RNA–Protein interactions for RNA: ENSMUST00000215817.1

Upf1-202, Transcript of Regulator of nonsense transcripts 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Upf1, Length 4,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1-202ENSMUST00000215817 RhobP62746 196 aa12.56□□□□□ -0.4
Upf1-202ENSMUST00000215817 Znrd1Q791N7 123 aa12.56□□□□□ -0.4
Upf1-202ENSMUST00000215817 Gm5868Q8BJG1 145 aa12.56□□□□□ -0.4
Upf1-202ENSMUST00000215817 Mogat1Q91ZV4 335 aa12.56□□□□□ -0.4
Upf1-202ENSMUST00000215817 Chchd1Q9CQA6 118 aa12.56□□□□□ -0.4
Upf1-202ENSMUST00000215817 Shisal2bQ9D1Y9 158 aa12.56□□□□□ -0.4
Upf1-202ENSMUST00000215817 Susd2Q9DBX3 820 aa12.56□□□□□ -0.4
Upf1-202ENSMUST00000215817 Ankrd66J3QNN4 192 aa12.56□□□□□ -0.4
Upf1-202ENSMUST00000215817 Ube2l3P68037 154 aaKnown RBP12.56□□□□□ -0.4
Upf1-202ENSMUST00000215817 Col8a1Q00780 744 aa12.56□□□□□ -0.4
Upf1-202ENSMUST00000215817 Col6a3E9PWQ3 3284 aa12.56□□□□□ -0.4
Upf1-202ENSMUST00000215817 P04945 108 aa12.56□□□□□ -0.4
Upf1-202ENSMUST00000215817 Cela2aP05208 271 aa12.56□□□□□ -0.4
Upf1-202ENSMUST00000215817 Ccl1P10146 92 aa12.56□□□□□ -0.4
Upf1-202ENSMUST00000215817 Lipt2Q9D009 231 aa12.56□□□□□ -0.4
Upf1-202ENSMUST00000215817 Nubp1Q9R060 320 aa12.56□□□□□ -0.4
Upf1-202ENSMUST00000215817 Dmxl1Q6PNC0 3013 aa12.55□□□□□ -0.4
Upf1-202ENSMUST00000215817 Gm6993A0A1W2P738 69 aa12.55□□□□□ -0.4
Upf1-202ENSMUST00000215817 Wt1P22561 449 aa12.55□□□□□ -0.4
Upf1-202ENSMUST00000215817 Smim9Q3V0X1 137 aa12.55□□□□□ -0.4
Upf1-202ENSMUST00000215817 Olfr1535Q7TQU0 326 aa12.55□□□□□ -0.4
Upf1-202ENSMUST00000215817 C1qtnf5Q8K479 243 aa12.55□□□□□ -0.4
Upf1-202ENSMUST00000215817 Rab11fip5Q8R361 645 aa12.55□□□□□ -0.4
Upf1-202ENSMUST00000215817 Fhl3Q9R059 289 aa12.55□□□□□ -0.4
Upf1-202ENSMUST00000215817 Trav17A0A075B655 113 aa12.55□□□□□ -0.4
Upf1-202ENSMUST00000215817 AponG3X9D6 251 aa12.55□□□□□ -0.4
Upf1-202ENSMUST00000215817 Erdr1J3QMM0 206 aa12.55□□□□□ -0.4
Upf1-202ENSMUST00000215817 CfdP03953 259 aa12.55□□□□□ -0.4
Upf1-202ENSMUST00000215817 Prop1P97458 223 aa12.55□□□□□ -0.4
Upf1-202ENSMUST00000215817 Rnf166Q3U9F6 237 aa12.55□□□□□ -0.4
Upf1-202ENSMUST00000215817 Mad2l1bpQ9DCX1 276 aa12.55□□□□□ -0.4
Upf1-202ENSMUST00000215817 IcosQ9WVS0 200 aa12.55□□□□□ -0.4
