RNA–Protein interactions for RNA: YPL176C

TRE1, Transcript of Transferrin receptor-like protein, yeast

Gene TRE1, Length 2,352 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRE1	YPL176C	POL3	P15436	1097 aa		4.82	□□□□□ -1.64
TRE1	YPL176C	DBP2	P24783	546 aa	Known RBP	4.82	□□□□□ -1.64
TRE1	YPL176C	YUH1	P35127	236 aa		4.82	□□□□□ -1.64
TRE1	YPL176C	STB6	P36085	766 aa		4.82	□□□□□ -1.64
TRE1	YPL176C	SLS1	P42900	643 aa		4.82	□□□□□ -1.64
TRE1	YPL176C	MET12	P46151	657 aa		4.82	□□□□□ -1.64
TRE1	YPL176C	YBP2	P53169	641 aa		4.82	□□□□□ -1.64
TRE1	YPL176C	RPT6	Q01939	405 aa	Known RBP	4.82	□□□□□ -1.64
TRE1	YPL176C	ECM22	Q05958	814 aa	Predicted RBP	4.82	□□□□□ -1.64
TRE1	YPL176C	EST2	Q06163	884 aa		4.82	□□□□□ -1.64
TRE1	YPL176C	RTC5	Q12108	567 aa	Known RBP	4.82	□□□□□ -1.64
TRE1	YPL176C	ADF1	Q2V2Q1	113 aa		4.82	□□□□□ -1.64
TRE1	YPL176C	DNF2	Q12675	1612 aa		4.81	□□□□□ -1.64
TRE1	YPL176C	PUT4	P15380	627 aa		4.81	□□□□□ -1.64
TRE1	YPL176C	GRR1	P24814	1151 aa		4.81	□□□□□ -1.64
TRE1	YPL176C	DMC1	P25453	334 aa		4.81	□□□□□ -1.64
TRE1	YPL176C	ASF2	P32448	525 aa	Predicted RBP	4.81	□□□□□ -1.64
TRE1	YPL176C	MRP4	P32902	394 aa		4.81	□□□□□ -1.64
TRE1	YPL176C	YRO2	P38079	344 aa		4.81	□□□□□ -1.64
TRE1	YPL176C	YBR138C	P38277	524 aa		4.81	□□□□□ -1.64
TRE1	YPL176C	PSD1	P39006	500 aa		4.81	□□□□□ -1.64
TRE1	YPL176C	SCS2	P40075	244 aa	Known RBP	4.81	□□□□□ -1.64
TRE1	YPL176C	SIP4	P46954	829 aa		4.81	□□□□□ -1.64
TRE1	YPL176C	MRX6	P48564	524 aa		4.81	□□□□□ -1.64
TRE1	YPL176C	ALT1	P52893	592 aa		4.81	□□□□□ -1.64
TRE1	YPL176C	TEL2	P53038	688 aa		4.81	□□□□□ -1.64
TRE1	YPL176C	NCS6	P53088	359 aa		4.81	□□□□□ -1.64
TRE1	YPL176C	BSC5	P53755	489 aa		4.81	□□□□□ -1.64
TRE1	YPL176C	JJJ1	P53863	590 aa		4.81	□□□□□ -1.64
TRE1	YPL176C	UTP5	Q04177	643 aa	Known RBP	4.81	□□□□□ -1.64
TRE1	YPL176C	ADE13	Q05911	482 aa	Known RBP	4.81	□□□□□ -1.64
TRE1	YPL176C	KAP95	Q06142	861 aa	Known RBP	4.81	□□□□□ -1.64
TRE1	YPL176C	SLP1	Q12232	587 aa		4.81	□□□□□ -1.64
TRE1	YPL176C	GRX6	Q12438	231 aa		4.81	□□□□□ -1.64
TRE1	YPL176C	YOR019W	Q99248	730 aa		4.81	□□□□□ -1.64
TRE1	YPL176C	SUI3	P09064	285 aa	Known RBP	4.8	□□□□□ -1.64
TRE1	YPL176C	CLB1	P24868	471 aa		4.8	□□□□□ -1.64
TRE1	YPL176C	CLB4	P24871	460 aa		4.8	□□□□□ -1.64
TRE1	YPL176C	PHO84	P25297	587 aa	Known RBP	4.8	□□□□□ -1.64
TRE1	YPL176C	CWH43	P25618	953 aa		4.8	□□□□□ -1.64
TRE1	YPL176C	EMC3	P36039	253 aa		4.8	□□□□□ -1.64
TRE1	YPL176C	ALG14	P38242	237 aa		4.8	□□□□□ -1.64
TRE1	YPL176C	STT3	P39007	718 aa	Known RBP	4.8	□□□□□ -1.64
TRE1	YPL176C	AIM10	P39965	576 aa	Known RBP	4.8	□□□□□ -1.64
TRE1	YPL176C	UTP18	P40362	594 aa	Predicted RBP	4.8	□□□□□ -1.64
TRE1	YPL176C	INA22	P40576	216 aa		4.8	□□□□□ -1.64
TRE1	YPL176C	TCB2	P48231	1178 aa		4.8	□□□□□ -1.64
TRE1	YPL176C	OGG1	P53397	376 aa	Predicted RBP	4.8	□□□□□ -1.64
TRE1	YPL176C	INP2	Q03824	705 aa		4.8	□□□□□ -1.64
TRE1	YPL176C	MGR3	Q04472	501 aa		4.8	□□□□□ -1.64
TRE1	YPL176C	YLR456W	Q06199	204 aa		4.8	□□□□□ -1.64
TRE1	YPL176C	RKR1	Q04781	1562 aa		4.8	□□□□□ -1.64
TRE1	YPL176C	ERS1	P17261	260 aa		4.8	□□□□□ -1.64
TRE1	YPL176C	SEC65	P29478	273 aa		4.8	□□□□□ -1.64
TRE1	YPL176C	SPC110	P32380	944 aa		4.8	□□□□□ -1.64
TRE1	YPL176C	DPH5	P32469	300 aa	Predicted RBP	4.8	□□□□□ -1.64
TRE1	YPL176C	YEL043W	P32618	956 aa		4.8	□□□□□ -1.64
TRE1	YPL176C	SAP190	P36123	1033 aa		4.8	□□□□□ -1.64
TRE1	YPL176C	ADH5	P38113	351 aa	Known RBP	4.8	□□□□□ -1.64
TRE1	YPL176C	YHR097C	P38809	366 aa	Known RBP	4.8	□□□□□ -1.64
TRE1	YPL176C	SHU2	P38957	223 aa		4.8	□□□□□ -1.64
TRE1	YPL176C	PXA1	P41909	870 aa		4.8	□□□□□ -1.64
TRE1	YPL176C	GCV2	P49095	1034 aa		4.8	□□□□□ -1.64
TRE1	YPL176C	EFM5	P53200	248 aa	Known RBP	4.8	□□□□□ -1.64
TRE1	YPL176C	DAM1	P53267	343 aa		4.8	□□□□□ -1.64
TRE1	YPL176C	LSC1	P53598	329 aa	Known RBP	4.8	□□□□□ -1.64
TRE1	YPL176C	HMI1	Q12039	706 aa		4.8	□□□□□ -1.64
TRE1	YPL176C	GET3	Q12154	354 aa	Known RBP	4.8	□□□□□ -1.64
TRE1	YPL176C	YIL002W-A	Q3E7Z5	69 aa		4.8	□□□□□ -1.64
TRE1	YPL176C	ADE8	P04161	214 aa		4.79	□□□□□ -1.64
TRE1	YPL176C	SWI6	P09959	803 aa		4.79	□□□□□ -1.64
TRE1	YPL176C	BET2	P20133	325 aa		4.79	□□□□□ -1.64
TRE1	YPL176C	YJU2	P28320	278 aa	Predicted RBP	4.79	□□□□□ -1.64
TRE1	YPL176C	KIP1	P28742	1111 aa		4.79	□□□□□ -1.64
TRE1	YPL176C	REC104	P33323	182 aa		4.79	□□□□□ -1.64
TRE1	YPL176C	TGL1	P34163	548 aa		4.79	□□□□□ -1.64
TRE1	YPL176C	CTF13	P35203	478 aa		4.79	□□□□□ -1.64
TRE1	YPL176C	HEL1	P36113	551 aa		4.79	□□□□□ -1.64
TRE1	YPL176C	APE3	P37302	537 aa	Known RBP	4.79	□□□□□ -1.64
TRE1	YPL176C	REI1	P38344	393 aa	Predicted RBP	4.79	□□□□□ -1.64
TRE1	YPL176C	MDR1	P53258	950 aa		4.79	□□□□□ -1.64
TRE1	YPL176C	YNL050C	P53952	270 aa		4.79	□□□□□ -1.64
TRE1	YPL176C	MMR1	Q06324	491 aa		4.79	□□□□□ -1.64
TRE1	YPL176C	ENV7	Q12003	364 aa		4.79	□□□□□ -1.64
TRE1	YPL176C	SPE3	Q12074	293 aa	Known RBP	4.79	□□□□□ -1.64
TRE1	YPL176C	CHS5	Q12114	671 aa	Known RBP	4.79	□□□□□ -1.64
TRE1	YPL176C	TY3A-G	Q12173	290 aa		4.79	□□□□□ -1.64
TRE1	YPL176C	GPM3	Q12326	303 aa		4.79	□□□□□ -1.64
TRE1	YPL176C	AVL9	Q12500	764 aa		4.79	□□□□□ -1.64
TRE1	YPL176C	TY3A-I	Q99219	290 aa		4.79	□□□□□ -1.64
TRE1	YPL176C	SGS1	P35187	1447 aa		4.79	□□□□□ -1.64
TRE1	YPL176C	PHO5	P00635	467 aa		4.79	□□□□□ -1.64
TRE1	YPL176C	PRP22	P24384	1145 aa	Known RBP	4.79	□□□□□ -1.64
TRE1	YPL176C	SPS22	P25380	463 aa		4.79	□□□□□ -1.64
TRE1	YPL176C	SDS22	P36047	338 aa		4.79	□□□□□ -1.64
TRE1	YPL176C	LYS9	P38999	446 aa		4.79	□□□□□ -1.64
TRE1	YPL176C	UME6	P39001	836 aa		4.79	□□□□□ -1.64
TRE1	YPL176C	HXT16	P47185	567 aa		4.79	□□□□□ -1.64
TRE1	YPL176C	YBL111C	Q3E7Y5	667 aa		4.79	□□□□□ -1.64
TRE1	YPL176C	ISN1	Q99312	450 aa		4.79	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 50.9 ms