RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Vstm2aQ8R0A6 236 aa5.65□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Cma2Q91VB1 246 aa5.65□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Sval2Q99N75 144 aa5.65□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Vmn1r46Q9EQ45 309 aa5.65□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Gm28845A0A087WR76 214 aa5.65□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Omt2bD3YX29 119 aa5.65□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Gm20815J3KMI0 227 aa5.65□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Gm20914J3QME2 227 aa5.65□□□□□ -1.51
Bdnf-201ENSMUST00000053317 MyadmO35682 320 aaKnown RBP5.65□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Foxa2P35583 459 aa5.65□□□□□ -1.51
Bdnf-201ENSMUST00000053317 FmodP50608 376 aa5.65□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Gm21292Q78EE2 227 aa5.65□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Olfr153Q7TR48 307 aa5.65□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Q8C3M9 231 aa5.65□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Gins3Q9CY94 216 aa5.65□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Tex43Q9D9I1 141 aa5.65□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Ctnnbip1Q9JJN6 81 aa5.65□□□□□ -1.51
Bdnf-201ENSMUST00000053317 SelenokQ9JLJ1 94 aa5.65□□□□□ -1.51
Bdnf-201ENSMUST00000053317 P01724 129 aa5.65□□□□□ -1.51
Bdnf-201ENSMUST00000053317 P01759 136 aa5.65□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Sub1P11031 127 aaKnown RBP5.65□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Trat1Q3UU67 187 aa5.65□□□□□ -1.51
Bdnf-201ENSMUST00000053317 LgalslbQ7TPX9 165 aa5.65□□□□□ -1.51
Bdnf-201ENSMUST00000053317 AdtrpQ8C138 230 aa5.65□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Sfxn4Q925N1 313 aa5.65□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Col7a1Q63870 2944 aa5.64□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Cmya5Q70KF4 3739 aa5.64□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Olfr753-ps1A0A140LHN3 164 aa5.64□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Gm37797A0A1D5RLC8 261 aa5.64□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Esp3J3QN49 87 aa5.64□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Gm20821J3QPJ2 227 aa5.64□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Dkk1O54908 272 aa5.64□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Gpm6bP35803 328 aa5.64□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Hist1h1dP43277 221 aaKnown RBP5.64□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Lmo4P61969 165 aa5.64□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Ammecr1lQ8JZZ6 310 aa5.64□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Pxt1Q8K459 51 aa5.64□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Olfr1431Q8VF59 312 aa5.64□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Wdr4Q9EP82 413 aa5.64□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Myoz1Q9JK37 296 aa5.64□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Ighv9-2A0A0B4J1J4 117 aa5.64□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Olfr906K7N5P3 311 aa5.64□□□□□ -1.51
Bdnf-201ENSMUST00000053317 CntfrO88507 372 aa5.64□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Gsx1P31315 261 aa5.64□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Slc25a5P51881 298 aaKnown RBP5.64□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Gm614Q3V2K1 191 aa5.64□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Zic3Q62521 466 aa5.64□□□□□ -1.51
Bdnf-201ENSMUST00000053317 BsxQ810B3 232 aa5.64□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Vmn1r202Q8R259 302 aa5.64□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Bles03Q8VD62 251 aa5.64□□□□□ -1.51
Bdnf-201ENSMUST00000053317 SdhdQ9CXV1 159 aa5.64□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Gm45623A0A1B0GSF6 103 aa5.64□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Ctxnd1A0A1B0GST9 59 aa5.64□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Krtap28-10A0A1Y7VP58 119 aa5.64□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Gm8653K9J7G2 307 aa5.64□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Vmn1r117L7N2C9 307 aa5.64□□□□□ -1.51
Bdnf-201ENSMUST00000053317 IappP12968 93 aa5.64□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Slc17a2Q5SZA1 478 aa5.64□□□□□ -1.51
Bdnf-201ENSMUST00000053317 EpopQ7TNS8 369 aa5.64□□□□□ -1.51
Bdnf-201ENSMUST00000053317 SprnQ8BWU1 147 aa5.64□□□□□ -1.51
Bdnf-201ENSMUST00000053317 GaptQ8CB93 157 aa5.64□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Olfr470Q8VF65 314 aa5.64□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Olfr577Q8VH11 312 aa5.64□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Tmem147Q9CQG6 224 aa5.64□□□□□ -1.51
Bdnf-201ENSMUST00000053317 LbhQ9CX60 105 aa5.64□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Srsf9Q9D0B0 222 aaKnown RBP5.64□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Spcs1Q9D958 161 aa5.64□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Suclg1Q9WUM5 346 aaKnown RBP5.64□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Igkv1-133A0A0B4J1H8 120 aa5.63□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Vmn1r119E9Q4H3 307 aa5.63□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Ccl2P10148 148 aa5.63□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Ucp2P70406 309 aa5.63□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Tmem52bQ0VBF2 186 aa5.63□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Arl14eplQ3UKZ7 152 aa5.63□□□□□ -1.51
Bdnf-201ENSMUST00000053317 A3galt2Q3V1N9 370 aa5.63□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Psg22Q810J1 475 aa5.63□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Elovl5Q8BHI7 299 aa5.63□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Tusc5Q8C838 173 aa5.63□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Olfr76Q8VFV2 317 aa5.63□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Q9CR34 168 aa5.63□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Tctex1d1Q9D5I4 173 aa5.63□□□□□ -1.51
Bdnf-201ENSMUST00000053317 MNCb-2875Q9DCB3 74 aa5.63□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Hils1Q9QYL0 170 aa5.63□□□□□ -1.51
Bdnf-201ENSMUST00000053317 CcsQ9WU84 274 aa5.63□□□□□ -1.51
Bdnf-201ENSMUST00000053317 AcanQ61282 2132 aaKnown RBP5.63□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Ighv1-20A0A0A6YX66 117 aa5.63□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Olfr1016A2ASV2 309 aa5.63□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Gm21310J3QQ23 232 aa5.63□□□□□ -1.51
Bdnf-201ENSMUST00000053317 F2rl2O08675 369 aa5.63□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Mtatp6P00848 226 aa5.63□□□□□ -1.51
Bdnf-201ENSMUST00000053317 RhobP62746 196 aa5.63□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Adam8Q05910 826 aa5.63□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Tff1Q08423 87 aa5.63□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Vmn1r181Q0P547 304 aa5.63□□□□□ -1.51
Bdnf-201ENSMUST00000053317 B020031M17RikQ3UT11 173 aa5.63□□□□□ -1.51
Bdnf-201ENSMUST00000053317 SriQ6P069 198 aa5.63□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Atxn7l1Q9CZ05 146 aa5.63□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Tmem50bQ9D1X9 158 aa5.63□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Tbx21Q9JKD8 530 aa5.63□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Aifm1Q9Z0X1 612 aa5.63□□□□□ -1.51
Retrieved 100 of 22,080 RNA–protein pairs in 49.6 ms