Upf1-202ENSMUST00000215817 Gm37797A0A1D5RLC8 261 aa12.55□□□□□ -0.4
Upf1-202ENSMUST00000215817 V1rd19Q3KNP5 305 aa12.55□□□□□ -0.4
Upf1-202ENSMUST00000215817 MiaQ61865 130 aa12.55□□□□□ -0.4
Upf1-202ENSMUST00000215817 Onecut2Q6XBJ3 505 aa12.55□□□□□ -0.4
Upf1-202ENSMUST00000215817 Tmem230Q8CIB6 120 aa12.55□□□□□ -0.4
Upf1-202ENSMUST00000215817 Olfr715Q8VG49 315 aa12.55□□□□□ -0.4
Upf1-202ENSMUST00000215817 Olfr1024A2ASU7 327 aa12.54□□□□□ -0.4
Upf1-202ENSMUST00000215817 Scgb2a2J3KMP9 96 aa12.54□□□□□ -0.4
Upf1-202ENSMUST00000215817 Ccr6O54689 367 aa12.54□□□□□ -0.4
Upf1-202ENSMUST00000215817 Wnt2P21552 360 aa12.54□□□□□ -0.4
Upf1-202ENSMUST00000215817 Cd200r3Q5UKY4 296 aa12.54□□□□□ -0.4
Upf1-202ENSMUST00000215817 Olfr996Q7TRA0 314 aa12.54□□□□□ -0.4
Upf1-202ENSMUST00000215817 Ndufs8Q8K3J1 212 aa12.54□□□□□ -0.4
Upf1-202ENSMUST00000215817 Fbln5Q9WVH9 448 aa12.54□□□□□ -0.4
Upf1-202ENSMUST00000215817 Fbn2Q61555 2907 aa12.54□□□□□ -0.4
Upf1-202ENSMUST00000215817 Atp5iQ06185 71 aaKnown RBP12.54□□□□□ -0.4
Upf1-202ENSMUST00000215817 Coq2Q66JT7 374 aa12.54□□□□□ -0.4
Upf1-202ENSMUST00000215817 EppinQ9DA01 134 aa12.54□□□□□ -0.4
Upf1-202ENSMUST00000215817 Arpc1aQ9R0Q6 370 aa12.54□□□□□ -0.4
Upf1-202ENSMUST00000215817 St6galnac3Q9WUV2 305 aa12.54□□□□□ -0.4
Upf1-202ENSMUST00000215817 Ighv7-4A0A0A6YXL5 121 aa12.54□□□□□ -0.4
Upf1-202ENSMUST00000215817 CntfrO88507 372 aa12.54□□□□□ -0.4
Upf1-202ENSMUST00000215817 AgaQ64191 346 aa12.54□□□□□ -0.4
Upf1-202ENSMUST00000215817 Zfp455Q7M6X9 461 aa12.54□□□□□ -0.4
Upf1-202ENSMUST00000215817 Olfr965Q7TRA7 312 aa12.54□□□□□ -0.4
Upf1-202ENSMUST00000215817 Q8CF25 301 aa12.54□□□□□ -0.4
Upf1-202ENSMUST00000215817 Gm4763Q8CFJ5 196 aa12.54□□□□□ -0.4
Upf1-202ENSMUST00000215817 Olfr1256Q8VGP1 306 aa12.54□□□□□ -0.4
Upf1-202ENSMUST00000215817 Acrv1P50289 261 aa12.54□□□□□ -0.4
Upf1-202ENSMUST00000215817 Slc25a5P51881 298 aaKnown RBP12.54□□□□□ -0.4
Upf1-202ENSMUST00000215817 Ldlrad2Q3V0V0 142 aa12.54□□□□□ -0.4
Upf1-202ENSMUST00000215817 Defa24Q5G865 93 aa12.54□□□□□ -0.4
Upf1-202ENSMUST00000215817 Syngr2O55101 224 aa12.53□□□□□ -0.4
Upf1-202ENSMUST00000215817 Ifna4P07351 186 aa12.53□□□□□ -0.4
Upf1-202ENSMUST00000215817 Olfr1246Q7TQZ6 314 aa12.53□□□□□ -0.4
Upf1-202ENSMUST00000215817 Gm9913Q8BQQ2 135 aa12.53□□□□□ -0.4
Upf1-202ENSMUST00000215817 Nav3Q80TN7 2359 aa12.53□□□□□ -0.4
Upf1-202ENSMUST00000215817 Hist1h2bfP10853 126 aa12.53□□□□□ -0.4
Upf1-202ENSMUST00000215817 G6pcP35576 357 aa12.53□□□□□ -0.4
Upf1-202ENSMUST00000215817 Hist1h2bbQ64475 126 aa12.53□□□□□ -0.4
Upf1-202ENSMUST00000215817 Tnfsf18Q7TS55 173 aa12.53□□□□□ -0.4
Upf1-202ENSMUST00000215817 Eda2rQ8BX35 297 aa12.53□□□□□ -0.4
Upf1-202ENSMUST00000215817 Hist1h2bkQ8CGP1 126 aaKnown RBP12.53□□□□□ -0.4
Upf1-202ENSMUST00000215817 Hist1h2bpQ8CGP2 126 aaKnown RBP12.53□□□□□ -0.4
Upf1-202ENSMUST00000215817 Ufc1Q9CR09 167 aa12.53□□□□□ -0.4
Upf1-202ENSMUST00000215817 Gm37988J3QM41 62 aa12.53□□□□□ -0.4
Upf1-202ENSMUST00000215817 Gsx1P31315 261 aa12.53□□□□□ -0.4
Upf1-202ENSMUST00000215817 Phf13Q8K2W6 296 aa12.53□□□□□ -0.4
Upf1-202ENSMUST00000215817 ManfQ9CXI5 179 aaKnown RBP12.53□□□□□ -0.4
Upf1-202ENSMUST00000215817 Mettl26Q9DCS2 204 aa12.53□□□□□ -0.4
Upf1-202ENSMUST00000215817 Prss22Q9ER10 306 aa12.53□□□□□ -0.4
Upf1-202ENSMUST00000215817 Gm20708H3BKF4 155 aa12.52□□□□□ -0.4
Upf1-202ENSMUST00000215817 Pilrb2Q2YFS1 225 aa12.52□□□□□ -0.4
Upf1-202ENSMUST00000215817 Cks1brtQ3UNC9 96 aa12.52□□□□□ -0.4
Upf1-202ENSMUST00000215817 Mpv17lQ99MS3 194 aa12.52□□□□□ -0.4
Upf1-202ENSMUST00000215817 Gm21974F6W3F3 119 aa12.52□□□□□ -0.4
Upf1-202ENSMUST00000215817 Bsph2Q0Q236 131 aa12.52□□□□□ -0.4
Upf1-202ENSMUST00000215817 Klf12O35738 402 aa12.52□□□□□ -0.41
Upf1-202ENSMUST00000215817 Iglc3P01845 104 aa12.52□□□□□ -0.41
Upf1-202ENSMUST00000215817 Defb30Q30KN4 75 aa12.52□□□□□ -0.41
Upf1-202ENSMUST00000215817 Trappc1Q5NCF2 145 aa12.52□□□□□ -0.41
Upf1-202ENSMUST00000215817 Olfr1258Q8VGN6 311 aa12.52□□□□□ -0.41
Upf1-202ENSMUST00000215817 Cep192E9Q4Y4 2514 aaKnown RBP12.51□□□□□ -0.41
Upf1-202ENSMUST00000215817 Ighv6-3A0A075B5T2 118 aa12.51□□□□□ -0.41
Upf1-202ENSMUST00000215817 Olfr284A0A0U1RP76 321 aa12.51□□□□□ -0.41
Upf1-202ENSMUST00000215817 Tex54G3UW99 86 aa12.51□□□□□ -0.41
Upf1-202ENSMUST00000215817 Mbd6Q3TY92 1003 aa12.51□□□□□ -0.41
Upf1-202ENSMUST00000215817 A3galt2Q3V1N9 370 aa12.51□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 53.5 ms