4-201ENST00000216513 E9PLD3 99 aa9.97□□□□□ -0.81
SIX4-201ENST00000216513 TCL1BO95988 128 aa9.97□□□□□ -0.81
SIX4-201ENST00000216513 MUC7Q8TAX7 377 aa9.97□□□□□ -0.81
SIX4-201ENST00000216513 TET2Q6N021 2002 aaPredicted RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms