RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Trip12G5E870 2025 aaKnown RBP11.8□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Igkv12-38A0A0G2JEI7 115 aa11.8□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Tmprss12Q3V0Q7 336 aa11.8□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Ighv1-54A0A075B5W5 117 aa11.8□□□□□ -0.52
Col5a1-201ENSMUST00000028280 GhrhP16043 103 aa11.8□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Prima1Q810F0 153 aa11.8□□□□□ -0.52
Col5a1-201ENSMUST00000028280 CenpeQ6RT24 2474 aaKnown RBP11.8□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Ssc4dA1L0T3 586 aa11.8□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Cd5P13379 494 aa11.8□□□□□ -0.52
Col5a1-201ENSMUST00000028280 P01637 128 aa11.8□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Rpl23P62830 140 aaKnown RBP11.8□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Tspan2Q922J6 221 aa11.8□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Ube2zQ3UE37 356 aa11.8□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Lrp10Q7TQH7 713 aa11.8□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Srp19Q9D7A6 144 aa11.8□□□□□ -0.52
Col5a1-201ENSMUST00000028280 GlmpQ9JHJ3 404 aa11.8□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Arhgap21Q6DFV3 1944 aa11.8□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Ighv8-9A0A0G2JET1 119 aa11.8□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Bricd5Q8BV89 174 aa11.8□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Sh3bgrl3Q91VW3 93 aa11.8□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Lbhd2G3UW55 114 aa11.79□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Col9a1Q05722 921 aa11.79□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Dtx2Q8R3P2 619 aa11.79□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Zfp707F6QUN2 391 aa11.79□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Fam240bJ3QMB3 78 aa11.79□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Ccl2P10148 148 aa11.79□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Hist1h2bfP10853 126 aa11.79□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Hist1h2bbQ64475 126 aa11.79□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Hist1h2bkQ8CGP1 126 aaKnown RBP11.79□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Hist1h2bpQ8CGP2 126 aaKnown RBP11.79□□□□□ -0.52
Col5a1-201ENSMUST00000028280 TirapQ99JY1 241 aa11.79□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Anapc1P53995 1944 aaKnown RBP11.79□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Ighv5-6A0A075B5Q0 117 aa11.79□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Gm29423A0A087WRM1 55 aa11.79□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Igkv4-53A0A0G2JFC6 119 aa11.79□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Zfp976E9Q981 636 aa11.79□□□□□ -0.52
Col5a1-201ENSMUST00000028280 MscO88940 201 aa11.79□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Sumo3Q9Z172 110 aa11.79□□□□□ -0.52
Col5a1-201ENSMUST00000028280 CrebbpP45481 2441 aa11.79□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Klf13Q9JJZ6 289 aa11.79□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Mllt11P97783 90 aa11.78□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Tomm7Q9D173 55 aa11.78□□□□□ -0.52
Col5a1-201ENSMUST00000028280 H2afb1Q9CQ70 111 aa11.78□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Cnot1Q6ZQ08 2375 aaKnown RBP11.78□□□□□ -0.52
Col5a1-201ENSMUST00000028280 CntfrO88507 372 aa11.78□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Faap20Q3UN58 186 aa11.78□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Klf2Q60843 354 aaKnown RBP11.78□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Gtsf1lQ9CWD0 151 aa11.78□□□□□ -0.52
Col5a1-201ENSMUST00000028280 4930412O13RikQ9D5M9 106 aa11.78□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Ca11O70354 328 aa11.78□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Mrpl36Q99N90 102 aa11.78□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Tmem131O70472 1877 aa11.78□□□□□ -0.52
Col5a1-201ENSMUST00000028280 MpzP27573 248 aa11.78□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Rpl32P62911 135 aaKnown RBP11.78□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Bex1Q9R224 128 aa11.78□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Znf146Q8BQN6 292 aa11.78□□□□□ -0.52
Col5a1-201ENSMUST00000028280 GrhprQ91Z53 328 aa11.78□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Ssbp1Q9CYR0 152 aaKnown RBP11.78□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Ighv1-15A0A0A6YXA5 117 aa11.78□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Zfp362B1ASA5 418 aa11.78□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Cd8bP10300 213 aa11.78□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Spint5J3KMK8 105 aa11.77□□□□□ -0.52
Col5a1-201ENSMUST00000028280 CiartQ3TQ03 375 aa11.77□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Prss46Q5M8S2 314 aa11.77□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Gm10799F7C7U2 104 aa11.77□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Q149G0 166 aaKnown RBP11.77□□□□□ -0.52
Col5a1-201ENSMUST00000028280 HrkP62816 92 aa11.77□□□□□ -0.53
Col5a1-201ENSMUST00000028280 Prss30Q9QYZ9 310 aa11.77□□□□□ -0.53
Col5a1-201ENSMUST00000028280 Rs1Q9Z1L4 224 aa11.77□□□□□ -0.53
Col5a1-201ENSMUST00000028280 Tmem196V9GX04 182 aa11.77□□□□□ -0.53
Col5a1-201ENSMUST00000028280 KcpQ3U492 1550 aa11.77□□□□□ -0.53
Col5a1-201ENSMUST00000028280 Gm11020F6ZGD5 61 aa11.77□□□□□ -0.53
Col5a1-201ENSMUST00000028280 Ifitm7G3X9Z2 141 aa11.77□□□□□ -0.53
Col5a1-201ENSMUST00000028280 Ntn1O09118 604 aa11.77□□□□□ -0.53
Col5a1-201ENSMUST00000028280 P01629 112 aa11.77□□□□□ -0.53
Col5a1-201ENSMUST00000028280 P01654 111 aa11.77□□□□□ -0.53
Col5a1-201ENSMUST00000028280 P01656 111 aa11.77□□□□□ -0.53
Col5a1-201ENSMUST00000028280 P03977 111 aa11.77□□□□□ -0.53
Col5a1-201ENSMUST00000028280 Chac1Q8R3J5 223 aa11.77□□□□□ -0.53
Col5a1-201ENSMUST00000028280 Trav3-4A0A075B654 114 aa11.77□□□□□ -0.53
Col5a1-201ENSMUST00000028280 Trbv30A0A0B4J1P1 111 aa11.77□□□□□ -0.53
Col5a1-201ENSMUST00000028280 H3BKT1 185 aa11.77□□□□□ -0.53
Col5a1-201ENSMUST00000028280 GalnsQ571E4 520 aa11.77□□□□□ -0.53
Col5a1-201ENSMUST00000028280 Hamp2Q80T19 83 aa11.77□□□□□ -0.53
Col5a1-201ENSMUST00000028280 Rspo2Q8BFU0 243 aa11.77□□□□□ -0.53
Col5a1-201ENSMUST00000028280 Mrpl52Q9D0Y8 121 aa11.77□□□□□ -0.53
Col5a1-201ENSMUST00000028280 Frrs1lB1AXV0 293 aa11.76□□□□□ -0.53
Col5a1-201ENSMUST00000028280 Zfp977L7N2E7 438 aa11.76□□□□□ -0.53
Col5a1-201ENSMUST00000028280 Lgals6O54891 301 aa11.76□□□□□ -0.53
Col5a1-201ENSMUST00000028280 Ndufa7Q9Z1P6 113 aaKnown RBP11.76□□□□□ -0.53
Col5a1-201ENSMUST00000028280 Trav18A0A075B656 109 aa11.76□□□□□ -0.53
Col5a1-201ENSMUST00000028280 Gm7102J3QQ10 178 aa11.76□□□□□ -0.53
Col5a1-201ENSMUST00000028280 Lamtor3O88653 124 aa11.76□□□□□ -0.53
Col5a1-201ENSMUST00000028280 Atg2aQ6P4T0 1914 aa11.76□□□□□ -0.53
Col5a1-201ENSMUST00000028280 SisF8VQM5 1818 aa11.76□□□□□ -0.53
Col5a1-201ENSMUST00000028280 Trav7d-3Q5R1I1 112 aa11.76□□□□□ -0.53
Col5a1-201ENSMUST00000028280 TdhQ8K3F7 373 aa11.76□□□□□ -0.53
Col5a1-201ENSMUST00000028280 Znhit1Q8R331 154 aa11.76□□□□□ -0.53
Col5a1-201ENSMUST00000028280 Ube2v1Q9CZY3 147 aa11.76□□□□□ -0.53
Col5a1-201ENSMUST00000028280 P01746 140 aa11.76□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 33.3 ms